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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Anticodon = CAA
HIT:
23 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.162712 (3 seq.)
>SRA1014117
SRR023845.6946
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
50
133
+
Leu
CAA
[SRA]
>SRA1014421
SRR023845.131783
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
17
100
+
Leu
CAA
[SRA]
>SRA1014758
SRR023845.301002
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
50
133
+
Leu
CAA
[SRA]
Identical group No.162717 (1 seq.)
>SRA1015039
SRR023845.430223
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
180
95
-
Leu
CAA
[SRA]
Identical group No.162718 (2 seq.)
>SRA1015189
SRR023845.492626
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
105
20
-
Leu
CAA
[SRA]
>W1710582182
FPKU01000002
Alphaproteobacteria
Devosia enhydra [FPKU]
1058771
1058686
-
Leu
CAA
[ENA]
¡û
Identical group No.176344 (1 seq.)
>SRA1016385
SRR023846.473843
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
183
98
-
Leu
CAA
[SRA]
Identical group No.180136 (152 seq.)
>W1710886820
LMYG01000034
Gammaproteobacteria
Pantoea ananatis [LMYG]
313670
313754
+
Leu
CAA
[ENA]
¡û
>W1711184168
LWLR01000001
Gammaproteobacteria
Pantoea sp. OXWO6B1 [LWLR]
1193112
1193196
+
Leu
CAA
[ENA]
¡û
>W1711424786
MIEI01000046
Gammaproteobacteria
Pantoea brenneri [MIEI]
2360
2276
-
Leu
CAA
[ENA]
¡û
>W1711455334
MIZY01000007
Gammaproteobacteria
Pantoea brenneri conspicua [MIZY]
207443
207527
+
Leu
CAA
[ENA]
¡û
>W1711512712
MLFE01000002
Gammaproteobacteria
Pantoea allii [MLFE]
325498
325582
+
Leu
CAA
[ENA]
¡û
>C171063843
CP017581
Gammaproteobacteria
Pantoea stewartii subsp. stewartii DC283 [CP017581]
896628
896712
+
Leu
CAA
-
¡û
>W131211303
ATMI01000035
Gammaproteobacteria
Tatumella saanichensis NML 06-3099 [ATMI]
158187
158271
+
Leu
CAA
[ENA]
¡û
>W131211377
ATMJ01000043
Gammaproteobacteria
Tatumella ptyseos ATCC 33301 [ATMJ]
13165
13081
-
Leu
CAA
[ENA]
¡û
>W141071573
ASJH01000002
Gammaproteobacteria
Pantoea ananatis BRT175 [ASJH]
356079
355995
-
Leu
CAA
[ENA]
¡û
>W141214616
AZTE01000091
Gammaproteobacteria
Pantoea ananatis Sd-1 [AZTE]
16616
16532
-
Leu
CAA
[ENA]
¡û
>W141223430
BADG01000298
Gammaproteobacteria
Pantoea sp. B40 [BADG]
23065
23149
+
Leu
CAA
[ENA]
¡û
>W141230725
BATH01000046
Gammaproteobacteria
Pantoea ananatis DAR 76143 [BATH]
16218
16134
-
Leu
CAA
[ENA]
¡û
>WENV170700389
LIDZ01013168
[LIDZ] food metagenome; wine grapes on drying loft during traditional withering process
51762
51678
-
Leu
CAA
[ENA]
¢þ
>W141461789
JFGT01000005
Gammaproteobacteria
Pantoea sp. IMH [JFGT]
423519
423603
+
Leu
CAA
[ENA]
¡û
>W141464046
JFJX01000067
Gammaproteobacteria
Tatumella sp. UCD-D_suzukii [JFJX]
169300
169384
+
Leu
CAA
[ENA]
¡û
>W141485851
JFZU01000023
Gammaproteobacteria
Pantoea ananatis LMG 2665 [JFZU]
330480
330564
+
Leu
CAA
[ENA]
¡û
>C181026101
CP017481
Gammaproteobacteria
Pectobacterium polaris NIBIO1006 [CP017481]
1643321
1643405
+
Leu
CAA
-
¡û
>C181026192
CP017482
Gammaproteobacteria
Pectobacterium polaris NIBIO1392 [CP017482]
4261117
4261201
+
Leu
CAA
-
¡û
>C181064739
CP022427
Gammaproteobacteria
Pantoea ananatis YJ76 [CP022427]
3471034
3470950
-
Leu
CAA
-
¡û
>C181106309
CP024842
Gammaproteobacteria
Pectobacterium versatile 3-2 [CP024842]
495251
495335
+
Leu
CAA
-
¡û
>C181217591
LS483499
Gammaproteobacteria
Tatumella ptyseos NCTC11468 [LS483499]
349769
349853
+
Leu
CAA
-
¡û
>C191122649
CP034276
Gammaproteobacteria
Pectobacterium versatile 14A [CP034276]
476403
476487
+
Leu
CAA
-
¡û
>C191134110
CP035034
Gammaproteobacteria
Pantoea ananatis NN08200 [CP035034]
4170609
4170525
-
Leu
CAA
-
¡û
>W09110832
ABVY01000026
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum WPP14 [ABVY]
28637
28721
+
Leu
CAA
[ENA]
¡û
>W141700940
JMJJ01000010
Gammaproteobacteria
Pantoea ananatis LMG 2665 [JMJJ]
364856
364940
+
Leu
CAA
[ENA]
¡û
>W141701004
JMJK01000010
Gammaproteobacteria
Pantoea ananatis [JMJK]
361077
361161
+
Leu
CAA
[ENA]
¡û
>W141701066
JMJL01000010
Gammaproteobacteria
Pantoea ananatis BD442 [JMJL]
421051
421135
+
Leu
CAA
[ENA]
¡û
>W141710904
JMPR01000004
Gammaproteobacteria
Tatumella ptyseos ATCC 33301 [JMPR]
145012
144928
-
Leu
CAA
[ENA]
¡û
>W141814860
JQHJ01000001
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum [JQHJ]
560875
560959
+
Leu
CAA
[ENA]
¡û
>W141815144
JQHN01000002
Gammaproteobacteria
Pectobacterium parvum subsp. carotovorum [JQHN]
83576
83660
+
Leu
CAA
[ENA]
¡û
>W141822020
JQOF01000010
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum [JQOF]
116792
116708
-
Leu
CAA
[ENA]
¡û
>W141822099
JQOG01000005
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum [JQOG]
214832
214748
-
Leu
CAA
[ENA]
¡û
>W1910641602
LUBB01000009
Gammaproteobacteria
Pectobacterium peruviense IFB5229 [LUBB]
107420
107504
+
Leu
CAA
[ENA]
¡û
>W1910646768
LXFV01000005
Gammaproteobacteria
Pectobacterium peruviense IFB5232 [LXFV]
143941
143857
-
Leu
CAA
[ENA]
¡û
>W1910802679
MTAG01000009
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q3 [MTAG]
188160
188244
+
Leu
CAA
[ENA]
¡û
>W1910802733
MTAH01000003
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q40 [MTAH]
389784
389700
-
Leu
CAA
[ENA]
¡û
>W1910802801
MTAI01000003
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q32 [MTAI]
199927
200011
+
Leu
CAA
[ENA]
¡û
>W1910802870
MTAJ01000003
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q47 [MTAJ]
402288
402204
-
Leu
CAA
[ENA]
¡û
>W1910802919
MTAK01000003
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q106 [MTAK]
202498
202582
+
Leu
CAA
[ENA]
¡û
>W1910802984
MTAL01000001
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q115 [MTAL]
188193
188277
+
Leu
CAA
[ENA]
¡û
>W1910803054
MTAM01000002
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum S6-2 [MTAM]
193300
193384
+
Leu
CAA
[ENA]
¡û
>W1910803121
MTAN01000003
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum T4 [MTAN]
181453
181369
-
Leu
CAA
[ENA]
¡û
>W1910803181
MTAO01000001
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q142 [MTAO]
188197
188281
+
Leu
CAA
[ENA]
¡û
>W1910803246
MTAP01000001
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum Q166 [MTAP]
188193
188277
+
Leu
CAA
[ENA]
¡û
>W1910803315
MTAQ01000002
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum S6 [MTAQ]
193300
193384
+
Leu
CAA
[ENA]
¡û
>W1910803395
MTAR01000003
Gammaproteobacteria
Pectobacterium odoriferum subsp. odoriferum T5 [MTAR]
321336
321252
-
Leu
CAA
[ENA]
¡û
>W1910826014
MWOH01000006
Gammaproteobacteria
Pectobacterium versatile Ecc71 [MWOH]
172957
173041
+
Leu
CAA
[ENA]
¡û
>W1910910596
NHBE01000003
Gammaproteobacteria
Pantoea sp. AV62 [NHBE]
280193
280277
+
Leu
CAA
[ENA]
¡û
>W1910928774
NIRH01000005
Gammaproteobacteria
Pantoea sp. AMG 501 [NIRH]
322896
322980
+
Leu
CAA
[ENA]
¡û
>W1910994184
NKXT01000006
Gammaproteobacteria
Pantoea ananatis 1.38 [NKXT]
17896
17812
-
Leu
CAA
[ENA]
¡û
>W1911081339
NMZR01000007
Gammaproteobacteria
Pantoea ananatis PANS 99-3 [NMZR]
193912
193996
+
Leu
CAA
[ENA]
¡û
>W1911081367
NMZS01000002
Gammaproteobacteria
Pantoea ananatis PANS 99-23 [NMZS]
322186
322270
+
Leu
CAA
[ENA]
¡û
>W1911081475
NMZT01000007
Gammaproteobacteria
Pantoea ananatis PANS 99-36 [NMZT]
17644
17560
-
Leu
CAA
[ENA]
¡û
>W1911081550
NMZU01000005
Gammaproteobacteria
Pantoea ananatis PANS 01-2 [NMZU]
23965
23881
-
Leu
CAA
[ENA]
¡û
>W1911081592
NMZV01000002
Gammaproteobacteria
Pantoea ananatis PANS 04-2 [NMZV]
325447
325531
+
Leu
CAA
[ENA]
¡û
>W1911081663
NMZW01000002
Gammaproteobacteria
Pantoea ananatis PNA 99-7 [NMZW]
325961
326045
+
Leu
CAA
[ENA]
¡û
>W1911081764
NMZX01000005
Gammaproteobacteria
Pantoea ananatis PNA 200-3 [NMZX]
17584
17500
-
Leu
CAA
[ENA]
¡û
>W1911081808
NMZY01000002
Gammaproteobacteria
Pantoea ananatis PNA 06-1 [NMZY]
424059
424143
+
Leu
CAA
[ENA]
¡û
>W1911081877
NMZZ01000002
Gammaproteobacteria
Pantoea ananatis PNA 15-1 [NMZZ]
383380
383296
-
Leu
CAA
[ENA]
¡û
>W1911284346
NTMH01000030
Gammaproteobacteria
Pantoea allii LMG 24248 [NTMH]
242471
242555
+
Leu
CAA
[ENA]
¡û
>W1911490503
OANO01000015
Gammaproteobacteria
Pectobacterium parvum s0416 [OANO]
6933
6849
-
Leu
CAA
[ENA]
¡û
>W1911490549
OANO01000073
Gammaproteobacteria
Pectobacterium parvum s0416 [OANO]
4646
4562
-
Leu
CAA
[ENA]
¡û
>W1911490607
OANP01000017
Gammaproteobacteria
Pectobacterium parvum s0421 [OANP]
75110
75026
-
Leu
CAA
[ENA]
¡û
>W1911490613
OANP01000029
Gammaproteobacteria
Pectobacterium parvum s0421 [OANP]
83428
83512
+
Leu
CAA
[ENA]
¡û
>W1911671733
QGAH01000004
Gammaproteobacteria
Pantoea agglomerans CFBP13516 [QGAH]
260704
260788
+
Leu
CAA
[ENA]
¡û
>W1911811792
QZDF01000016
Gammaproteobacteria
Pectobacterium polaris S4.16.03.2B [QZDF]
105000
104916
-
Leu
CAA
[ENA]
¡û
>W1911811867
QZDH01000010
Gammaproteobacteria
Pectobacterium carotovorum S1.15.11.2D [QZDH]
102063
102147
+
Leu
CAA
[ENA]
¡û
>W1911811930
QZDJ01000004
Gammaproteobacteria
Pectobacterium carotovorum S1-A16 [QZDJ]
108464
108380
-
Leu
CAA
[ENA]
¡û
>W1911812009
QZDK01000057
Gammaproteobacteria
Pectobacterium versatile S4.16.03.3I [QZDK]
1805
1721
-
Leu
CAA
[ENA]
¡û
>W1911812039
QZDL01000035
Gammaproteobacteria
Pectobacterium versatile S4.16.03.3K [QZDL]
115163
115079
-
Leu
CAA
[ENA]
¡û
>W1911812058
QZDM01000015
Gammaproteobacteria
Pectobacterium versatile S4.16.03.3F [QZDM]
115129
115045
-
Leu
CAA
[ENA]
¡û
>W1810017392
BGPS01000025
Gammaproteobacteria
Pectobacterium versatile subsp. carotovorum RMIT1 [BGPS]
166575
166659
+
Leu
CAA
[ENA]
¡û
>W1810064962
PDVV01000004
Gammaproteobacteria
Pectobacterium versatile F018 [PDVV]
375964
375880
-
Leu
CAA
[ENA]
¡û
>W1810065046
PDVW01000043
Gammaproteobacteria
Pectobacterium versatile F131 [PDVW]
9107
9191
+
Leu
CAA
[ENA]
¡û
>W1810065091
PDVX01000015
Gammaproteobacteria
Pectobacterium versatile F135 [PDVX]
80906
80990
+
Leu
CAA
[ENA]
¡û
>W1810065156
PDVY01000002
Gammaproteobacteria
Pectobacterium versatile PB69 [PDVY]
802578
802494
-
Leu
CAA
[ENA]
¡û
>W1810065219
PDVZ01000002
Gammaproteobacteria
Pectobacterium versatile PB70 [PDVZ]
425673
425589
-
Leu
CAA
[ENA]
¡û
>W1810326501
PUGB01000010
Gammaproteobacteria
Pantoea ananatis ARC311 [PUGB]
24175
24091
-
Leu
CAA
[ENA]
¡û
>W1810326567
PUGC01000026
Gammaproteobacteria
Pantoea ananatis ARC310 [PUGC]
34782
34698
-
Leu
CAA
[ENA]
¡û
>W1810326643
PUGD01000003
Gammaproteobacteria
Pantoea ananatis ARC272 [PUGD]
127541
127625
+
Leu
CAA
[ENA]
¡û
>W1810424559
PYUO01000007
Gammaproteobacteria
Pectobacterium peruviense A97-S13-F16 [PYUO]
299627
299543
-
Leu
CAA
[ENA]
¡û
>W1810424598
PYUP01000010
Gammaproteobacteria
Pectobacterium peruviense A350-S18-N16 [PYUP]
309405
309321
-
Leu
CAA
[ENA]
¡û
>W1810573378
QEKR01000001
Gammaproteobacteria
Pectobacterium versatile WS2152 [QEKR]
1551009
1550925
-
Leu
CAA
[ENA]
¡û
>W1810573430
QEKS01000004
Gammaproteobacteria
Pantoea ananatis PNA 14-1 [QEKS]
361910
361826
-
Leu
CAA
[ENA]
¡û
>W1810579952
QESV01000005
Gammaproteobacteria
Pectobacterium versatile SS96 [QESV]
122087
122171
+
Leu
CAA
[ENA]
¡û
>W1810580066
QESX01000001
Gammaproteobacteria
Pectobacterium polaris SS28 [QESX]
198824
198908
+
Leu
CAA
[ENA]
¡û
>W1810596456
QGGN01000003
Gammaproteobacteria
Pantoea ananatis PNA 200-7 [QGGN]
1403
1319
-
Leu
CAA
[ENA]
¡û
>W1810597359
QGHF01000002
Gammaproteobacteria
Pantoea allii PNA 200-10 [QGHF]
283487
283403
-
Leu
CAA
[ENA]
¡û
>W1810608563
QGTK01000005
Gammaproteobacteria
Pantoea ananatis PNA 11-1 [QGTK]
327564
327648
+
Leu
CAA
[ENA]
¡û
>W1810608784
QGTO01000004
Gammaproteobacteria
Pantoea ananatis PNA 98-11 [QGTO]
382876
382792
-
Leu
CAA
[ENA]
¡û
>W1810609148
QGTU01000002
Gammaproteobacteria
Pantoea sp. AG702 [QGTU]
320871
320955
+
Leu
CAA
[ENA]
¡û
>W1810625530
QHJU01000071
Gammaproteobacteria
Pectobacterium aquaticum A104-S21-F16 [QHJU]
10051
9967
-
Leu
CAA
[ENA]
¡û
>W1810628534
QICO01000002
Gammaproteobacteria
Pantoea sp. PNA 03-3 [QICO]
332619
332535
-
Leu
CAA
[ENA]
¡û
>W1810628842
QICU01000002
Gammaproteobacteria
Pantoea ananatis PNA 07-1 [QICU]
374149
374065
-
Leu
CAA
[ENA]
¡û
>W1810696045
QLSY01000003
Gammaproteobacteria
Pantoea ananatis PNA 86-1 [QLSY]
360737
360653
-
Leu
CAA
[ENA]
¡û
>W1810786927
QRDI01000004
Gammaproteobacteria
Pantoea ananatis PANS 02-01 [QRDI]
352918
352834
-
Leu
CAA
[ENA]
¡û
>W1810861019
QTTO01000004
Gammaproteobacteria
Pantoea ananatis PNA 07-10 [QTTO]
322763
322847
+
Leu
CAA
[ENA]
¡û
>W1810861385
QTTV01000003
Gammaproteobacteria
Pantoea ananatis PANS 200-1 [QTTV]
322636
322720
+
Leu
CAA
[ENA]
¡û
>SRA1015598
SRR023846.127961
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
165
249
+
Leu
CAA
[SRA]
>C151056812
CP009678
Gammaproteobacteria
Pectobacterium odoriferum BC S7 [CP009678]
448331
448415
+
Leu
CAA
[Ensembl]
¡û
>C10110059
CP001875
Gammaproteobacteria
Pantoea ananatis LMG 20103 [CP001875]
602913
602997
+
Leu
CAA
[Ensembl]
¡û
>W1510644109
CVNF01000007
Gammaproteobacteria
Pantoea ananatis S6 [CVNF]
17164
17248
+
Leu
CAA
[ENA]
¡û
>W1510644176
CVNG01000004
Gammaproteobacteria
Pantoea ananatis S7 [CVNG]
6089
6173
+
Leu
CAA
[ENA]
¡û
>W1510644243
CVNH01000004
Gammaproteobacteria
Pantoea ananatis S8 [CVNH]
324847
324931
+
Leu
CAA
[ENA]
¡û
>C11116638
AP012032
Gammaproteobacteria
Pantoea ananatis AJ13355 [AP012032]
4388116
4388200
+
Leu
CAA
[Ensembl]
¡û
>W1511304317
JPKO01000011
Gammaproteobacteria
Pantoea stewartii subsp. indologenes LMG 2632 [JPKO]
6534
6450
-
Leu
CAA
[ENA]
¡û
>W1511336172
JQZZ01000163
Gammaproteobacteria
Pantoea ananatis PaMB1 [JQZZ]
6585
6501
-
Leu
CAA
[ENA]
¡û
>W1511357418
JRWI01000007
Gammaproteobacteria
Pantoea stewartii M009 [JRWI]
120209
120293
+
Leu
CAA
[ENA]
¡û
>W1511390044
JSXF01000009
Gammaproteobacteria
Pantoea stewartii M073a [JSXF]
318344
318260
-
Leu
CAA
[ENA]
¡û
>W1511435806
JUJI01000010
Gammaproteobacteria
Pectobacterium parvum subsp. carotovorum YC T1 [JUJI]
92458
92374
-
Leu
CAA
[ENA]
¡û
>W1511436193
JUJO01000013
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum YC D16 [JUJO]
30032
30116
+
Leu
CAA
[ENA]
¡û
>W1511436317
JUJQ01000004
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum YC T39 [JUJQ]
182742
182826
+
Leu
CAA
[ENA]
¡û
>W1511436444
JUJS01000002
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum BC T5 [JUJS]
188216
188300
+
Leu
CAA
[ENA]
¡û
>W1511590198
LBFU01000102
Gammaproteobacteria
Pantoea ananatis MR5 [LBFU]
16074
16158
+
Leu
CAA
[ENA]
¡û
>W1511683946
LFLX01000002
Gammaproteobacteria
Pantoea ananatis CFH 7-1 [LFLX]
806455
806539
+
Leu
CAA
[ENA]
¡û
>W11187491
CAEI01000157
Gammaproteobacteria
Pantoea ananatis [CAEI]
146825
146909
+
Leu
CAA
[ENA]
¡û
>W11187527
CAEJ01000038
Gammaproteobacteria
Pantoea ananatis [CAEJ]
146047
146131
+
Leu
CAA
[ENA]
¡û
>C121005465
CP003085
Gammaproteobacteria
Pantoea ananatis PA13 [CP003085]
3977499
3977415
-
Leu
CAA
[Ensembl]
¡û
>C121018311
HE617160
Gammaproteobacteria
Pantoea ananatis LMG 5342 [HE617160]
3991375
3991291
-
Leu
CAA
[Ensembl]
¡û
>C161068306
CP014207
Gammaproteobacteria
Pantoea ananatis R100 [CP014207]
1479938
1480022
+
Leu
CAA
-
¡û
>C161107967
LN907827
Gammaproteobacteria
Duffyella gerundensis [LN907827]
656417
656501
+
Leu
CAA
[Ensembl]
¡û
>W121032818
AHIE01000037
Gammaproteobacteria
Pantoea stewartii subsp. stewartii DC283 [AHIE]
316110
316194
+
Leu
CAA
[ENA]
¡û
>W1610011562
AODT01000007
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum ICMP 5702 [AODT]
176234
176318
+
Leu
CAA
[ENA]
¡û
>W1610011634
AODU01000004
Gammaproteobacteria
Pectobacterium peruviense subsp. carotovorum UGC32 [AODU]
181193
181277
+
Leu
CAA
[ENA]
¡û
>W1610085356
CSTC01000086
Gammaproteobacteria
Pectobacterium carotovorum Polaris 6 [CSTC]
10253
10337
+
Leu
CAA
[ENA]
¡û
>W1610589751
LDQX01000015
Gammaproteobacteria
Pantoea ananatis [LDQX]
35114
35198
+
Leu
CAA
[ENA]
¡û
>W1610589792
LDQY01000005
Gammaproteobacteria
Pantoea ananatis [LDQY]
147640
147724
+
Leu
CAA
[ENA]
¡û
>W1610589873
LDQZ01000028
Gammaproteobacteria
Pantoea ananatis [LDQZ]
48395
48311
-
Leu
CAA
[ENA]
¡û
>W1610589960
LDRA01000021
Gammaproteobacteria
Pantoea ananatis [LDRA]
53703
53787
+
Leu
CAA
[ENA]
¡û
>W1610591704
LDSH01000020
Gammaproteobacteria
Pantoea stewartii [LDSH]
7252
7168
-
Leu
CAA
[ENA]
¡û
>W1610591772
LDSI01000025
Gammaproteobacteria
Pantoea stewartii [LDSI]
103411
103495
+
Leu
CAA
[ENA]
¡û
>W1610591844
LDSJ01000025
Gammaproteobacteria
Pantoea stewartii [LDSJ]
380823
380907
+
Leu
CAA
[ENA]
¡û
>W1610591879
LDSK01000004
Gammaproteobacteria
Pantoea stewartii [LDSK]
381258
381342
+
Leu
CAA
[ENA]
¡û
>W1610629047
LIHC01000013
Gammaproteobacteria
Pantoea stewartii [LIHC]
324523
324439
-
Leu
CAA
[ENA]
¡û
>W1610630838
LIIU01000018
Gammaproteobacteria
Pantoea stewartii [LIIU]
303684
303600
-
Leu
CAA
[ENA]
¡û
>W1610748082
LMYG01000034
Gammaproteobacteria
Pantoea ananatis [LMYG]
313670
313754
+
Leu
CAA
[ENA]
¡û
>W1610990050
LWLR01000001
Gammaproteobacteria
Pantoea sp. OXWO6B1 [LWLR]
1193112
1193196
+
Leu
CAA
[ENA]
¡û
>W1710011356
AODT01000007
Gammaproteobacteria
Pectobacterium carotovorum subsp. carotovorum ICMP 5702 [AODT]
176234
176318
+
Leu
CAA
[ENA]
¡û
>W1710011428
AODU01000004
Gammaproteobacteria
Pectobacterium peruviense subsp. carotovorum UGC32 [AODU]
181193
181277
+
Leu
CAA
[ENA]
¡û
>W1710580667
FPJM01000003
Gammaproteobacteria
Pantoea ananatis [FPJM]
325507
325591
+
Leu
CAA
[ENA]
¡û
>W1710585370
FQWI01000002
Gammaproteobacteria
Pectobacterium carotovorum [FQWI]
176104
176188
+
Leu
CAA
[ENA]
¡û
>W1710602092
FUXY01000002
Gammaproteobacteria
Pantoea ananatis [FUXY]
346877
346793
-
Leu
CAA
[ENA]
¡û
>W1710709031
LDQX01000015
Gammaproteobacteria
Pantoea ananatis [LDQX]
35114
35198
+
Leu
CAA
[ENA]
¡û
>W1710709072
LDQY01000005
Gammaproteobacteria
Pantoea ananatis [LDQY]
147640
147724
+
Leu
CAA
[ENA]
¡û
>W1710709153
LDQZ01000028
Gammaproteobacteria
Pantoea ananatis [LDQZ]
48395
48311
-
Leu
CAA
[ENA]
¡û
>W1710709240
LDRA01000021
Gammaproteobacteria
Pantoea ananatis [LDRA]
53703
53787
+
Leu
CAA
[ENA]
¡û
>W1710710984
LDSH01000020
Gammaproteobacteria
Pantoea stewartii [LDSH]
7252
7168
-
Leu
CAA
[ENA]
¡û
>W1710711052
LDSI01000025
Gammaproteobacteria
Pantoea stewartii [LDSI]
103411
103495
+
Leu
CAA
[ENA]
¡û
>W1710711124
LDSJ01000025
Gammaproteobacteria
Pantoea stewartii [LDSJ]
380823
380907
+
Leu
CAA
[ENA]
¡û
>W1710711159
LDSK01000004
Gammaproteobacteria
Pantoea stewartii [LDSK]
381258
381342
+
Leu
CAA
[ENA]
¡û
>W1710760180
LIHC01000013
Gammaproteobacteria
Pantoea stewartii [LIHC]
324523
324439
-
Leu
CAA
[ENA]
¡û
>W1710762177
LIIU01000018
Gammaproteobacteria
Pantoea stewartii [LIIU]
303684
303600
-
Leu
CAA
[ENA]
¡û
Identical group No.180327 (17 seq.)
>SRA1014642
SRR023845.237786
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
190
106
-
Leu
CAA
[SRA]
>SRA1016372
SRR023846.469833
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
185
269
+
Leu
CAA
[SRA]
>C161003864
CP006367
Alphaproteobacteria
Aureimonas sp. AU20 [CP006367]
3598785
3598869
+
Leu
CAA
[Ensembl]
¡û
>W1610056456
BBWH01000010
Alphaproteobacteria
Aureimonas sp. AU12 [BBWH]
4305
4389
+
Leu
CAA
[ENA]
¡û
>W1610056533
BBWI01000030
Alphaproteobacteria
Aureimonas sp. AU20 [BBWI]
10134
10050
-
Leu
CAA
[ENA]
¡û
>W1610056651
BBWL01000017
Alphaproteobacteria
Aureimonas sp. AU40 [BBWL]
10146
10062
-
Leu
CAA
[ENA]
¡û
>W1610056703
BBWM01000010
Alphaproteobacteria
Aureimonas sp. D3 [BBWM]
93249
93333
+
Leu
CAA
[ENA]
¡û
>W1610056934
BBWR01000002
Alphaproteobacteria
Aureimonas frigidaquae [BBWR]
153298
153382
+
Leu
CAA
[ENA]
¡û
>W1610057003
BBWS01000032
Alphaproteobacteria
Aureimonas sp. N4 [BBWS]
41018
41102
+
Leu
CAA
[ENA]
¡û
>W1610588123
LDPZ01000020
Alphaproteobacteria
Aureimonas ureilytica [LDPZ]
4480
4396
-
Leu
CAA
[ENA]
¡û
>W1710053155
BBWH01000010
Alphaproteobacteria
Aureimonas sp. AU12 [BBWH]
4305
4389
+
Leu
CAA
[ENA]
¡û
>W1710053232
BBWI01000030
Alphaproteobacteria
Aureimonas sp. AU20 [BBWI]
10134
10050
-
Leu
CAA
[ENA]
¡û
>W1710053350
BBWL01000017
Alphaproteobacteria
Aureimonas sp. AU40 [BBWL]
10146
10062
-
Leu
CAA
[ENA]
¡û
>W1710053402
BBWM01000010
Alphaproteobacteria
Aureimonas sp. D3 [BBWM]
93249
93333
+
Leu
CAA
[ENA]
¡û
>W1710053633
BBWR01000002
Alphaproteobacteria
Aureimonas frigidaquae [BBWR]
153298
153382
+
Leu
CAA
[ENA]
¡û
>W1710053702
BBWS01000032
Alphaproteobacteria
Aureimonas sp. N4 [BBWS]
41018
41102
+
Leu
CAA
[ENA]
¡û
>W1710707403
LDPZ01000020
Alphaproteobacteria
Aureimonas ureilytica [LDPZ]
4480
4396
-
Leu
CAA
[ENA]
¡û
Identical group No.180424 (13 seq.)
>W1710870481
LMKN01000009
Alphaproteobacteria
Sphingomonas sp. Leaf20 [LMKN]
145715
145799
+
Leu
CAA
[ENA]
¡û
>W1710870755
LMKT01000024
Alphaproteobacteria
Sphingomonas sp. Leaf226 [LMKT]
206913
206997
+
Leu
CAA
[ENA]
¡û
>W1710871043
LMKZ01000002
Alphaproteobacteria
Sphingomonas sp. Leaf30 [LMKZ]
387863
387779
-
Leu
CAA
[ENA]
¡û
>W141801039
JPDP01000555
Alphaproteobacteria
Sphingomonas sp. STIS6.2 [JPDP]
6385
6469
+
Leu
CAA
[ENA]
¡û
>W141805159
JPJC01000024
Alphaproteobacteria
Sphingomonas sp. FUKUSWIS1 [JPJC]
4305
4221
-
Leu
CAA
[ENA]
¡û
>W1810463431
PZZN01000003
Alphaproteobacteria
Sphingomonas aerolata NW12 [PZZN]
209218
209302
+
Leu
CAA
[ENA]
¡û
>SRA1014754
SRR023845.300572
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
222
138
-
Leu
CAA
[SRA]
>SRA1015650
SRR023846.146038
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
125
41
-
Leu
CAA
[SRA]
>SRA1016014
SRR023846.312408
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
39
123
+
Leu
CAA
[SRA]
>W1511357041
JRVI01000010
Alphaproteobacteria
Sphingomonas sp. Ant20 [JRVI]
5562
5478
-
Leu
CAA
[ENA]
¡û
>W1610732827
LMKN01000009
Alphaproteobacteria
Sphingomonas sp. Leaf20 [LMKN]
145715
145799
+
Leu
CAA
[ENA]
¡û
>W1610733101
LMKT01000024
Alphaproteobacteria
Sphingomonas sp. Leaf226 [LMKT]
206913
206997
+
Leu
CAA
[ENA]
¡û
>W1610733389
LMKZ01000002
Alphaproteobacteria
Sphingomonas sp. Leaf30 [LMKZ]
387863
387779
-
Leu
CAA
[ENA]
¡û
Identical group No.180428 (14 seq.)
>W1710872887
LMMI01000034
Alphaproteobacteria
Methylobacterium sp. Leaf87 [LMMI]
183360
183276
-
Leu
CAA
[ENA]
¡û
>W1710873449
LMMU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf99 [LMMU]
436014
435930
-
Leu
CAA
[ENA]
¡û
>W1710873529
LMMW01000001
Alphaproteobacteria
Methylobacterium sp. Leaf100 [LMMW]
184401
184317
-
Leu
CAA
[ENA]
¡û
>W1710873583
LMMX01000001
Alphaproteobacteria
Methylobacterium sp. Leaf102 [LMMX]
185817
185733
-
Leu
CAA
[ENA]
¡û
>W1710874023
LMNG01000023
Alphaproteobacteria
Methylobacterium sp. Leaf112 [LMNG]
184919
184835
-
Leu
CAA
[ENA]
¡û
>W1710878698
LMRE01000001
Alphaproteobacteria
Methylobacterium sp. Leaf469 [LMRE]
190011
189927
-
Leu
CAA
[ENA]
¡û
>SRA1014719
SRR023845.281358
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
18
102
+
Leu
CAA
[SRA]
>SRA1015682
SRR023846.157732
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
185
101
-
Leu
CAA
[SRA]
>W1610735233
LMMI01000034
Alphaproteobacteria
Methylobacterium sp. Leaf87 [LMMI]
183360
183276
-
Leu
CAA
[ENA]
¡û
>W1610735795
LMMU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf99 [LMMU]
436014
435930
-
Leu
CAA
[ENA]
¡û
>W1610735875
LMMW01000001
Alphaproteobacteria
Methylobacterium sp. Leaf100 [LMMW]
184401
184317
-
Leu
CAA
[ENA]
¡û
>W1610735929
LMMX01000001
Alphaproteobacteria
Methylobacterium sp. Leaf102 [LMMX]
185817
185733
-
Leu
CAA
[ENA]
¡û
>W1610736369
LMNG01000023
Alphaproteobacteria
Methylobacterium sp. Leaf112 [LMNG]
184919
184835
-
Leu
CAA
[ENA]
¡û
>W1610741044
LMRE01000001
Alphaproteobacteria
Methylobacterium sp. Leaf469 [LMRE]
190011
189927
-
Leu
CAA
[ENA]
¡û
Identical group No.180432 (67 seq.)
>W1710808916
LKDZ01000013
Betaproteobacteria
Variovorax boronicumulans [LKDZ]
186379
186463
+
Leu
CAA
[ENA]
¡û
>W1710860145
LMCQ01000020
Betaproteobacteria
Variovorax sp. Root318D1 [LMCQ]
190839
190755
-
Leu
CAA
[ENA]
¡û
>W1710862463
LMEK01000001
Betaproteobacteria
Variovorax sp. Root434 [LMEK]
234017
233933
-
Leu
CAA
[ENA]
¡û
>W1710873404
LMMT01000009
Betaproteobacteria
Pseudorhodoferax sp. Leaf265 [LMMT]
140653
140737
+
Leu
CAA
[ENA]
¡û
>W1710873509
LMMV01000012
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
44800
44716
-
Leu
CAA
[ENA]
¡û
>W1710873761
LMNA01000029
Betaproteobacteria
Pseudorhodoferax sp. Leaf274 [LMNA]
41690
41606
-
Leu
CAA
[ENA]
¡û
>W1711123829
LUJJ01000020
Betaproteobacteria
Variovorax boronicumulans [LUJJ]
44340
44256
-
Leu
CAA
[ENA]
¡û
>W1711143340
LVHG01000002
Betaproteobacteria
Variovorax paradoxus [LVHG]
77987
77903
-
Leu
CAA
[ENA]
¡û
>W1711386492
MEFM01000014
Betaproteobacteria
Variovorax sp. SCN 67-85 [MEFM]
86554
86638
+
Leu
CAA
[ENA]
¡û
>W1711387470
MEGR01000008
Betaproteobacteria
Variovorax sp. SCN 67-20 [MEGR]
86554
86638
+
Leu
CAA
[ENA]
¡û
>W1711506637
MKWO01000046
Betaproteobacteria
Variovorax sp. 67-131 [MKWO]
86546
86630
+
Leu
CAA
[ENA]
¡û
>C171091659
CP019236
Betaproteobacteria
Rhodoferax koreense DCY-110 [CP019236]
1607051
1606967
-
Leu
CAA
-
¡û
>W131174643
ARIP01000069
Betaproteobacteria
Variovorax paradoxus 4MFCol3.1 [ARIP]
26073
25989
-
Leu
CAA
[ENA]
¡û
>W141170128
AXXD01000003
Betaproteobacteria
Variovorax sp. JGI 0001020-D06 [AXXD]
13652
13736
+
Leu
CAA
[ENA]
¡û
>W141170159
AXXG01000044
Betaproteobacteria
Variovorax sp. JGI 0001016-M12 [AXXG]
982
1066
+
Leu
CAA
[ENA]
¡û
>WENV183731213
PJTS01019937
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
387
303
-
Leu
CAA
[ENA]
¢þ
>WENV183735271
PJUA01006843
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
552
636
+
Leu
CAA
[ENA]
¢þ
>WENV183735588
PJUB01000103
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
17775
17859
+
Leu
CAA
[ENA]
¢þ
>WENV183741434
PJUG01000011
[PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment
354161
354245
+
Leu
CAA
[ENA]
¢þ
>WENV183741991
PJUH01000031
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
120402
120486
+
Leu
CAA
[ENA]
¢þ
>WENV170559285
CXWL01117730
[CXWL] groundwater metagenome; biofilm material
5886
5970
+
Leu
CAA
[ENA]
¢þ
>WENV171003298
NNBT01003696
[NNBT] plant metagenome; symbiotic tissue sample KVJ10
3080
3164
+
Leu
CAA
[ENA]
¢þ
>WENV171003634
NNBU01001176
[NNBU] plant metagenome; symbiotic tissue sample KVJ2
6645
6729
+
Leu
CAA
[ENA]
¢þ
>WENV171003701
NNBV01000411
[NNBV] plant metagenome; symbiotic tissue sample KVS11
79634
79550
-
Leu
CAA
[ENA]
¢þ
>C181078474
CP023284
Betaproteobacteria
Variovorax boronicumulans J1 [CP023284]
5723414
5723498
+
Leu
CAA
-
¡û
>C181159377
CP027773
Betaproteobacteria
Variovorax sp. PMC12 [CP027773, CP027774]
2605167
2605251
+
Leu
CAA
-
¡û
>W09119936
ACEE01000027
Betaproteobacteria
Variovorax paradoxus S110 [ACEE]
5895
5811
-
Leu
CAA
[ENA]
¡û
>C141002580
CP003911
Betaproteobacteria
Variovorax paradoxus B4 [CP003911, CP003912]
1489990
1489906
-
Leu
CAA
[Ensembl]
¡û
>C09111129
CP001635
Betaproteobacteria
Variovorax paradoxus [CP001635]
1411866
1411782
-
Leu
CAA
[Ensembl]
¡û
>W1910792829
MRCN01000009
Betaproteobacteria
Variovorax boronicumulans ACN3 [MRCN]
5909
5993
+
Leu
CAA
[ENA]
¡û
>W1911496700
OCMW01000001
Betaproteobacteria
Variovorax sp. YR752 [OCMW]
5768253
5768337
+
Leu
CAA
[ENA]
¡û
>W1911647326
QAJK01000018
Betaproteobacteria
Variovorax sp. KBW07 [QAJK]
67010
67094
+
Leu
CAA
[ENA]
¡û
>W1810072237
PEFF01000001
Betaproteobacteria
Variovorax sp. 54 [PEFF]
4642162
4642078
-
Leu
CAA
[ENA]
¡û
>W1810072640
PEFL01000001
Betaproteobacteria
Comamonas sp. 26 [PEFL]
937229
937145
-
Leu
CAA
[ENA]
¡û
>W1810192738
PKMT01000007
Betaproteobacteria
Variovorax sp. RO1 [PKMT]
98422
98338
-
Leu
CAA
[ENA]
¡û
>W1810486675
QAYA01000008
Betaproteobacteria
Variovorax sp. GV040 [QAYA]
316602
316686
+
Leu
CAA
[ENA]
¡û
>W1810577508
QEOH01000002
Betaproteobacteria
Variovorax sp. GV014 [QEOH]
591058
591142
+
Leu
CAA
[ENA]
¡û
>W1810672524
QJTM01000002
Betaproteobacteria
Variovorax sp. GV035 [QJTM]
316602
316686
+
Leu
CAA
[ENA]
¡û
>W1810676112
QKLT01000008
Betaproteobacteria
Variovorax sp. GV042 [QKLT]
316602
316686
+
Leu
CAA
[ENA]
¡û
>W1810682461
QKUE01000002
Betaproteobacteria
Variovorax sp. GV004 [QKUE]
316602
316686
+
Leu
CAA
[ENA]
¡û
>W1810759410
QPJK01000001
Betaproteobacteria
Pseudorhodoferax soli DSM 21634 [QPJK]
166431
166515
+
Leu
CAA
[ENA]
¡û
>SRA1016088
SRR023846.342990
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
39
123
+
Leu
CAA
[SRA]
>C11123618
CP002417
Betaproteobacteria
Variovorax paradoxus EPS [CP002417]
1555113
1555029
-
Leu
CAA
[Ensembl]
¡û
>W1511508921
JXQQ01000018
Betaproteobacteria
Variovorax paradoxus MEDvA23 [JXQQ]
8949
8865
-
Leu
CAA
[ENA]
¡û
>W1511554991
JZWI01000009
Betaproteobacteria
Variovorax paradoxus TBEA6 [JZWI]
117501
117417
-
Leu
CAA
[ENA]
¡û
>C161073183
CP014517
Betaproteobacteria
Variovorax sp. PAMC 28711 [CP014517]
3022464
3022380
-
Leu
CAA
[Ensembl]
¡û
>W121084953
AKIW01000020
Betaproteobacteria
Variovorax sp. CF313 [AKIW]
38872
38788
-
Leu
CAA
[ENA]
¡û
>W1610072172
BCUS01000094
Betaproteobacteria
Variovorax boronicumulans NBRC 103145 [BCUS]
23314
23398
+
Leu
CAA
[ENA]
¡û
>W1610072185
BCUT01000001
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
1343035
1343119
+
Leu
CAA
[ENA]
¡û
>W1610722491
LMCQ01000020
Betaproteobacteria
Variovorax sp. Root318D1 [LMCQ]
190839
190755
-
Leu
CAA
[ENA]
¡û
>W1610724809
LMEK01000001
Betaproteobacteria
Variovorax sp. Root434 [LMEK]
234017
233933
-
Leu
CAA
[ENA]
¡û
>W1610735750
LMMT01000009
Betaproteobacteria
Pseudorhodoferax sp. Leaf265 [LMMT]
140653
140737
+
Leu
CAA
[ENA]
¡û
>W1610735855
LMMV01000012
Betaproteobacteria
Pseudorhodoferax sp. Leaf267 [LMMV]
44800
44716
-
Leu
CAA
[ENA]
¡û
>W1610736107
LMNA01000029
Betaproteobacteria
Pseudorhodoferax sp. Leaf274 [LMNA]
41690
41606
-
Leu
CAA
[ENA]
¡û
>W1610954348
LVHG01000002
Betaproteobacteria
Variovorax paradoxus [LVHG]
77987
77903
-
Leu
CAA
[ENA]
¡û
>W1710069374
BCUS01000094
Betaproteobacteria
Variovorax boronicumulans NBRC 103145 [BCUS]
23314
23398
+
Leu
CAA
[ENA]
¡û
>W1710069387
BCUT01000001
Betaproteobacteria
Variovorax paradoxus NBRC 15149 [BCUT]
1343035
1343119
+
Leu
CAA
[ENA]
¡û
>W1710506209
FMUJ01000006
Betaproteobacteria
Variovorax sp. EL159 [FMUJ]
145874
145958
+
Leu
CAA
[ENA]
¡û
>W1710512950
FMZU01000015
Betaproteobacteria
Variovorax sp. CF079 [FMZU]
11442
11526
+
Leu
CAA
[ENA]
¡û
>W1710517955
FNDR01000006
Betaproteobacteria
Variovorax sp. OV700 [FNDR]
399439
399523
+
Leu
CAA
[ENA]
¡û
>W1710530013
FNOL01000001
Betaproteobacteria
Variovorax sp. YR634 [FNOL]
412534
412450
-
Leu
CAA
[ENA]
¡û
>W1710531347
FNPM01000001
Betaproteobacteria
Variovorax sp. YR266 [FNPM]
422582
422666
+
Leu
CAA
[ENA]
¡û
>W1710542694
FNZJ01000001
Betaproteobacteria
Variovorax sp. OK202 [FNZJ]
806783
806699
-
Leu
CAA
[ENA]
¡û
>W1710554292
FOII01000002
Betaproteobacteria
Variovorax sp. OV084 [FOII]
433395
433479
+
Leu
CAA
[ENA]
¡û
>W1710558133
FOLP01000001
Betaproteobacteria
Variovorax sp. OK212 [FOLP]
806783
806699
-
Leu
CAA
[ENA]
¡û
>W1710572118
FOWL01000002
Betaproteobacteria
Variovorax sp. OK605 [FOWL]
176916
176832
-
Leu
CAA
[ENA]
¡û
>W1710573304
FOXJ01000005
Betaproteobacteria
Variovorax sp. 770b2 [FOXJ]
364485
364401
-
Leu
CAA
[ENA]
¡û
Identical group No.180872 (6 seq.)
>W1710870820
LMKV01000001
Alphaproteobacteria
Sphingobium sp. Leaf26 [LMKV]
413325
413241
-
Leu
CAA
[ENA]
¡û
>C191002726
AP018518
Alphaproteobacteria
Sphingobium sp. YG1 [AP018518, AP018519]
423600
423684
+
Leu
CAA
-
¡û
>SRA1015701
SRR023846.162981
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
130
46
-
Leu
CAA
[SRA]
>W1610733166
LMKV01000001
Alphaproteobacteria
Sphingobium sp. Leaf26 [LMKV]
413325
413241
-
Leu
CAA
[ENA]
¡û
>W1710542216
FNYZ01000003
Alphaproteobacteria
Sphingobium sp. AP50 [FNYZ]
88854
88938
+
Leu
CAA
[ENA]
¡û
>W1710551589
FOGE01000025
Alphaproteobacteria
Sphingobium sp. YR768 [FOGE]
50945
50861
-
Leu
CAA
[ENA]
¡û
Identical group No.182280 (24 seq.)
>W1710873012
LMML01000028
Alphaproteobacteria
Methylobacterium sp. Leaf89 [LMML]
906450
906534
+
Leu
CAA
[ENA]
¡û
>W1710873669
LMMZ01000001
Alphaproteobacteria
Methylobacterium sp. Leaf104 [LMMZ]
391948
392032
+
Leu
CAA
[ENA]
¡û
>W1710873886
LMND01000012
Alphaproteobacteria
Methylobacterium sp. Leaf108 [LMND]
22797
22713
-
Leu
CAA
[ENA]
¡û
>W1710873915
LMNE01000005
Alphaproteobacteria
Methylobacterium sp. Leaf111 [LMNE]
7046
6962
-
Leu
CAA
[ENA]
¡û
>W1710874636
LMNU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf125 [LMNU]
1090400
1090484
+
Leu
CAA
[ENA]
¡û
>W1710877808
LMQK01000031
Alphaproteobacteria
Methylobacterium sp. Leaf399 [LMQK]
242838
242922
+
Leu
CAA
[ENA]
¡û
>W1710878630
LMRC01000031
Alphaproteobacteria
Methylobacterium sp. Leaf466 [LMRC]
288490
288406
-
Leu
CAA
[ENA]
¡û
>WENV170577945
FSSH01003488
[FSSH] freshwater metagenome; drinking water
686
770
+
Leu
CAA
[ENA]
¢þ
>W141819196
JQMC01000023
Alphaproteobacteria
Rhizorhabdus wittichii [JQMC]
77730
77814
+
Leu
CAA
[ENA]
¡û
>W1810057184
PDHT01000001
Alphaproteobacteria
Methylobacterium sp. V23 [PDHT]
659104
659188
+
Leu
CAA
[ENA]
¡û
>W1810487222
QAYK01000014
Alphaproteobacteria
Methylobacterium sp. GV104 [QAYK]
146258
146342
+
Leu
CAA
[ENA]
¡û
>W1810672718
QJTP01000014
Alphaproteobacteria
Methylobacterium sp. GV094 [QJTP]
146258
146342
+
Leu
CAA
[ENA]
¡û
>W1810684750
QKYU01000001
Alphaproteobacteria
Humitalea rosea DSM 24525 [QKYU]
408369
408453
+
Leu
CAA
[ENA]
¡û
>SRA1014694
SRR023845.267044
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
93
9
-
Leu
CAA
[SRA]
>W121031762
AHHA01000023
Alphaproteobacteria
Sphingomonas sp. PAMC 26617 [AHHA]
56114
56198
+
Leu
CAA
[ENA]
¡û
>W121046803
AIDW01000013
Alphaproteobacteria
Sphingomonas sp. PAMC 26621 [AIDW]
56014
56098
+
Leu
CAA
[ENA]
¡û
>W1610735358
LMML01000028
Alphaproteobacteria
Methylobacterium sp. Leaf89 [LMML]
906450
906534
+
Leu
CAA
[ENA]
¡û
>W1610736015
LMMZ01000001
Alphaproteobacteria
Methylobacterium sp. Leaf104 [LMMZ]
391948
392032
+
Leu
CAA
[ENA]
¡û
>W1610736232
LMND01000012
Alphaproteobacteria
Methylobacterium sp. Leaf108 [LMND]
22797
22713
-
Leu
CAA
[ENA]
¡û
>W1610736261
LMNE01000005
Alphaproteobacteria
Methylobacterium sp. Leaf111 [LMNE]
7046
6962
-
Leu
CAA
[ENA]
¡û
>W1610736982
LMNU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf125 [LMNU]
1090400
1090484
+
Leu
CAA
[ENA]
¡û
>W1610740154
LMQK01000031
Alphaproteobacteria
Methylobacterium sp. Leaf399 [LMQK]
242838
242922
+
Leu
CAA
[ENA]
¡û
>W1610740976
LMRC01000031
Alphaproteobacteria
Methylobacterium sp. Leaf466 [LMRC]
288490
288406
-
Leu
CAA
[ENA]
¡û
>W1710512364
FMZJ01000001
Alphaproteobacteria
Sphingomonas sp. YR710 [FMZJ]
92933
93017
+
Leu
CAA
[ENA]
¡û
Identical group No.186203 (25 seq.)
>W1710870169
LMKH01000023
Alphaproteobacteria
Sphingomonas sp. Leaf208 [LMKH]
279769
279685
-
Leu
CAA
[ENA]
¡û
>W1710870885
LMKW01000009
Alphaproteobacteria
Sphingomonas sp. Leaf230 [LMKW]
140556
140640
+
Leu
CAA
[ENA]
¡û
>W1710870949
LMKX01000009
Alphaproteobacteria
Sphingomonas sp. Leaf28 [LMKX]
3482
3566
+
Leu
CAA
[ENA]
¡û
>W1710871188
LMLC01000004
Alphaproteobacteria
Sphingomonas sp. Leaf34 [LMLC]
403107
403191
+
Leu
CAA
[ENA]
¡û
>W1710871210
LMLD01000008
Alphaproteobacteria
Sphingomonas sp. Leaf38 [LMLD]
245894
245810
-
Leu
CAA
[ENA]
¡û
>W1710872310
LMLW01000009
Alphaproteobacteria
Sphingomonas sp. Leaf242 [LMLW]
616905
616989
+
Leu
CAA
[ENA]
¡û
>W1710877224
LMPX01000002
Alphaproteobacteria
Sphingomonas sp. Leaf198 [LMPX]
376305
376221
-
Leu
CAA
[ENA]
¡û
>C191163743
CP039249
Alphaproteobacteria
Sphingomonas sp. PAMC26645 [CP039249]
1637564
1637648
+
Leu
CAA
-
¡û
>W1810476690
QAOF01000001
Alphaproteobacteria
Sphingomonas sp. PP-CE-3G-477 [QAOF]
588725
588809
+
Leu
CAA
[ENA]
¡û
>W1810476751
QAOG01000002
Alphaproteobacteria
Sphingomonas aurantiaca MA101b [QAOG]
314177
314261
+
Leu
CAA
[ENA]
¡û
>W1810486876
QAYE01000001
Alphaproteobacteria
Sphingomonas faeni MA-olki [QAYE]
782444
782528
+
Leu
CAA
[ENA]
¡û
>SRA1014107
SRR023845.2023
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
196
112
-
Leu
CAA
[SRA]
>SRA1014133
SRR023845.12934
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
150
234
+
Leu
CAA
[SRA]
>SRA1015359
SRR023846.29998
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
43
127
+
Leu
CAA
[SRA]
>SRA1016414
SRR023846.487515
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
126
210
+
Leu
CAA
[SRA]
>SRA1016439
SRR023846.498139
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
156
72
-
Leu
CAA
[SRA]
>SRA1016533
SRR023846.546608
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
33
117
+
Leu
CAA
[SRA]
>W1610732515
LMKH01000023
Alphaproteobacteria
Sphingomonas sp. Leaf208 [LMKH]
279769
279685
-
Leu
CAA
[ENA]
¡û
>W1610733231
LMKW01000009
Alphaproteobacteria
Sphingomonas sp. Leaf230 [LMKW]
140556
140640
+
Leu
CAA
[ENA]
¡û
>W1610733295
LMKX01000009
Alphaproteobacteria
Sphingomonas sp. Leaf28 [LMKX]
3482
3566
+
Leu
CAA
[ENA]
¡û
>W1610733534
LMLC01000004
Alphaproteobacteria
Sphingomonas sp. Leaf34 [LMLC]
403107
403191
+
Leu
CAA
[ENA]
¡û
>W1610733556
LMLD01000008
Alphaproteobacteria
Sphingomonas sp. Leaf38 [LMLD]
245894
245810
-
Leu
CAA
[ENA]
¡û
>W1610734656
LMLW01000009
Alphaproteobacteria
Sphingomonas sp. Leaf242 [LMLW]
616905
616989
+
Leu
CAA
[ENA]
¡û
>W1610739570
LMPX01000002
Alphaproteobacteria
Sphingomonas sp. Leaf198 [LMPX]
376305
376221
-
Leu
CAA
[ENA]
¡û
>W1710571530
FOVZ01000003
Alphaproteobacteria
Sphingomonas sp. OK281 [FOVZ]
427626
427542
-
Leu
CAA
[ENA]
¡û
Identical group No.193732 (14 seq.)
>WENV183723857
PEAW01027817
[PEAW] mollusc metagenome; combination of 3 Haliotis diversicolor samples: VC2003, Pt131, and Pt118; samples were filtered
189
270
+
Leu
CAA
[ENA]
¢þ
>SRA1014207
SRR023845.38846
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
63
144
+
Leu
CAA
[SRA]
>SRA1014219
SRR023845.43596
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
88
169
+
Leu
CAA
[SRA]
>SRA1014401
SRR023845.121118
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
86
5
-
Leu
CAA
[SRA]
>SRA1014575
SRR023845.207611
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
94
175
+
Leu
CAA
[SRA]
>SRA1014784
SRR023845.313897
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
208
127
-
Leu
CAA
[SRA]
>SRA1015174
SRR023845.487818
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
147
66
-
Leu
CAA
[SRA]
>SRA1015349
SRR023846.27687
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
158
77
-
Leu
CAA
[SRA]
>SRA1015553
SRR023846.109522
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
150
231
+
Leu
CAA
[SRA]
>SRA1015666
SRR023846.151275
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
3
84
+
Leu
CAA
[SRA]
>SRA1015855
SRR023846.230292
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
45
126
+
Leu
CAA
[SRA]
>SRA1016116
SRR023846.353657
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
2
83
+
Leu
CAA
[SRA]
>SRA1016300
SRR023846.439928
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
19
100
+
Leu
CAA
[SRA]
>SRA1016340
SRR023846.458877
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
238
157
-
Leu
CAA
[SRA]
Identical group No.193733 (24 seq.)
>W1710869917
LMKC01000001
Alphaproteobacteria
Sphingomonas sp. Leaf9 [LMKC]
267150
267066
-
Leu
CAA
[ENA]
¡û
>W1710870003
LMKE01000001
Alphaproteobacteria
Sphingomonas sp. Leaf10 [LMKE]
124323
124407
+
Leu
CAA
[ENA]
¡û
>W1710870102
LMKG01000001
Alphaproteobacteria
Sphingomonas sp. Leaf11 [LMKG]
267002
266918
-
Leu
CAA
[ENA]
¡û
>W1710870297
LMKJ01000015
Alphaproteobacteria
Sphingomonas sp. Leaf16 [LMKJ]
22458
22374
-
Leu
CAA
[ENA]
¡û
>W1710870649
LMKR01000003
Alphaproteobacteria
Sphingomonas sp. Leaf23 [LMKR]
544191
544275
+
Leu
CAA
[ENA]
¡û
>W1710870803
LMKU01000029
Alphaproteobacteria
Sphingomonas sp. Leaf25 [LMKU]
17075
16991
-
Leu
CAA
[ENA]
¡û
>W1710871015
LMKY01000013
Alphaproteobacteria
Sphingomonas sp. Leaf29 [LMKY]
22418
22334
-
Leu
CAA
[ENA]
¡û
>W1710871105
LMLA01000011
Alphaproteobacteria
Sphingomonas sp. Leaf32 [LMLA]
22473
22389
-
Leu
CAA
[ENA]
¡û
>W1710871313
LMLF01000005
Alphaproteobacteria
Sphingomonas sp. Leaf42 [LMLF]
606647
606731
+
Leu
CAA
[ENA]
¡û
>W1710877999
LMQO01000003
Alphaproteobacteria
Sphingomonas sp. Leaf407 [LMQO]
606707
606791
+
Leu
CAA
[ENA]
¡û
>WENV183528990
ONZX01025816
[ONZX] human gut metagenome; human gut
671
755
+
Leu
CAA
[ENA]
¢þ
>SRA1014443
SRR023845.144471
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
271
187
-
Leu
CAA
[SRA]
>SRA1014889
SRR023845.364886
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
145
61
-
Leu
CAA
[SRA]
>SRA1016434
SRR023846.494929
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
158
74
-
Leu
CAA
[SRA]
>W1610732263
LMKC01000001
Alphaproteobacteria
Sphingomonas sp. Leaf9 [LMKC]
267150
267066
-
Leu
CAA
[ENA]
¡û
>W1610732349
LMKE01000001
Alphaproteobacteria
Sphingomonas sp. Leaf10 [LMKE]
124323
124407
+
Leu
CAA
[ENA]
¡û
>W1610732448
LMKG01000001
Alphaproteobacteria
Sphingomonas sp. Leaf11 [LMKG]
267002
266918
-
Leu
CAA
[ENA]
¡û
>W1610732643
LMKJ01000015
Alphaproteobacteria
Sphingomonas sp. Leaf16 [LMKJ]
22458
22374
-
Leu
CAA
[ENA]
¡û
>W1610732995
LMKR01000003
Alphaproteobacteria
Sphingomonas sp. Leaf23 [LMKR]
544191
544275
+
Leu
CAA
[ENA]
¡û
>W1610733149
LMKU01000029
Alphaproteobacteria
Sphingomonas sp. Leaf25 [LMKU]
17075
16991
-
Leu
CAA
[ENA]
¡û
>W1610733361
LMKY01000013
Alphaproteobacteria
Sphingomonas sp. Leaf29 [LMKY]
22418
22334
-
Leu
CAA
[ENA]
¡û
>W1610733451
LMLA01000011
Alphaproteobacteria
Sphingomonas sp. Leaf32 [LMLA]
22473
22389
-
Leu
CAA
[ENA]
¡û
>W1610733659
LMLF01000005
Alphaproteobacteria
Sphingomonas sp. Leaf42 [LMLF]
606647
606731
+
Leu
CAA
[ENA]
¡û
>W1610740345
LMQO01000003
Alphaproteobacteria
Sphingomonas sp. Leaf407 [LMQO]
606707
606791
+
Leu
CAA
[ENA]
¡û
Identical group No.193738 (1 seq.)
>SRA1014659
SRR023845.248215
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
106
191
+
Leu
CAA
[SRA]
Identical group No.193740 (2 seq.)
>SRA1015044
SRR023845.434104
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
279
197
-
Leu
CAA
[SRA]
>SRA1015151
SRR023845.478268
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
278
196
-
Leu
CAA
[SRA]
Identical group No.200987 (8 seq.)
>W1710916273
LNUW01000035
Alphaproteobacteria
Agrobacterium bohemicum R89-1 [LNUW]
28005
28089
+
Leu
CAA
[ENA]
¡û
>W1910226224
FMUD01000004
Alphaproteobacteria
Agrobacterium sp. DSM 25558 [FMUD]
4215
4131
-
Leu
CAA
[ENA]
¡û
>W1910226268
FMUE01000002
Alphaproteobacteria
Agrobacterium rosae DSM 25559 [FMUE]
495602
495518
-
Leu
CAA
[ENA]
¡û
>W1911422609
NXEJ01000008
Alphaproteobacteria
Agrobacterium rosae NCPPB 1650 [NXEJ]
656500
656416
-
Leu
CAA
[ENA]
¡û
>W1810084217
PEQT01000003
Alphaproteobacteria
Agrobacterium rosae B20.3 [PEQT]
655466
655382
-
Leu
CAA
[ENA]
¡û
>W1810089072
PGEL01000025
Alphaproteobacteria
Agrobacterium bohemicum R90 [PGEL]
28004
28088
+
Leu
CAA
[ENA]
¡û
>SRA1016530
SRR023846.544874
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
87
3
-
Leu
CAA
[SRA]
>W1610774512
LNUW01000035
Alphaproteobacteria
Agrobacterium bohemicum R89-1 [LNUW]
28005
28089
+
Leu
CAA
[ENA]
¡û
Identical group No.213176 (3 seq.)
>SRA1015426
SRR023846.52461
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
96
12
-
Leu
CAA
[SRA]
>SRA1015491
SRR023846.82892
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
96
12
-
Leu
CAA
[SRA]
>SRA1015985
SRR023846.293907
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
96
12
-
Leu
CAA
[SRA]
Identical group No.213177 (1 seq.)
>SRA1015847
SRR023846.226501
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
71
153
+
Leu
CAA
[SRA]
Identical group No.213179 (1 seq.)
>SRA1016109
SRR023846.351260
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
205
121
-
Leu
CAA
[SRA]
Identical group No.213182 (1 seq.)
>SRA1016250
SRR023846.418748
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
13
97
+
Leu
CAA
[SRA]
Identical group No.218108 (16 seq.)
>W1710869667
LMJX01000002
Actinomycetota
Plantibacter sp. Leaf1 [LMJX]
240828
240911
+
Leu
CAA
[ENA]
¡û
>W1710874999
LMOB01000001
Actinomycetota
Plantibacter sp. Leaf314 [LMOB]
241035
241118
+
Leu
CAA
[ENA]
¡û
>W1710876183
LMPA01000002
Actinomycetota
Plantibacter sp. Leaf171 [LMPA]
240848
240931
+
Leu
CAA
[ENA]
¡û
>W1711173324
LWCT01000050
Actinomycetota
Plantibacter sp. H53 [LWCT]
7533
7450
-
Leu
CAA
[ENA]
¡û
>W1711461528
MJGW01000008
Actinomycetota
Plantibacter sp. MMLR14_011 [MJGW]
281823
281740
-
Leu
CAA
[ENA]
¡û
>C191101010
CP033107
Actinomycetota
Plantibacter sp. PA-3-X8 [CP033107]
2968769
2968687
-
Leu
CAA
-
¡û
>C191182568
CP040750
Actinomycetota
Plantibacter sp. M259 [CP040750]
4140407
4140326
-
Leu
CAA
-
¡û
>W1911671554
QGAE01000001
Actinomycetota
Plantibacter flavus CFBP13513 [QGAE]
240301
240383
+
Leu
CAA
[ENA]
¡û
>SRA1016535
SRR023846.547859
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
244
161
-
Leu
CAA
[SRA]
>W1610732013
LMJX01000002
Actinomycetota
Plantibacter sp. Leaf1 [LMJX]
240828
240911
+
Leu
CAA
[ENA]
¡û
>W1610737345
LMOB01000001
Actinomycetota
Plantibacter sp. Leaf314 [LMOB]
241035
241118
+
Leu
CAA
[ENA]
¡û
>W1610738529
LMPA01000002
Actinomycetota
Plantibacter sp. Leaf171 [LMPA]
240848
240931
+
Leu
CAA
[ENA]
¡û
>W1610981929
LWCT01000050
Actinomycetota
Plantibacter sp. H53 [LWCT]
7533
7450
-
Leu
CAA
[ENA]
¡û
>W1710603964
FUZO01000001
Actinomycetota
Plantibacter cousiniae [FUZO]
2404481
2404398
-
Leu
CAA
[ENA]
¡û
>W1710608072
FXAP01000001
Actinomycetota
Plantibacter flavus [FXAP]
1173923
1173840
-
Leu
CAA
[ENA]
¡û
>W1710609329
FXWJ01000002
Actinomycetota
Plantibacter sp. VKM Ac-1784 elymi [FXWJ]
166797
166880
+
Leu
CAA
[ENA]
¡û
Identical group No.221667 (1 seq.)
>SRA1014212
SRR023845.40978
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
248
165
-
Leu
CAA
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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