This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180575685
OCLY01002800
196621
Bacillota
GTC
Asp
>WENV180575925
OCLY01033650
196621
Bacillota
GTC
Asp
>WENV180575919
OCLY01030919
202812
Bacillota
CAT
Met
>WENV180575625
OCLY01001108
144612
Bacillota
TCT
Arg
>WENV180575831
OCLY01013581
267556
Bacillota
TAC
Val
>WENV180576014
OCLY01078343
339890
Bacillota
TTG
Gln
>WENV180575710
OCLY01004320
235098
Bacillota
GAC
Val
>WENV180575720
OCLY01005222
235098
Bacillota
GAC
Val
>WENV180575864
OCLY01018475
235098
Bacillota
GAC
Val
>WENV180575600
OCLY01000688
340263
Bacillota
TTC
Glu
>WENV180575551
OCLY01000450
340263
Bacillota
TTC
Glu
>WENV180575923
OCLY01031343
23769
Bacillota
TAA
Leu
>WENV180575628
OCLY01001170
44854
Bacillota
TGA
Ser
>WENV180575683
OCLY01002795
425593
Bacillota
CCC
Gly
>WENV180575780
OCLY01009013
37549
Bacillota
TAA
Leu
>WENV180575593
OCLY01000688
148348
Bacillota
GTC
Asp
>WENV180576111
OCLY01138293
304022
Bacillota
GCC
Gly
>WENV180575889
OCLY01023807
304022
Bacillota
GCC
Gly
>WENV180575669
OCLY01002099
304022
Bacillota
GCC
Gly
>WENV180575789
OCLY01010295
246023
Bacillota
TGC
Ala
>WENV180575804
OCLY01011316
307003
Bacillota
TGC
Ala
>WENV180575716
OCLY01004938
307003
Bacillota
TGC
Ala
>WENV180575866
OCLY01019408
193585
Bacillota
CGG
Pro
>WENV180575503
OCLY01000322
239080
Bacillota
CTG
Gln
>WENV180576122
OCLY01138438
238910
Bacillota
CTT
Lys
>WENV180575786
OCLY01010159
152047
Bacillota
GGG
Pro
>WENV180575990
OCLY01067369
340802
Bacillota
TTG
Gln
>WENV180575771
OCLY01008323
152512
Bacillota
CCT
Arg
>WENV180575801
OCLY01011307
152459
Bacillota
GTC
Asp
>WENV180575839
OCLY01014726
341763
Bacillota
CTC
Glu
>WENV180576090
OCLY01133918
144668
Bacillota
GTC
Asp
>WENV180575950
OCLY01043478
429429
Bacillota
CCA
Trp
>WENV180575676
OCLY01002586
11034
Bacillota
GGA
Ser
>WENV180575924
OCLY01033650
235117
Bacillota
TAC
Val
>WENV180575594
OCLY01000688
239076
Bacillota
GAA
Phe
>WENV180575395
OCLY01000112
243646
Bacillota
GTT
Asn
>WENV180575396
OCLY01000112
235697
Bacillota
GTT
Asn
>WENV180575750
OCLY01007127
342736
Bacillota
TTG
Gln
>WENV180575888
OCLY01023807
235079
Bacillota
GAA
Phe
>WENV180575860
OCLY01017933
296878
Bacillota
GTT
Asn
>WENV180575394
OCLY01000112
296878
Bacillota
GTT
Asn
>WENV180575590
OCLY01000666
340265
Bacillota
GCC
Gly
>WENV180575443
OCLY01000187
340265
Bacillota
GCC
Gly
>WENV180575664
OCLY01001928
338149
Bacillota
CTC
Glu
>WENV180575661
OCLY01001843
338149
Bacillota
CTC
Glu
>WENV180575746
OCLY01006885
245298
Bacillota
CGG
Pro
>WENV180575619
OCLY01000988
245298
Bacillota
CGG
Pro
>WENV180575998
OCLY01072446
37269
Bacillota
TGA
Ser
>WENV180575927
OCLY01034562
81644
Bacillota
GAG
Leu
>WENV180575803
OCLY01011307
81644
Bacillota
GAG
Leu
>WENV180575794
OCLY01010875
413152
Bacillota
TCC
Gly
>WENV180575832
OCLY01013581
162445
Bacillota
CAT
Met
>WENV180575989
OCLY01067369
144610
Bacillota
GTG
His
>WENV180575745
OCLY01006885
411547
Bacillota
CTG
Gln
>WENV180575655
OCLY01001660
411547
Bacillota
CTG
Gln
>WENV180575629
OCLY01001170
4624
Bacillota
GCT
Ser
>WENV180575757
OCLY01007674
235095
Bacillota
GGT
Thr
>WENV180575779
OCLY01009013
419945
Bacillota
GCA
Cys
>WENV180575618
OCLY01000899
304759
Bacillota
TAC
Val
>WENV180575778
OCLY01009010
411549
Bacillota
TTG
Gln
>WENV180575861
OCLY01017933
243398
Bacillota
TTC
Glu
>WENV180575777
OCLY01008745
37588
Bacillota
TGA
Ser
>WENV180575728
OCLY01005669
148188
Bacillota
CCG
Arg
>WENV180575937
OCLY01036900
298639
Bacillota
GTT
Asn
>WENV180576106
OCLY01138177
80612
Bacillota
GTA
Tyr
>WENV180575654
OCLY01001636
80612
Bacillota
GTA
Tyr
>WENV180575791
OCLY01010720
152051
Bacillota
ACG
Arg
>WENV180575897
OCLY01027724
298620
Bacillota
CAT
Met
>WENV180575652
OCLY01001599
235124
Bacillota
TGG
Pro
>WENV180575729
OCLY01005876
338129
Bacillota
TGT
Thr
>WENV180575913
OCLY01030238
144583
Bacillota
ACG
Arg
>WENV180575735
OCLY01006275
235171
Bacillota
CCA
Trp
>WENV180575684
OCLY01002800
235171
Bacillota
CCA
Trp
>WENV180576120
OCLY01138411
144621
Bacillota
GTT
Asn
>WENV180575665
OCLY01001928
144621
Bacillota
GTT
Asn
>WENV180575662
OCLY01001843
144621
Bacillota
GTT
Asn
>WENV180575707
OCLY01003855
58712
Bacillota
CAG
Leu
>WENV180575653
OCLY01001636
58712
Bacillota
CAG
Leu
>WENV180575678
OCLY01002631
245296
Bacillota
CCC
Gly
>WENV180575623
OCLY01001090
245296
Bacillota
CCC
Gly
>WENV180576108
OCLY01138254
272992
Bacillota
CTT
Lys
>WENV180575550
OCLY01000450
239078
Bacillota
TTT
Lys
>WENV180575903
OCLY01028346
299139
Bacillota
TGC
Ala
>WENV180576022
OCLY01082005
384950
Bacillota
GCC
Gly
>WENV180575948
OCLY01042342
338131
Bacillota
GCC
Gly
>WENV180575920
OCLY01030919
338128
Bacillota
TTC
Glu
>WENV180575638
OCLY01001304
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK