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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181158153
OEIG01181994
243647
Bacillota
TTT
Lys
>WENV181157650
OEIG01018666
116171
Bacillota
TAG
Leu
>WENV181157170
OEIG01000653
178679
Bacillota
CAT
Met
>WENV181157317
OEIG01001922
16842
Bacillota
CGA
Ser
>WENV181157996
OEIG01079511
342730
Bacillota
CTC
Glu
>WENV181157644
OEIG01018666
359540
Bacillota
GTT
Asn
>WENV181157469
OEIG01006959
148348
Bacillota
GTC
Asp
>WENV181158108
OEIG01141691
307003
Bacillota
TGC
Ala
>WENV181157860
OEIG01039375
235150
Bacillota
TGC
Ala
>WENV181157721
OEIG01024309
235137
Bacillota
TGC
Ala
>WENV181158051
OEIG01105378
308424
Bacillota
TTT
Lys
>WENV181157843
OEIG01037767
308424
Bacillota
TTT
Lys
>WENV181157774
OEIG01031710
308424
Bacillota
TTT
Lys
>WENV181157367
OEIG01002789
16834
Bacillota
GCT
Ser
>WENV181157452
OEIG01006182
114002
Bacillota
CAA
Leu
>WENV181157724
OEIG01025245
37437
Bacillota
TAA
Leu
>WENV181157404
OEIG01003692
37437
Bacillota
TAA
Leu
>WENV181157293
OEIG01001646
37437
Bacillota
TAA
Leu
>WENV181157525
OEIG01009551
296878
Bacillota
GTT
Asn
>WENV181158139
OEIG01169580
296878
Bacillota
GTT
Asn
>WENV181157778
OEIG01031710
162028
Bacillota
ACG
Arg
>WENV181157952
OEIG01062213
113951
Bacillota
GTA
Tyr
>WENV181157841
OEIG01037767
113951
Bacillota
GTA
Tyr
>WENV181157176
OEIG01000653
113951
Bacillota
GTA
Tyr
>WENV181157527
OEIG01009551
243612
Bacillota
TAC
Val
>WENV181157579
OEIG01012220
199366
Bacillota
CAT
Met
>WENV181157648
OEIG01018666
380750
Bacillota
TGT
Thr
>WENV181157470
OEIG01006959
286137
Bacillota
GAA
Phe
>WENV181157578
OEIG01012220
81373
Bacillota
GTA
Tyr
>WENV181157855
OEIG01038864
147135
Bacillota
ACG
Arg
>WENV181157825
OEIG01036392
242848
Bacillota
GAA
Phe
>WENV181157380
OEIG01003016
242848
Bacillota
GAA
Phe
>WENV181157174
OEIG01000653
242848
Bacillota
GAA
Phe
>WENV181157913
OEIG01051247
342895
Bacillota
CAT
Met
>WENV181157582
OEIG01012474
342895
Bacillota
CAT
Met
>WENV181157445
OEIG01005947
342895
Bacillota
CAT
Met
>WENV181157072
OEIG01000320
194150
Bacillota
TGG
Pro
>WENV181157961
OEIG01067258
185292
Bacillota
ACG
Arg
>WENV181158059
OEIG01109218
96694
Bacillota
TAG
Leu
>WENV181157980
OEIG01071125
235701
Bacillota
TTT
Lys
>WENV181157523
OEIG01009370
152019
Bacillota
GAT
Ile
>WENV181157649
OEIG01018666
101142
Bacillota
GTA
Tyr
>WENV181157861
OEIG01039449
237846
Bacillota
GCC
Gly
>WENV181158150
OEIG01181599
235197
Bacillota
GTC
Asp
>WENV181157400
OEIG01003692
235197
Bacillota
GTC
Asp
>WENV181158137
OEIG01169101
368876
Bacillota
GCC
Gly
>WENV181157402
OEIG01003692
368876
Bacillota
GCC
Gly
>WENV181157283
OEIG01001420
368876
Bacillota
GCC
Gly
>WENV181157557
OEIG01011171
84171
Bacillota
GAG
Leu
>WENV181157645
OEIG01018666
388132
Bacillota
TTC
Glu
>WENV181157646
OEIG01018666
235288
Bacillota
TAC
Val
>WENV181157641
OEIG01018666
163753
Bacillota
TGG
Pro
>WENV181157949
OEIG01062213
147183
Bacillota
GTT
Asn
>WENV181157838
OEIG01037767
147183
Bacillota
GTT
Asn
>WENV181157821
OEIG01036392
147183
Bacillota
GTT
Asn
>WENV181157631
OEIG01017615
147183
Bacillota
GTT
Asn
>WENV181157376
OEIG01003016
147183
Bacillota
GTT
Asn
>WENV181158040
OEIG01102875
243613
Bacillota
GTG
His
>WENV181157468
OEIG01006959
347851
Bacillota
TTC
Glu
>WENV181157489
OEIG01007966
127572
Bacillota
ACG
Arg
>WENV181157647
OEIG01018666
199895
Bacillota
GTC
Asp
>WENV181157937
OEIG01056614
144762
Bacillota
TCT
Arg
>WENV181158105
OEIG01140143
241638
Bacillota
GTG
His
>WENV181157868
OEIG01040949
281472
Bacillota
GGT
Thr
>WENV181157074
OEIG01000320
178024
Bacillota
TCT
Arg
>WENV181157699
OEIG01021745
413657
Bacillota
CCC
Gly
>WENV181157614
OEIG01015141
152018
Bacillota
CCT
Arg
>WENV181157556
OEIG01011171
81598
Bacillota
CAG
Leu
>WENV181157249
OEIG01001193
115876
Bacillota
GTA
Tyr
>WENV181157637
OEIG01018192
413179
Bacillota
CCC
Gly
>WENV181158041
OEIG01102875
343027
Bacillota
TTG
Gln
>WENV181157598
OEIG01013977
151836
Bacillota
TCT
Arg
>WENV181157314
OEIG01001891
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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