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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180343611
OBLK01046692
254375
Actinomycetota
GGT
Thr
>WENV180343210
OBLK01000224
366446
Actinomycetota
GCA
Cys
>WENV180343349
OBLK01006403
413566
Actinomycetota
CCC
Gly
>WENV180344084
OBLK01221976
390230
Actinomycetota
CCG
Arg
>WENV180343344
OBLK01005339
304559
Actinomycetota
GCC
Gly
>WENV180343458
OBLK01020146
304559
Actinomycetota
GCC
Gly
>WENV180343205
OBLK01000193
80643
Actinomycetota
CAG
Leu
>WENV180343249
OBLK01000507
145064
Actinomycetota
TGG
Pro
>WENV180343233
OBLK01000375
8521
Actinomycetota
GCT
Ser
>WENV180343589
OBLK01042941
289919
Actinomycetota
GGC
Ala
>WENV180343234
OBLK01000375
243603
Actinomycetota
ACG
Arg
>WENV180344112
OBLK01233284
148837
Actinomycetota
CAT
Met
>WENV180343209
OBLK01000224
237342
Actinomycetota
GCC
Gly
>WENV180343364
OBLK01008021
425058
Actinomycetota
GCA
Cys
>WENV180343216
OBLK01000247
239275
Actinomycetota
TTC
Glu
>WENV180343431
OBLK01015649
278066
Actinomycetota
CCT
Arg
>WENV180343270
OBLK01001077
278066
Actinomycetota
CCT
Arg
>WENV180343638
OBLK01052253
148202
Actinomycetota
GAT
Ile
>WENV180343808
OBLK01098644
389344
Actinomycetota
CCG
Arg
>WENV180343394
OBLK01010873
149059
Actinomycetota
CGC
Ala
>WENV180344116
OBLK01234411
339524
Actinomycetota
CCG
Arg
>WENV180344184
OBLK01263776
432565
Actinomycetota
TCC
Gly
>WENV180343244
OBLK01000471
314786
Actinomycetota
CTC
Glu
>WENV180343268
OBLK01000965
235625
Actinomycetota
GGC
Ala
>WENV180343892
OBLK01130119
307646
Actinomycetota
ACG
Arg
>WENV180343422
OBLK01014360
63783
Actinomycetota
CAG
Leu
>WENV180343188
OBLK01000111
411674
Actinomycetota
TTG
Gln
>WENV180343305
OBLK01002576
179547
Actinomycetota
GGG
Pro
>WENV180343758
OBLK01081352
81107
Actinomycetota
CAG
Leu
>WENV180343334
OBLK01004066
269372
Actinomycetota
CCA
Trp
>WENV180343220
OBLK01000286
144909
Actinomycetota
CAA
Leu
>WENV180344145
OBLK01246355
47989
Actinomycetota
GAG
Leu
>WENV180343562
OBLK01036984
179447
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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