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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180305832
OBJO01005241
243647
Bacillota
TTT
Lys
>WENV180305548
OBJO01000475
144612
Bacillota
TCT
Arg
>WENV180305792
OBJO01004108
235693
Bacillota
GGT
Thr
>WENV180305843
OBJO01005907
235693
Bacillota
GGT
Thr
>WENV180305957
OBJO01018702
246392
Bacillota
GTT
Asn
>WENV180305838
OBJO01005884
338152
Bacillota
TTC
Glu
>WENV180305531
OBJO01000413
242961
Bacillota
GGT
Thr
>WENV180305987
OBJO01024104
44854
Bacillota
TGA
Ser
>WENV180305979
OBJO01022223
144577
Bacillota
GAT
Ile
>WENV180305577
OBJO01000642
59312
Bacillota
CAG
Leu
>WENV180305556
OBJO01000518
59312
Bacillota
CAG
Leu
>WENV180305555
OBJO01000518
59312
Bacillota
CAG
Leu
>WENV180306026
OBJO01043888
238910
Bacillota
CTT
Lys
>WENV180305496
OBJO01000244
243119
Bacillota
CTT
Lys
>WENV180305657
OBJO01001540
338147
Bacillota
CTC
Glu
>WENV180305656
OBJO01001540
338147
Bacillota
CTC
Glu
>WENV180305536
OBJO01000436
338147
Bacillota
CTC
Glu
>WENV180305510
OBJO01000314
338147
Bacillota
CTC
Glu
>WENV180305892
OBJO01009085
235150
Bacillota
TGC
Ala
>WENV180305888
OBJO01008539
235150
Bacillota
TGC
Ala
>WENV180305482
OBJO01000221
152047
Bacillota
GGG
Pro
>WENV180305754
OBJO01003326
16820
Bacillota
GCT
Ser
>WENV180305806
OBJO01004607
235294
Bacillota
TGC
Ala
>WENV180305467
OBJO01000163
340802
Bacillota
TTG
Gln
>WENV180305601
OBJO01000882
152512
Bacillota
CCT
Arg
>WENV180305726
OBJO01002811
152459
Bacillota
GTC
Asp
>WENV180305723
OBJO01002811
152459
Bacillota
GTC
Asp
>WENV180305563
OBJO01000532
235114
Bacillota
TTT
Lys
>WENV180306015
OBJO01038991
144668
Bacillota
GTC
Asp
>WENV180305836
OBJO01005634
235091
Bacillota
CTT
Lys
>WENV180305749
OBJO01003218
235091
Bacillota
CTT
Lys
>WENV180306014
OBJO01038595
44859
Bacillota
AAG
Leu
>WENV180305633
OBJO01001162
44859
Bacillota
AAG
Leu
>WENV180305576
OBJO01000642
44859
Bacillota
AAG
Leu
>WENV180305543
OBJO01000462
16834
Bacillota
GCT
Ser
>WENV180305853
OBJO01006288
11034
Bacillota
GGA
Ser
>WENV180305716
OBJO01002781
235117
Bacillota
TAC
Val
>WENV180306005
OBJO01031950
247057
Bacillota
TGC
Ala
>WENV180305456
OBJO01000131
10943
Bacillota
GGA
Ser
>WENV180305454
OBJO01000131
10943
Bacillota
GGA
Ser
>WENV180305466
OBJO01000163
156937
Bacillota
GTG
His
>WENV180305764
OBJO01003492
243646
Bacillota
GTT
Asn
>WENV180305621
OBJO01001018
342736
Bacillota
TTG
Gln
>WENV180305891
OBJO01008940
37437
Bacillota
TAA
Leu
>WENV180305902
OBJO01009883
235079
Bacillota
GAA
Phe
>WENV180305718
OBJO01002781
235079
Bacillota
GAA
Phe
>WENV180306027
OBJO01044674
340265
Bacillota
GCC
Gly
>WENV180305978
OBJO01022223
235087
Bacillota
TGC
Ala
>WENV180305674
OBJO01001866
243612
Bacillota
TAC
Val
>WENV180305956
OBJO01018406
149041
Bacillota
GTC
Asp
>WENV180305637
OBJO01001217
152513
Bacillota
GAC
Val
>WENV180305730
OBJO01002875
338149
Bacillota
CTC
Glu
>WENV180305722
OBJO01002804
37551
Bacillota
CGA
Ser
>WENV180305727
OBJO01002811
81644
Bacillota
GAG
Leu
>WENV180305725
OBJO01002811
81644
Bacillota
GAG
Leu
>WENV180305450
OBJO01000112
152492
Bacillota
GGG
Pro
>WENV180305455
OBJO01000131
148268
Bacillota
CGG
Pro
>WENV180305453
OBJO01000131
148268
Bacillota
CGG
Pro
>WENV180305561
OBJO01000532
144610
Bacillota
GTG
His
>WENV180305977
OBJO01021883
411547
Bacillota
CTG
Gln
>WENV180305486
OBJO01000227
147684
Bacillota
ACG
Arg
>WENV180305854
OBJO01006366
342895
Bacillota
CAT
Met
>WENV180305821
OBJO01004924
254697
Bacillota
TTT
Lys
>WENV180305959
OBJO01018702
248683
Bacillota
TTT
Lys
>WENV180305693
OBJO01002224
243399
Bacillota
CCA
Trp
>WENV180305958
OBJO01018702
344183
Bacillota
CTG
Gln
>WENV180305951
OBJO01016795
241471
Bacillota
TGC
Ala
>WENV180305954
OBJO01018406
239832
Bacillota
TGT
Thr
>WENV180305624
OBJO01001081
239832
Bacillota
TGT
Thr
>WENV180305465
OBJO01000163
152151
Bacillota
TCT
Arg
>WENV180305961
OBJO01018702
239079
Bacillota
TAC
Val
>WENV180305793
OBJO01004108
152045
Bacillota
CAT
Met
>WENV180305960
OBJO01018702
243398
Bacillota
TTC
Glu
>WENV180305728
OBJO01002829
235142
Bacillota
CTT
Lys
>WENV180305608
OBJO01000917
235142
Bacillota
CTT
Lys
>WENV180306003
OBJO01030401
146741
Bacillota
CAT
Met
>WENV180305858
OBJO01006858
37588
Bacillota
TGA
Ser
>WENV180305701
OBJO01002472
148188
Bacillota
CCG
Arg
>WENV180305676
OBJO01001886
148188
Bacillota
CCG
Arg
>WENV180305480
OBJO01000205
152046
Bacillota
TCT
Arg
>WENV180305828
OBJO01005171
80612
Bacillota
GTA
Tyr
>WENV180305775
OBJO01003680
80612
Bacillota
GTA
Tyr
>WENV180305636
OBJO01001213
256380
Bacillota
>WENV180305949
OBJO01016318
235127
Bacillota
TTT
Lys
>WENV180305852
OBJO01006243
235127
Bacillota
TTT
Lys
>WENV180305743
OBJO01003126
235197
Bacillota
GTC
Asp
>WENV180305514
OBJO01000337
342664
Bacillota
>WENV180305694
OBJO01002224
152051
Bacillota
ACG
Arg
>WENV180305493
OBJO01000244
152051
Bacillota
ACG
Arg
>WENV180305599
OBJO01000821
243401
Bacillota
CGT
Thr
>WENV180305527
OBJO01000390
96872
Bacillota
>WENV180305946
OBJO01016318
147674
Bacillota
TCT
Arg
>WENV180305896
OBJO01009426
235124
Bacillota
TGG
Pro
>WENV180305937
OBJO01014653
338129
Bacillota
TGT
Thr
>WENV180305830
OBJO01005241
243613
Bacillota
GTG
His
>WENV180305899
OBJO01009626
144583
Bacillota
ACG
Arg
>WENV180305812
OBJO01004661
144652
Bacillota
GTC
Asp
>WENV180305900
OBJO01009883
235171
Bacillota
CCA
Trp
>WENV180305731
OBJO01002875
144621
Bacillota
GTT
Asn
>WENV180305970
OBJO01020763
235113
Bacillota
GAA
Phe
>WENV180305844
OBJO01005907
152491
Bacillota
CAT
Met
>WENV180305534
OBJO01000430
58712
Bacillota
CAG
Leu
>WENV180305966
OBJO01019365
352107
Bacillota
GCC
Gly
>WENV180305950
OBJO01016738
144594
Bacillota
CAC
Val
>WENV180305470
OBJO01000165
95563
Bacillota
GTA
Tyr
>WENV180305855
OBJO01006552
413657
Bacillota
CCC
Gly
>WENV180306004
OBJO01030401
163799
Bacillota
CAT
Met
>WENV180305741
OBJO01003034
238945
Bacillota
GCC
Gly
>WENV180305511
OBJO01000325
238945
Bacillota
GCC
Gly
>WENV180305427
OBJO01000080
238945
Bacillota
GCC
Gly
>WENV180305426
OBJO01000080
238945
Bacillota
GCC
Gly
>WENV180305719
OBJO01002781
249259
Bacillota
GCC
Gly
>WENV180305568
OBJO01000602
249259
Bacillota
GCC
Gly
>WENV180305831
OBJO01005241
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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