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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180329308
OBKV01000759
235097
Bacteroidota
TTT
Lys
>WENV180329618
OBKV01002810
235097
Bacteroidota
TTT
Lys
>WENV180329898
OBKV01009614
235097
Bacteroidota
TTT
Lys
>WENV180329993
OBKV01014053
235097
Bacteroidota
TTT
Lys
>WENV180329079
OBKV01000193
95987
Bacteroidota
CAA
Leu
>WENV180329453
OBKV01001391
95987
Bacteroidota
CAA
Leu
>WENV180329034
OBKV01000153
339412
Bacteroidota
GGT
Thr
>WENV180329779
OBKV01006131
339412
Bacteroidota
GGT
Thr
>WENV180329797
OBKV01006519
235102
Bacteroidota
CGT
Thr
>WENV180328934
OBKV01000073
267954
Bacteroidota
GCC
Gly
>WENV180330781
OBKV01273931
267954
Bacteroidota
GCC
Gly
>WENV180329641
OBKV01003271
144657
Bacteroidota
CGG
Pro
>WENV180328922
OBKV01000067
243025
Bacteroidota
CAT
Met
>WENV180329258
OBKV01000542
97336
Bacteroidota
CAG
Leu
>WENV180330522
OBKV01086251
338155
Bacteroidota
CTC
Glu
>WENV180329988
OBKV01013946
153993
Bacteroidota
GAT
Ile
>WENV180329773
OBKV01006062
339341
Bacteroidota
GGT
Thr
>WENV180330529
OBKV01088120
338486
Bacteroidota
CAT
Met
>WENV180329751
OBKV01005626
413663
Bacteroidota
CTG
Gln
>WENV180329298
OBKV01000692
413663
Bacteroidota
CTG
Gln
>WENV180329297
OBKV01000692
413663
Bacteroidota
CTG
Gln
>WENV180329798
OBKV01006546
415410
Bacteroidota
TTG
Gln
>WENV180329789
OBKV01006293
415410
Bacteroidota
TTG
Gln
>WENV180329598
OBKV01002572
136244
Bacteroidota
TAC
Val
>WENV180329597
OBKV01002572
136244
Bacteroidota
TAC
Val
>WENV180329596
OBKV01002572
136244
Bacteroidota
TAC
Val
>WENV180329304
OBKV01000726
136244
Bacteroidota
TAC
Val
>WENV180329780
OBKV01006131
237797
Bacteroidota
CCA
Trp
>WENV180329035
OBKV01000153
237797
Bacteroidota
CCA
Trp
>WENV180329328
OBKV01000819
20893
Bacteroidota
GGA
Ser
>WENV180329198
OBKV01000392
144695
Bacteroidota
CAT
Met
>WENV180329805
OBKV01006659
412479
Bacteroidota
TTG
Gln
>WENV180329051
OBKV01000173
412479
Bacteroidota
TTG
Gln
>WENV180330000
OBKV01014291
147147
Bacteroidota
GTG
His
>WENV180329165
OBKV01000305
147147
Bacteroidota
GTG
His
>WENV180329164
OBKV01000305
147147
Bacteroidota
GTG
His
>WENV180328849
OBKV01000023
147147
Bacteroidota
GTG
His
>WENV180328928
OBKV01000073
145504
Bacteroidota
TGT
Thr
>WENV180330142
OBKV01021016
338124
Bacteroidota
CCG
Arg
>WENV180329626
OBKV01002983
238121
Bacteroidota
CTT
Lys
>WENV180330098
OBKV01017925
338132
Bacteroidota
GCA
Cys
>WENV180329851
OBKV01007997
338132
Bacteroidota
GCA
Cys
>WENV180329741
OBKV01005356
338132
Bacteroidota
GCA
Cys
>WENV180329602
OBKV01002635
193809
Bacteroidota
CAT
Met
>WENV180329193
OBKV01000374
37076
Bacteroidota
TAA
Leu
>WENV180329049
OBKV01000173
37076
Bacteroidota
TAA
Leu
>WENV180330439
OBKV01062896
301449
Bacteroidota
CGG
Pro
>WENV180330283
OBKV01036962
301449
Bacteroidota
CGG
Pro
>WENV180330114
OBKV01019328
301449
Bacteroidota
CGG
Pro
>WENV180329700
OBKV01004480
301449
Bacteroidota
CGG
Pro
>WENV180329114
OBKV01000234
301449
Bacteroidota
CGG
Pro
>WENV180330789
OBKV01277276
144933
Bacteroidota
TCT
Arg
>WENV180329708
OBKV01004642
144933
Bacteroidota
TCT
Arg
>WENV180330472
OBKV01072088
303954
Bacteroidota
GCC
Gly
>WENV180330471
OBKV01072088
303954
Bacteroidota
GCC
Gly
>WENV180329754
OBKV01005640
144656
Bacteroidota
GTG
His
>WENV180330717
OBKV01207275
235207
Bacteroidota
CAT
Met
>WENV180330037
OBKV01014879
235207
Bacteroidota
CAT
Met
>WENV180329513
OBKV01001786
235207
Bacteroidota
CAT
Met
>WENV180329998
OBKV01014270
144596
Bacteroidota
GGC
Ala
>WENV180330036
OBKV01014864
80607
Bacteroidota
GTA
Tyr
>WENV180329541
OBKV01002069
113604
Bacteroidota
>WENV180329365
OBKV01000957
344769
Bacteroidota
CTC
Glu
>WENV180329364
OBKV01000957
344769
Bacteroidota
CTC
Glu
>WENV180329363
OBKV01000957
344769
Bacteroidota
CTC
Glu
>WENV180328959
OBKV01000088
344769
Bacteroidota
CTC
Glu
>WENV180328958
OBKV01000088
344769
Bacteroidota
CTC
Glu
>WENV180329756
OBKV01005715
16999
Bacteroidota
GGA
Ser
>WENV180329849
OBKV01007962
52358
Bacteroidota
TGA
Ser
>WENV180329747
OBKV01005508
52358
Bacteroidota
TGA
Ser
>WENV180329274
OBKV01000614
52358
Bacteroidota
TGA
Ser
>WENV180328886
OBKV01000040
154643
Bacteroidota
CAT
Met
>WENV180330795
OBKV01278873
144590
Bacteroidota
GTT
Asn
>WENV180329391
OBKV01001009
95559
Bacteroidota
TAG
Leu
>WENV180329455
OBKV01001401
419272
Bacteroidota
CTG
Gln
>WENV180329976
OBKV01013508
144655
Bacteroidota
GGC
Ala
>WENV180329936
OBKV01011319
144655
Bacteroidota
GGC
Ala
>WENV180330289
OBKV01037276
338164
Bacteroidota
TTC
Glu
>WENV180329316
OBKV01000772
95875
Bacteroidota
TAG
Leu
>WENV180329423
OBKV01001195
151121
Bacteroidota
CAT
Met
>WENV180329840
OBKV01007743
240012
Bacteroidota
CCC
Gly
>WENV180329991
OBKV01014028
44852
Bacteroidota
TAA
Leu
>WENV180330310
OBKV01039429
44852
Bacteroidota
TAA
Leu
>WENV180329808
OBKV01006800
150485
Bacteroidota
GTT
Asn
>WENV180329807
OBKV01006800
150485
Bacteroidota
GTT
Asn
>WENV180329712
OBKV01004772
338165
Bacteroidota
GGT
Thr
>WENV180330796
OBKV01278980
196394
Bacteroidota
GTC
Asp
>WENV180328965
OBKV01000088
196394
Bacteroidota
GTC
Asp
>WENV180328964
OBKV01000088
196394
Bacteroidota
GTC
Asp
>WENV180328963
OBKV01000088
196394
Bacteroidota
GTC
Asp
>WENV180330349
OBKV01044812
132360
Bacteroidota
GGG
Pro
>WENV180330270
OBKV01034750
425638
Bacteroidota
CTG
Gln
>WENV180329711
OBKV01004740
425638
Bacteroidota
CTG
Gln
>WENV180329650
OBKV01003328
425638
Bacteroidota
CTG
Gln
>WENV180329224
OBKV01000416
425638
Bacteroidota
CTG
Gln
>WENV180329850
OBKV01007962
19317
Bacteroidota
GGA
Ser
>WENV180330427
OBKV01058966
353927
Bacteroidota
TTC
Glu
>WENV180329072
OBKV01000186
353927
Bacteroidota
TTC
Glu
>WENV180330183
OBKV01024043
185921
Bacteroidota
GTC
Asp
>WENV180329764
OBKV01005830
185921
Bacteroidota
GTC
Asp
>WENV180328860
OBKV01000030
412236
Bacteroidota
CCC
Gly
>WENV180329006
OBKV01000125
414426
Bacteroidota
CTG
Gln
>WENV180330496
OBKV01076266
16224
Bacteroidota
GGA
Ser
>WENV180329921
OBKV01010661
16224
Bacteroidota
GGA
Ser
>WENV180330078
OBKV01016319
151960
Bacteroidota
GGC
Ala
>WENV180329707
OBKV01004631
16220
Bacteroidota
GGA
Ser
>WENV180329273
OBKV01000611
338125
Bacteroidota
CCT
Arg
>WENV180329257
OBKV01000540
235129
Bacteroidota
GCC
Gly
>WENV180329739
OBKV01005302
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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