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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180619270
OCQB01002662
235146
Actinomycetota
CGT
Thr
>WENV180619437
OCQB01004036
235347
Actinomycetota
GGC
Ala
>WENV180619438
OCQB01004036
235347
Actinomycetota
GGC
Ala
>WENV180618464
OCQB01000142
144589
Actinomycetota
ACG
Arg
>WENV180618465
OCQB01000142
144589
Actinomycetota
ACG
Arg
>WENV180619386
OCQB01003528
201717
Actinomycetota
CTT
Lys
>WENV180619137
OCQB01001636
144600
Actinomycetota
TGG
Pro
>WENV180619252
OCQB01002476
235194
Actinomycetota
GTG
His
>WENV180619014
OCQB01001080
158720
Actinomycetota
ACG
Arg
>WENV180618990
OCQB01001015
305322
Actinomycetota
TGC
Ala
>WENV180619693
OCQB01009104
411601
Actinomycetota
CCC
Gly
>WENV180618976
OCQB01000946
144826
Actinomycetota
GGG
Pro
>WENV180618927
OCQB01000812
23370
Actinomycetota
GCT
Ser
>WENV180618989
OCQB01001015
174149
Actinomycetota
GAT
Ile
>WENV180618876
OCQB01000673
338239
Actinomycetota
TTC
Glu
>WENV180618500
OCQB01000173
235101
Actinomycetota
TTT
Lys
>WENV180619143
OCQB01001700
121510
Actinomycetota
TAA
Leu
>WENV180619282
OCQB01002689
356045
Actinomycetota
GAC
Val
>WENV180618618
OCQB01000296
145423
Actinomycetota
TCT
Arg
>WENV180619140
OCQB01001677
44855
Actinomycetota
TGA
Ser
>WENV180618665
OCQB01000345
145345
Actinomycetota
TAC
Val
>WENV180619283
OCQB01002689
235199
Actinomycetota
CAC
Val
>WENV180618820
OCQB01000577
44862
Actinomycetota
CGA
Ser
>WENV180619177
OCQB01001850
313386
Actinomycetota
CGT
Thr
>WENV180619563
OCQB01005817
254857
Actinomycetota
CCG
Arg
>WENV180618431
OCQB01000114
254857
Actinomycetota
CCG
Arg
>WENV180620689
OCQB01230892
382278
Actinomycetota
GAC
Val
>WENV180618926
OCQB01000812
144700
Actinomycetota
CAT
Met
>WENV180618537
OCQB01000213
44942
Actinomycetota
TGA
Ser
>WENV180618506
OCQB01000178
243671
Actinomycetota
CTC
Glu
>WENV180618294
OCQB01000028
98279
Actinomycetota
GTA
Tyr
>WENV180618507
OCQB01000178
338148
Actinomycetota
CTG
Gln
>WENV180618289
OCQB01000028
338148
Actinomycetota
CTG
Gln
>WENV180619355
OCQB01003197
235148
Actinomycetota
GTT
Asn
>WENV180619266
OCQB01002637
235148
Actinomycetota
GTT
Asn
>WENV180618624
OCQB01000298
235148
Actinomycetota
GTT
Asn
>WENV180618604
OCQB01000283
235148
Actinomycetota
GTT
Asn
>WENV180618603
OCQB01000283
235148
Actinomycetota
GTT
Asn
>WENV180618505
OCQB01000178
53078
Actinomycetota
GGA
Ser
>WENV180619243
OCQB01002406
144825
Actinomycetota
CAT
Met
>WENV180618627
OCQB01000299
145347
Actinomycetota
CAA
Leu
>WENV180619165
OCQB01001803
235348
Actinomycetota
CCT
Arg
>WENV180619773
OCQB01011434
144907
Actinomycetota
GGG
Pro
>WENV180618296
OCQB01000028
16467
Actinomycetota
GCT
Ser
>WENV180618545
OCQB01000223
411554
Actinomycetota
CCC
Gly
>WENV180618291
OCQB01000028
113601
Actinomycetota
TAG
Leu
>WENV180619021
OCQB01001105
144595
Actinomycetota
CAA
Leu
>WENV180619027
OCQB01001150
145343
Actinomycetota
GGG
Pro
>WENV180618709
OCQB01000413
235149
Actinomycetota
CCT
Arg
>WENV180619507
OCQB01004984
240009
Actinomycetota
GGC
Ala
>WENV180618546
OCQB01000223
91808
Actinomycetota
CAG
Leu
>WENV180618853
OCQB01000651
145269
Actinomycetota
CAT
Met
>WENV180618290
OCQB01000028
235121
Actinomycetota
CGT
Thr
>WENV180618538
OCQB01000213
393408
Actinomycetota
TTC
Glu
>WENV180618628
OCQB01000299
144635
Actinomycetota
TGG
Pro
>WENV180618626
OCQB01000299
119485
Actinomycetota
TAA
Leu
>WENV180619528
OCQB01005304
80622
Actinomycetota
CAG
Leu
>WENV180618889
OCQB01000705
16222
Actinomycetota
GAG
Leu
>WENV180619569
OCQB01005917
412834
Actinomycetota
GCA
Cys
>WENV180618736
OCQB01000469
235173
Actinomycetota
GGC
Ala
>WENV180619267
OCQB01002637
243162
Actinomycetota
GTT
Asn
>WENV180619044
OCQB01001195
144660
Actinomycetota
TAC
Val
>WENV180618619
OCQB01000296
278447
Actinomycetota
GTG
His
>WENV180618925
OCQB01000812
95593
Actinomycetota
>WENV180619291
OCQB01002754
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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