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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180467249
OBYI01000059
235097
Bacteroidota
TTT
Lys
>WENV180467304
OBYI01000095
235097
Bacteroidota
TTT
Lys
>WENV180467207
OBYI01000027
235102
Bacteroidota
CGT
Thr
>WENV180467308
OBYI01000096
144657
Bacteroidota
CGG
Pro
>WENV180467428
OBYI01000289
144657
Bacteroidota
CGG
Pro
>WENV180467134
OBYI01000002
338155
Bacteroidota
CTC
Glu
>WENV180467276
OBYI01000079
338155
Bacteroidota
CTC
Glu
>WENV180467143
OBYI01000005
343138
Bacteroidota
CCT
Arg
>WENV180467168
OBYI01000011
58715
Bacteroidota
GAG
Leu
>WENV180467362
OBYI01000151
58715
Bacteroidota
GAG
Leu
>WENV180467543
OBYI01000583
46165
Bacteroidota
TGA
Ser
>WENV180467159
OBYI01000009
95618
Bacteroidota
TAG
Leu
>WENV180467551
OBYI01000633
338486
Bacteroidota
CAT
Met
>WENV180467400
OBYI01000217
338486
Bacteroidota
CAT
Met
>WENV180467227
OBYI01000040
338486
Bacteroidota
CAT
Met
>WENV180467226
OBYI01000040
338486
Bacteroidota
CAT
Met
>WENV180467230
OBYI01000041
415410
Bacteroidota
TTG
Gln
>WENV180467633
OBYI01002188
411543
Bacteroidota
CTG
Gln
>WENV180467246
OBYI01000057
411543
Bacteroidota
CTG
Gln
>WENV180467361
OBYI01000151
59689
Bacteroidota
CAG
Leu
>WENV180467327
OBYI01000111
59689
Bacteroidota
CAG
Leu
>WENV180467539
OBYI01000570
20893
Bacteroidota
GGA
Ser
>WENV180467446
OBYI01000331
20893
Bacteroidota
GGA
Ser
>WENV180467398
OBYI01000215
20893
Bacteroidota
GGA
Ser
>WENV180467265
OBYI01000070
235182
Bacteroidota
>WENV180467197
OBYI01000023
272983
Bacteroidota
CGT
Thr
>WENV180467220
OBYI01000034
338124
Bacteroidota
CCG
Arg
>WENV180467426
OBYI01000288
235203
Bacteroidota
TTT
Lys
>WENV180467241
OBYI01000051
235203
Bacteroidota
TTT
Lys
>WENV180467339
OBYI01000115
238121
Bacteroidota
CTT
Lys
>WENV180467338
OBYI01000115
238121
Bacteroidota
CTT
Lys
>WENV180467139
OBYI01000004
238121
Bacteroidota
CTT
Lys
>WENV180467138
OBYI01000004
238121
Bacteroidota
CTT
Lys
>WENV180467281
OBYI01000082
126641
Bacteroidota
TAC
Val
>WENV180467280
OBYI01000082
126641
Bacteroidota
TAC
Val
>WENV180467422
OBYI01000275
338132
Bacteroidota
GCA
Cys
>WENV180467252
OBYI01000062
338132
Bacteroidota
GCA
Cys
>WENV180467172
OBYI01000012
338132
Bacteroidota
GCA
Cys
>WENV180467146
OBYI01000006
338132
Bacteroidota
GCA
Cys
>WENV180467346
OBYI01000126
144688
Bacteroidota
CAT
Met
>WENV180467340
OBYI01000115
45423
Bacteroidota
TGA
Ser
>WENV180467218
OBYI01000031
193809
Bacteroidota
CAT
Met
>WENV180467131
OBYI01000001
181746
Bacteroidota
GGC
Ala
>WENV180467272
OBYI01000077
58714
Bacteroidota
CAA
Leu
>WENV180467576
OBYI01000746
301449
Bacteroidota
CGG
Pro
>WENV180467211
OBYI01000028
301449
Bacteroidota
CGG
Pro
>WENV180467262
OBYI01000068
144933
Bacteroidota
TCT
Arg
>WENV180467242
OBYI01000052
144933
Bacteroidota
TCT
Arg
>WENV180467185
OBYI01000016
144933
Bacteroidota
TCT
Arg
>WENV180467314
OBYI01000101
144656
Bacteroidota
GTG
His
>WENV180467526
OBYI01000506
235207
Bacteroidota
CAT
Met
>WENV180467418
OBYI01000252
235207
Bacteroidota
CAT
Met
>WENV180467357
OBYI01000149
144659
Bacteroidota
GTG
His
>WENV180467356
OBYI01000149
144659
Bacteroidota
GTG
His
>WENV180467429
OBYI01000289
235180
Bacteroidota
CCA
Trp
>WENV180467689
OBYI01011748
80607
Bacteroidota
GTA
Tyr
>WENV180467384
OBYI01000187
80607
Bacteroidota
GTA
Tyr
>WENV180467268
OBYI01000074
80607
Bacteroidota
GTA
Tyr
>WENV180467137
OBYI01000003
80607
Bacteroidota
GTA
Tyr
>WENV180467396
OBYI01000210
80614
Bacteroidota
>WENV180467373
OBYI01000177
80614
Bacteroidota
>WENV180467351
OBYI01000130
80614
Bacteroidota
>WENV180467255
OBYI01000063
80614
Bacteroidota
>WENV180467317
OBYI01000104
52358
Bacteroidota
TGA
Ser
>WENV180467285
OBYI01000084
52358
Bacteroidota
TGA
Ser
>WENV180467284
OBYI01000084
52358
Bacteroidota
TGA
Ser
>WENV180467279
OBYI01000081
52358
Bacteroidota
TGA
Ser
>WENV180467189
OBYI01000017
52358
Bacteroidota
TGA
Ser
>WENV180467188
OBYI01000017
52358
Bacteroidota
TGA
Ser
>WENV180467270
OBYI01000074
144590
Bacteroidota
GTT
Asn
>WENV180467269
OBYI01000074
144590
Bacteroidota
GTT
Asn
>WENV180467354
OBYI01000142
95559
Bacteroidota
TAG
Leu
>WENV180467215
OBYI01000029
419272
Bacteroidota
CTG
Gln
>WENV180467260
OBYI01000067
144655
Bacteroidota
GGC
Ala
>WENV180467145
OBYI01000005
338164
Bacteroidota
TTC
Glu
>WENV180467144
OBYI01000005
338164
Bacteroidota
TTC
Glu
>WENV180467273
OBYI01000077
95875
Bacteroidota
TAG
Leu
>WENV180467156
OBYI01000008
95875
Bacteroidota
TAG
Leu
>WENV180467257
OBYI01000066
338314
Bacteroidota
CCT
Arg
>WENV180467548
OBYI01000599
240012
Bacteroidota
CCC
Gly
>WENV180467302
OBYI01000092
240012
Bacteroidota
CCC
Gly
>WENV180467283
OBYI01000083
147439
Bacteroidota
TCT
Arg
>WENV180467225
OBYI01000038
411550
Bacteroidota
CTG
Gln
>WENV180467224
OBYI01000038
411550
Bacteroidota
CTG
Gln
>WENV180467289
OBYI01000086
338165
Bacteroidota
GGT
Thr
>WENV180467625
OBYI01001820
19528
Bacteroidota
GGA
Ser
>WENV180467245
OBYI01000057
132360
Bacteroidota
GGG
Pro
>WENV180467214
OBYI01000029
132360
Bacteroidota
GGG
Pro
>WENV180467634
OBYI01002235
425638
Bacteroidota
CTG
Gln
>WENV180467370
OBYI01000170
425638
Bacteroidota
CTG
Gln
>WENV180467274
OBYI01000079
239647
Bacteroidota
TTT
Lys
>WENV180467231
OBYI01000042
239647
Bacteroidota
TTT
Lys
>WENV180467303
OBYI01000094
19317
Bacteroidota
GGA
Ser
>WENV180467190
OBYI01000017
19317
Bacteroidota
GGA
Ser
>WENV180467331
OBYI01000112
185921
Bacteroidota
GTC
Asp
>WENV180467316
OBYI01000103
185921
Bacteroidota
GTC
Asp
>WENV180467256
OBYI01000063
185921
Bacteroidota
GTC
Asp
>WENV180467177
OBYI01000014
185921
Bacteroidota
GTC
Asp
>WENV180467397
OBYI01000212
23696
Bacteroidota
GCT
Ser
>WENV180467355
OBYI01000147
16224
Bacteroidota
GGA
Ser
>WENV180467216
OBYI01000029
16220
Bacteroidota
GGA
Ser
>WENV180467239
OBYI01000049
338125
Bacteroidota
CCT
Arg
>WENV180467163
OBYI01000010
338125
Bacteroidota
CCT
Arg
>WENV180467432
OBYI01000291
235129
Bacteroidota
GCC
Gly
>WENV180467430
OBYI01000291
235129
Bacteroidota
GCC
Gly
>WENV180467360
OBYI01000151
235129
Bacteroidota
GCC
Gly
>WENV180467350
OBYI01000127
235129
Bacteroidota
GCC
Gly
>WENV180467348
OBYI01000127
235129
Bacteroidota
GCC
Gly
>WENV180467166
OBYI01000011
235129
Bacteroidota
GCC
Gly
>WENV180467277
OBYI01000080
411629
Bacteroidota
TTG
Gln
>WENV180467195
OBYI01000020
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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