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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181158257
OEIH01000101
238673
Bacteroidota
GAA
Phe
>WENV181158638
OEIH01004548
95987
Bacteroidota
CAA
Leu
>WENV181158332
OEIH01000425
246615
Bacteroidota
TCC
Gly
>WENV181158365
OEIH01000717
246615
Bacteroidota
TCC
Gly
>WENV181158432
OEIH01001316
246615
Bacteroidota
TCC
Gly
>WENV181159361
OEIH01200936
246615
Bacteroidota
TCC
Gly
>WENV181158397
OEIH01001010
339412
Bacteroidota
GGT
Thr
>WENV181158702
OEIH01006457
146761
Bacteroidota
GAT
Ile
>WENV181158735
OEIH01008158
237796
Bacteroidota
CGT
Thr
>WENV181158255
OEIH01000096
147942
Bacteroidota
GTC
Asp
>WENV181158431
OEIH01001316
97610
Bacteroidota
GTA
Tyr
>WENV181159271
OEIH01131171
97336
Bacteroidota
CAG
Leu
>WENV181159299
OEIH01151817
126965
Bacteroidota
GGG
Pro
>WENV181158512
OEIH01002045
246808
Bacteroidota
CTT
Lys
>WENV181158433
OEIH01001316
345063
Bacteroidota
GGT
Thr
>WENV181158271
OEIH01000157
343560
Bacteroidota
TCG
Arg
>WENV181158298
OEIH01000244
344824
Bacteroidota
CCG
Arg
>WENV181158214
OEIH01000027
340029
Bacteroidota
TTC
Glu
>WENV181158213
OEIH01000027
340029
Bacteroidota
TTC
Glu
>WENV181159370
OEIH01205170
128178
Bacteroidota
TAC
Val
>WENV181158243
OEIH01000066
128178
Bacteroidota
TAC
Val
>WENV181158242
OEIH01000066
128178
Bacteroidota
TAC
Val
>WENV181158241
OEIH01000066
128178
Bacteroidota
TAC
Val
>WENV181158895
OEIH01015564
413952
Bacteroidota
>WENV181159185
OEIH01078510
80835
Bacteroidota
GTA
Tyr
>WENV181158860
OEIH01013161
80835
Bacteroidota
GTA
Tyr
>WENV181158429
OEIH01001312
246224
Bacteroidota
GGG
Pro
>WENV181158233
OEIH01000052
127221
Bacteroidota
TAC
Val
>WENV181159060
OEIH01036855
344692
Bacteroidota
GGT
Thr
>WENV181158573
OEIH01003151
17035
Bacteroidota
GGA
Ser
>WENV181158476
OEIH01001732
17035
Bacteroidota
GGA
Ser
>WENV181158549
OEIH01002746
145504
Bacteroidota
TGT
Thr
>WENV181158430
OEIH01001316
145504
Bacteroidota
TGT
Thr
>WENV181158330
OEIH01000425
145504
Bacteroidota
TGT
Thr
>WENV181158232
OEIH01000052
126641
Bacteroidota
TAC
Val
>WENV181158190
OEIH01000004
412439
Bacteroidota
CCA
Trp
>WENV181158264
OEIH01000130
238671
Bacteroidota
TTT
Lys
>WENV181158262
OEIH01000130
238671
Bacteroidota
TTT
Lys
>WENV181158345
OEIH01000505
37076
Bacteroidota
TAA
Leu
>WENV181158733
OEIH01008127
155147
Bacteroidota
GGC
Ala
>WENV181158200
OEIH01000016
147939
Bacteroidota
CAT
Met
>WENV181158339
OEIH01000465
37794
Bacteroidota
TAA
Leu
>WENV181158286
OEIH01000185
60822
Bacteroidota
GAG
Leu
>WENV181159152
OEIH01066572
414526
Bacteroidota
GCA
Cys
>WENV181158746
OEIH01008663
414526
Bacteroidota
GCA
Cys
>WENV181159220
OEIH01102450
149691
Bacteroidota
GTT
Asn
>WENV181158495
OEIH01001893
149691
Bacteroidota
GTT
Asn
>WENV181158494
OEIH01001893
149691
Bacteroidota
GTT
Asn
>WENV181158722
OEIH01007473
81773
Bacteroidota
CAG
Leu
>WENV181158670
OEIH01005256
16898
Bacteroidota
GGA
Ser
>WENV181159359
OEIH01200635
148247
Bacteroidota
TGC
Ala
>WENV181158749
OEIH01008761
148247
Bacteroidota
TGC
Ala
>WENV181158270
OEIH01000152
147944
Bacteroidota
TCT
Arg
>WENV181158483
OEIH01001788
148318
Bacteroidota
GTT
Asn
>WENV181158455
OEIH01001547
148318
Bacteroidota
GTT
Asn
>WENV181158219
OEIH01000031
236055
Bacteroidota
TCC
Gly
>WENV181158972
OEIH01024894
235802
Bacteroidota
CAT
Met
>WENV181158354
OEIH01000613
235802
Bacteroidota
CAT
Met
>WENV181158440
OEIH01001367
59182
Bacteroidota
GAG
Leu
>WENV181158744
OEIH01008536
144639
Bacteroidota
GGC
Ala
>WENV181158606
OEIH01004111
144639
Bacteroidota
GGC
Ala
>WENV181158428
OEIH01001312
128241
Bacteroidota
TAC
Val
>WENV181158593
OEIH01003436
240012
Bacteroidota
CCC
Gly
>WENV181158371
OEIH01000807
240012
Bacteroidota
CCC
Gly
>WENV181158282
OEIH01000185
95954
Bacteroidota
TAG
Leu
>WENV181158435
OEIH01001331
244299
Bacteroidota
CGG
Pro
>WENV181158723
OEIH01007473
60485
Bacteroidota
GAG
Leu
>WENV181159358
OEIH01200524
127951
Bacteroidota
TAC
Val
>WENV181158496
OEIH01001893
244296
Bacteroidota
TTT
Lys
>WENV181158566
OEIH01003076
246641
Bacteroidota
GAA
Phe
>WENV181158438
OEIH01001356
147945
Bacteroidota
CAT
Met
>WENV181158227
OEIH01000047
147945
Bacteroidota
CAT
Met
>WENV181158221
OEIH01000033
147945
Bacteroidota
CAT
Met
>WENV181159067
OEIH01038111
341465
Bacteroidota
TTC
Glu
>WENV181158731
OEIH01008034
341465
Bacteroidota
TTC
Glu
>WENV181158379
OEIH01000859
341465
Bacteroidota
TTC
Glu
>WENV181158378
OEIH01000859
341465
Bacteroidota
TTC
Glu
>WENV181158338
OEIH01000465
239856
Bacteroidota
GCC
Gly
>WENV181158187
OEIH01000004
239856
Bacteroidota
GCC
Gly
>WENV181158511
OEIH01002042
146762
Bacteroidota
TGG
Pro
>WENV181158294
OEIH01000238
59413
Bacteroidota
GCT
Ser
>WENV181158356
OEIH01000637
146764
Bacteroidota
GTC
Asp
>WENV181158353
OEIH01000611
146764
Bacteroidota
GTC
Asp
>WENV181158513
OEIH01002045
242581
Bacteroidota
TTT
Lys
>WENV181158284
OEIH01000185
242581
Bacteroidota
TTT
Lys
>WENV181158220
OEIH01000031
342729
Bacteroidota
GGT
Thr
>WENV181158269
OEIH01000152
128249
Bacteroidota
TGG
Pro
>WENV181158283
OEIH01000185
236053
Bacteroidota
TTT
Lys
>WENV181158186
OEIH01000004
96124
Bacteroidota
TAG
Leu
>WENV181159272
OEIH01131171
59498
Bacteroidota
GAG
Leu
>WENV181158486
OEIH01001817
414472
Bacteroidota
TTG
Gln
>WENV181158324
OEIH01000381
414472
Bacteroidota
TTG
Gln
>WENV181158501
OEIH01001931
154850
Bacteroidota
CAT
Met
>WENV181158189
OEIH01000004
413546
Bacteroidota
GCA
Cys
>WENV181158217
OEIH01000031
147941
Bacteroidota
TGT
Thr
>WENV181158829
OEIH01012494
235129
Bacteroidota
GCC
Gly
>WENV181158665
OEIH01005092
235129
Bacteroidota
GCC
Gly
>WENV181159066
OEIH01037969
345164
Bacteroidota
CCT
Arg
>WENV181158553
OEIH01002790
345164
Bacteroidota
CCT
Arg
>WENV181158911
OEIH01016545
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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