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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180418237
OBVJ01000925
24650
Bacillota
TAA
Leu
>WENV180418378
OBVJ01005298
243647
Bacillota
TTT
Lys
>WENV180418418
OBVJ01013923
243647
Bacillota
TTT
Lys
>WENV180418308
OBVJ01001772
196621
Bacillota
GTC
Asp
>WENV180418317
OBVJ01001926
196621
Bacillota
GTC
Asp
>WENV180418426
OBVJ01016390
196621
Bacillota
GTC
Asp
>WENV180418393
OBVJ01009534
361659
Bacillota
GCC
Gly
>WENV180418153
OBVJ01000447
16842
Bacillota
CGA
Ser
>WENV180418246
OBVJ01000976
144612
Bacillota
TCT
Arg
>WENV180418042
OBVJ01000138
267649
Bacillota
TAC
Val
>WENV180418040
OBVJ01000138
267649
Bacillota
TAC
Val
>WENV180418283
OBVJ01001441
235098
Bacillota
GAC
Val
>WENV180418271
OBVJ01001217
235098
Bacillota
GAC
Val
>WENV180418281
OBVJ01001433
44854
Bacillota
TGA
Ser
>WENV180418440
OBVJ01018493
235154
Bacillota
GTT
Asn
>WENV180418318
OBVJ01001926
304022
Bacillota
GCC
Gly
>WENV180418316
OBVJ01001926
304022
Bacillota
GCC
Gly
>WENV180418251
OBVJ01001018
304022
Bacillota
GCC
Gly
>WENV180418441
OBVJ01019558
97943
Bacillota
GTA
Tyr
>WENV180418392
OBVJ01009534
114359
Bacillota
TAG
Leu
>WENV180418477
OBVJ01042472
235137
Bacillota
TGC
Ala
>WENV180418448
OBVJ01020098
338143
Bacillota
CTC
Glu
>WENV180418235
OBVJ01000925
144668
Bacillota
GTC
Asp
>WENV180418255
OBVJ01001069
429429
Bacillota
CCA
Trp
>WENV180418380
OBVJ01006068
16834
Bacillota
GCT
Ser
>WENV180418353
OBVJ01003130
11034
Bacillota
GGA
Ser
>WENV180418382
OBVJ01006937
114002
Bacillota
CAA
Leu
>WENV180418262
OBVJ01001097
37437
Bacillota
TAA
Leu
>WENV180418427
OBVJ01016390
235079
Bacillota
GAA
Phe
>WENV180418315
OBVJ01001926
235079
Bacillota
GAA
Phe
>WENV180418377
OBVJ01005298
296878
Bacillota
GTT
Asn
>WENV180418243
OBVJ01000972
296878
Bacillota
GTT
Asn
>WENV180418240
OBVJ01000954
296878
Bacillota
GTT
Asn
>WENV180418245
OBVJ01000972
243612
Bacillota
TAC
Val
>WENV180418242
OBVJ01000954
243612
Bacillota
TAC
Val
>WENV180418267
OBVJ01001193
338149
Bacillota
CTC
Glu
>WENV180418342
OBVJ01002662
245298
Bacillota
CGG
Pro
>WENV180418331
OBVJ01002240
147135
Bacillota
ACG
Arg
>WENV180418341
OBVJ01002662
411547
Bacillota
CTG
Gln
>WENV180418276
OBVJ01001342
411547
Bacillota
CTG
Gln
>WENV180418282
OBVJ01001433
4624
Bacillota
GCT
Ser
>WENV180418444
OBVJ01019558
263765
Bacillota
TAC
Val
>WENV180418351
OBVJ01002992
342895
Bacillota
CAT
Met
>WENV180418169
OBVJ01000559
342895
Bacillota
CAT
Met
>WENV180418046
OBVJ01000142
18852
Bacillota
GCT
Ser
>WENV180418420
OBVJ01014288
235095
Bacillota
GGT
Thr
>WENV180418309
OBVJ01001772
235095
Bacillota
GGT
Thr
>WENV180418437
OBVJ01018054
194150
Bacillota
TGG
Pro
>WENV180418455
OBVJ01024825
198159
Bacillota
CAT
Met
>WENV180418314
OBVJ01001869
411549
Bacillota
TTG
Gln
>WENV180418472
OBVJ01039136
59296
Bacillota
AAG
Leu
>WENV180418250
OBVJ01001014
148188
Bacillota
CCG
Arg
>WENV180418139
OBVJ01000395
80612
Bacillota
GTA
Tyr
>WENV180418431
OBVJ01016462
235127
Bacillota
TTT
Lys
>WENV180418209
OBVJ01000758
235127
Bacillota
TTT
Lys
>WENV180418258
OBVJ01001097
235197
Bacillota
GTC
Asp
>WENV180418130
OBVJ01000370
235197
Bacillota
GTC
Asp
>WENV180418376
OBVJ01005298
368876
Bacillota
GCC
Gly
>WENV180418374
OBVJ01004889
368876
Bacillota
GCC
Gly
>WENV180418260
OBVJ01001097
368876
Bacillota
GCC
Gly
>WENV180418233
OBVJ01000890
368876
Bacillota
GCC
Gly
>WENV180418206
OBVJ01000758
147674
Bacillota
TCT
Arg
>WENV180418394
OBVJ01009534
411739
Bacillota
TCC
Gly
>WENV180418467
OBVJ01034158
235638
Bacillota
GAA
Phe
>WENV180418332
OBVJ01002347
235124
Bacillota
TGG
Pro
>WENV180418399
OBVJ01009534
237963
Bacillota
TTT
Lys
>WENV180418395
OBVJ01009534
201667
Bacillota
TCT
Arg
>WENV180418215
OBVJ01000785
338129
Bacillota
TGT
Thr
>WENV180418397
OBVJ01009534
279635
Bacillota
GTG
His
>WENV180418416
OBVJ01013923
243613
Bacillota
GTG
His
>WENV180418230
OBVJ01000872
144583
Bacillota
ACG
Arg
>WENV180418307
OBVJ01001772
235171
Bacillota
CCA
Trp
>WENV180418268
OBVJ01001193
144621
Bacillota
GTT
Asn
>WENV180418387
OBVJ01007330
152491
Bacillota
CAT
Met
>WENV180418443
OBVJ01019558
353527
Bacillota
TTC
Glu
>WENV180418220
OBVJ01000819
58712
Bacillota
CAG
Leu
>WENV180418336
OBVJ01002484
245296
Bacillota
CCC
Gly
>WENV180418360
OBVJ01003965
272992
Bacillota
CTT
Lys
>WENV180418386
OBVJ01007330
281472
Bacillota
GGT
Thr
>WENV180418439
OBVJ01018054
178024
Bacillota
TCT
Arg
>WENV180418161
OBVJ01000490
144594
Bacillota
CAC
Val
>WENV180418120
OBVJ01000332
413657
Bacillota
CCC
Gly
>WENV180418417
OBVJ01013923
343027
Bacillota
TTG
Gln
>WENV180418270
OBVJ01001207
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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