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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180479998
OBZD01000039
267649
Bacillota
TAC
Val
>WENV180480000
OBZD01000039
267649
Bacillota
TAC
Val
>WENV180480114
OBZD01000118
249259
Bacillota
GCC
Gly
>WENV180480240
OBZD01000360
37213
Bacillota
TGA
Ser
>WENV180480264
OBZD01000457
238945
Bacillota
GCC
Gly
>WENV180480312
OBZD01000710
344183
Bacillota
CTG
Gln
>WENV180480323
OBZD01000720
80612
Bacillota
GTA
Tyr
>WENV180480371
OBZD01001082
147684
Bacillota
ACG
Arg
>WENV180480379
OBZD01001222
411547
Bacillota
CTG
Gln
>WENV180480389
OBZD01001339
44854
Bacillota
TGA
Ser
>WENV180480390
OBZD01001339
4624
Bacillota
GCT
Ser
>WENV180480399
OBZD01001360
235127
Bacillota
TTT
Lys
>WENV180480396
OBZD01001360
147674
Bacillota
TCT
Arg
>WENV180480409
OBZD01001493
144594
Bacillota
CAC
Val
>WENV180480414
OBZD01001538
119513
Bacillota
CAA
Leu
>WENV180480427
OBZD01001805
152492
Bacillota
GGG
Pro
>WENV180480429
OBZD01001892
144621
Bacillota
GTT
Asn
>WENV180480435
OBZD01001908
340802
Bacillota
TTG
Gln
>WENV180480434
OBZD01001908
144610
Bacillota
GTG
His
>WENV180480433
OBZD01001908
157635
Bacillota
TCT
Arg
>WENV180480443
OBZD01001953
338128
Bacillota
TTC
Glu
>WENV180480456
OBZD01002358
235079
Bacillota
GAA
Phe
>WENV180480457
OBZD01002358
249259
Bacillota
GCC
Gly
>WENV180480461
OBZD01002423
245298
Bacillota
CGG
Pro
>WENV180480460
OBZD01002423
411547
Bacillota
CTG
Gln
>WENV180480462
OBZD01002509
148188
Bacillota
CCG
Arg
>WENV180480463
OBZD01002510
411549
Bacillota
TTG
Gln
>WENV180480480
OBZD01003157
338149
Bacillota
CTC
Glu
>WENV180480483
OBZD01003307
144612
Bacillota
TCT
Arg
>WENV180480522
OBZD01004668
235124
Bacillota
TGG
Pro
>WENV180480525
OBZD01004783
245296
Bacillota
CCC
Gly
>WENV180480531
OBZD01004924
254697
Bacillota
TTT
Lys
>WENV180480540
OBZD01005168
268272
Bacillota
TGC
Ala
>WENV180480544
OBZD01005345
235095
Bacillota
GGT
Thr
>WENV180480542
OBZD01005345
235171
Bacillota
CCA
Trp
>WENV180480546
OBZD01005468
338129
Bacillota
TGT
Thr
>WENV180480553
OBZD01005577
246023
Bacillota
TGC
Ala
>WENV180480554
OBZD01005695
338143
Bacillota
CTC
Glu
>WENV180480563
OBZD01006364
80612
Bacillota
GTA
Tyr
>WENV180480580
OBZD01008088
11034
Bacillota
GGA
Ser
>WENV180480582
OBZD01008194
338131
Bacillota
GCC
Gly
>WENV180480591
OBZD01008574
152491
Bacillota
CAT
Met
>WENV180480593
OBZD01009321
235137
Bacillota
TGC
Ala
>WENV180480618
OBZD01011757
58712
Bacillota
CAG
Leu
>WENV180480627
OBZD01012361
157838
Bacillota
GTC
Asp
>WENV180480633
OBZD01013477
341763
Bacillota
CTC
Glu
>WENV180480638
OBZD01013871
338143
Bacillota
CTC
Glu
>WENV180480641
OBZD01014962
37269
Bacillota
TGA
Ser
>WENV180480642
OBZD01014962
10680
Bacillota
GGA
Ser
>WENV180480648
OBZD01015097
144668
Bacillota
GTC
Asp
>WENV180480654
OBZD01015977
144583
Bacillota
ACG
Arg
>WENV180480671
OBZD01019197
249259
Bacillota
GCC
Gly
>WENV180480674
OBZD01019382
153911
Bacillota
GAT
Ile
>WENV180480676
OBZD01020154
235137
Bacillota
TGC
Ala
>WENV180480682
OBZD01022401
235154
Bacillota
GTT
Asn
>WENV180480683
OBZD01022994
235091
Bacillota
CTT
Lys
>WENV180480684
OBZD01023546
16842
Bacillota
CGA
Ser
>WENV180480696
OBZD01025345
243647
Bacillota
TTT
Lys
>WENV180480698
OBZD01025345
243612
Bacillota
TAC
Val
>WENV180480704
OBZD01026901
235095
Bacillota
GGT
Thr
>WENV180480711
OBZD01028387
347827
Bacillota
TTC
Glu
>WENV180480729
OBZD01033139
245386
Bacillota
CCA
Trp
>WENV180480738
OBZD01036577
247057
Bacillota
TGC
Ala
>WENV180480739
OBZD01036699
235098
Bacillota
GAC
Val
>WENV180480742
OBZD01037791
235079
Bacillota
GAA
Phe
>WENV180480748
OBZD01041445
235134
Bacillota
GAA
Phe
>WENV180480749
OBZD01041445
240017
Bacillota
GCC
Gly
>WENV180480755
OBZD01042474
235137
Bacillota
TGC
Ala
>WENV180480760
OBZD01043979
37437
Bacillota
TAA
Leu
>WENV180480759
OBZD01043979
342061
Bacillota
GCA
Cys
>WENV180480765
OBZD01045931
162445
Bacillota
CAT
Met
>WENV180480771
OBZD01051122
338152
Bacillota
TTC
Glu
>WENV180480777
OBZD01063548
411585
Bacillota
GCA
Cys
>WENV180480786
OBZD01071708
418445
Bacillota
TCC
Gly
>WENV180480789
OBZD01072455
235197
Bacillota
GTC
Asp
>WENV180480790
OBZD01073892
235150
Bacillota
TGC
Ala
>WENV180480799
OBZD01077236
239832
Bacillota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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