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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181124676
OEFT01000540
243647
Bacillota
TTT
Lys
>WENV181124754
OEFT01001367
243647
Bacillota
TTT
Lys
>WENV181125051
OEFT01009913
243647
Bacillota
TTT
Lys
>WENV181124980
OEFT01007221
178679
Bacillota
CAT
Met
>WENV181124650
OEFT01000357
26899
Bacillota
GGA
Ser
>WENV181125381
OEFT01078467
339630
Bacillota
GCC
Gly
>WENV181124673
OEFT01000534
16842
Bacillota
CGA
Ser
>WENV181124685
OEFT01000625
16842
Bacillota
CGA
Ser
>WENV181124789
OEFT01002145
37213
Bacillota
TGA
Ser
>WENV181125013
OEFT01008488
37213
Bacillota
TGA
Ser
>WENV181125110
OEFT01013176
235693
Bacillota
GGT
Thr
>WENV181124775
OEFT01001696
246392
Bacillota
GTT
Asn
>WENV181125139
OEFT01014504
37549
Bacillota
TAA
Leu
>WENV181124620
OEFT01000243
411591
Bacillota
GGT
Thr
>WENV181125075
OEFT01011880
243119
Bacillota
CTT
Lys
>WENV181124882
OEFT01004084
152047
Bacillota
GGG
Pro
>WENV181125104
OEFT01012976
422863
Bacillota
GCA
Cys
>WENV181125254
OEFT01034197
235137
Bacillota
TGC
Ala
>WENV181124941
OEFT01006083
235137
Bacillota
TGC
Ala
>WENV181124777
OEFT01001696
241761
Bacillota
TAC
Val
>WENV181125198
OEFT01023252
16834
Bacillota
GCT
Ser
>WENV181125042
OEFT01009404
16834
Bacillota
GCT
Ser
>WENV181124783
OEFT01001967
16834
Bacillota
GCT
Ser
>WENV181125346
OEFT01059528
268272
Bacillota
TGC
Ala
>WENV181125315
OEFT01049495
268272
Bacillota
TGC
Ala
>WENV181125311
OEFT01048860
268272
Bacillota
TGC
Ala
>WENV181125197
OEFT01023214
268272
Bacillota
TGC
Ala
>WENV181125395
OEFT01088590
239076
Bacillota
GAA
Phe
>WENV181125112
OEFT01013290
243646
Bacillota
GTT
Asn
>WENV181124753
OEFT01001367
243646
Bacillota
GTT
Asn
>WENV181124675
OEFT01000540
243646
Bacillota
GTT
Asn
>WENV181124899
OEFT01004692
114002
Bacillota
CAA
Leu
>WENV181124672
OEFT01000532
114002
Bacillota
CAA
Leu
>WENV181124945
OEFT01006199
37437
Bacillota
TAA
Leu
>WENV181124570
OEFT01000092
37437
Bacillota
TAA
Leu
>WENV181124986
OEFT01007221
113951
Bacillota
GTA
Tyr
>WENV181125114
OEFT01013290
243612
Bacillota
TAC
Val
>WENV181124926
OEFT01005556
243612
Bacillota
TAC
Val
>WENV181124797
OEFT01002338
243612
Bacillota
TAC
Val
>WENV181125457
OEFT01120479
81382
Bacillota
GAG
Leu
>WENV181125454
OEFT01119654
81373
Bacillota
GTA
Tyr
>WENV181125249
OEFT01032404
147135
Bacillota
ACG
Arg
>WENV181125374
OEFT01073388
148268
Bacillota
CGG
Pro
>WENV181124984
OEFT01007221
242848
Bacillota
GAA
Phe
>WENV181125300
OEFT01045751
342895
Bacillota
CAT
Met
>WENV181125215
OEFT01028067
342895
Bacillota
CAT
Met
>WENV181124989
OEFT01007452
342895
Bacillota
CAT
Met
>WENV181125236
OEFT01030734
18852
Bacillota
GCT
Ser
>WENV181125138
OEFT01014504
419945
Bacillota
GCA
Cys
>WENV181125190
OEFT01022369
250349
Bacillota
GAA
Phe
>WENV181124958
OEFT01006476
250349
Bacillota
GAA
Phe
>WENV181124901
OEFT01004706
250349
Bacillota
GAA
Phe
>WENV181124744
OEFT01001296
250349
Bacillota
GAA
Phe
>WENV181124737
OEFT01001262
250349
Bacillota
GAA
Phe
>WENV181124577
OEFT01000108
250349
Bacillota
GAA
Phe
>WENV181124567
OEFT01000092
250349
Bacillota
GAA
Phe
>WENV181124979
OEFT01007221
148057
Bacillota
CAT
Met
>WENV181125373
OEFT01072955
152045
Bacillota
CAT
Met
>WENV181124975
OEFT01006804
235701
Bacillota
TTT
Lys
>WENV181125265
OEFT01036883
152046
Bacillota
TCT
Arg
>WENV181125237
OEFT01030849
237846
Bacillota
GCC
Gly
>WENV181125066
OEFT01011277
237846
Bacillota
GCC
Gly
>WENV181125189
OEFT01022369
235197
Bacillota
GTC
Asp
>WENV181124900
OEFT01004706
235197
Bacillota
GTC
Asp
>WENV181124743
OEFT01001296
235197
Bacillota
GTC
Asp
>WENV181124736
OEFT01001262
235197
Bacillota
GTC
Asp
>WENV181124576
OEFT01000108
235197
Bacillota
GTC
Asp
>WENV181124566
OEFT01000092
235197
Bacillota
GTC
Asp
>WENV181124929
OEFT01005703
147183
Bacillota
GTT
Asn
>WENV181125049
OEFT01009913
243613
Bacillota
GTG
His
>WENV181124973
OEFT01006804
243613
Bacillota
GTG
His
>WENV181125465
OEFT01127689
144672
Bacillota
TCT
Arg
>WENV181124565
OEFT01000089
148495
Bacillota
TCT
Arg
>WENV181125432
OEFT01105417
256920
Bacillota
TTT
Lys
>WENV181125111
OEFT01013176
152491
Bacillota
CAT
Met
>WENV181124589
OEFT01000125
178684
Bacillota
TGG
Pro
>WENV181125333
OEFT01053520
178024
Bacillota
TCT
Arg
>WENV181124972
OEFT01006751
413657
Bacillota
CCC
Gly
>WENV181125037
OEFT01009204
272488
Bacillota
GAA
Phe
>WENV181125050
OEFT01009913
343027
Bacillota
TTG
Gln
>WENV181124974
OEFT01006804
343027
Bacillota
TTG
Gln
>WENV181125090
OEFT01012905
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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