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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734614
PJTZ01025336
365250
Alphaproteobacteria
GCC
Gly
>WENV183734222
PJTZ01000292
96238
Alphaproteobacteria
GAG
Leu
>WENV183734619
PJTZ01025586
96238
Alphaproteobacteria
GAG
Leu
>WENV183733999
PJTZ01000015
412798
Alphaproteobacteria
CTG
Gln
>WENV183734656
PJTZ01033014
251191
Alphaproteobacteria
TAC
Val
>WENV183734421
PJTZ01006542
29895
Alphaproteobacteria
TGA
Ser
>WENV183734548
PJTZ01016856
59361
Alphaproteobacteria
GAG
Leu
>WENV183734042
PJTZ01000024
306070
Alphaproteobacteria
CCA
Trp
>WENV183734242
PJTZ01000367
58865
Alphaproteobacteria
GAG
Leu
>WENV183734018
PJTZ01000019
237489
Alphaproteobacteria
CAT
Met
>WENV183734383
PJTZ01004219
193550
Alphaproteobacteria
TCT
Arg
>WENV183734270
PJTZ01000691
147152
Alphaproteobacteria
ACG
Arg
>WENV183734269
PJTZ01000691
147152
Alphaproteobacteria
ACG
Arg
>WENV183733902
PJTZ01000001
147152
Alphaproteobacteria
ACG
Arg
>WENV183733901
PJTZ01000001
147152
Alphaproteobacteria
ACG
Arg
>WENV183734227
PJTZ01000298
81064
Alphaproteobacteria
GTA
Tyr
>WENV183734245
PJTZ01000418
191197
Alphaproteobacteria
CCG
Arg
>WENV183734012
PJTZ01000019
146875
Alphaproteobacteria
GTG
His
>WENV183733992
PJTZ01000014
31286
Alphaproteobacteria
GGA
Ser
>WENV183734571
PJTZ01019321
338286
Alphaproteobacteria
TTG
Gln
>WENV183734328
PJTZ01002325
148279
Alphaproteobacteria
TCT
Arg
>WENV183733953
PJTZ01000006
256971
Alphaproteobacteria
TGT
Thr
>WENV183734524
PJTZ01015182
23561
Alphaproteobacteria
GGA
Ser
>WENV183734355
PJTZ01003077
401702
Alphaproteobacteria
>WENV183734296
PJTZ01001255
165860
Alphaproteobacteria
TGG
Pro
>WENV183734019
PJTZ01000019
165860
Alphaproteobacteria
TGG
Pro
>WENV183734022
PJTZ01000020
185767
Alphaproteobacteria
CCG
Arg
>WENV183734283
PJTZ01001026
239035
Alphaproteobacteria
CGC
Ala
>WENV183734350
PJTZ01002914
236134
Alphaproteobacteria
TAC
Val
>WENV183734300
PJTZ01001324
236134
Alphaproteobacteria
TAC
Val
>WENV183734521
PJTZ01014473
23620
Alphaproteobacteria
GCT
Ser
>WENV183734338
PJTZ01002484
108283
Alphaproteobacteria
CAA
Leu
>WENV183734237
PJTZ01000332
108283
Alphaproteobacteria
CAA
Leu
>WENV183733972
PJTZ01000010
385404
Alphaproteobacteria
CTC
Glu
>WENV183734625
PJTZ01026120
338289
Alphaproteobacteria
GAC
Val
>WENV183734103
PJTZ01000059
339495
Alphaproteobacteria
>WENV183733998
PJTZ01000015
236004
Alphaproteobacteria
TTT
Lys
>WENV183734280
PJTZ01000966
24459
Alphaproteobacteria
CGA
Ser
>WENV183733947
PJTZ01000006
319584
Alphaproteobacteria
CGC
Ala
>WENV183734143
PJTZ01000090
97145
Alphaproteobacteria
TAG
Leu
>WENV183734453
PJTZ01008193
319095
Alphaproteobacteria
TAC
Val
>WENV183734480
PJTZ01010090
173246
Alphaproteobacteria
CCT
Arg
>WENV183734292
PJTZ01001123
239037
Alphaproteobacteria
TTT
Lys
>WENV183734013
PJTZ01000019
167926
Alphaproteobacteria
CAT
Met
>WENV183734688
PJTZ01040479
130084
Alphaproteobacteria
GGG
Pro
>WENV183734239
PJTZ01000343
294513
Alphaproteobacteria
CGT
Thr
>WENV183734315
PJTZ01001743
254653
Alphaproteobacteria
CCA
Trp
>WENV183734249
PJTZ01000471
10657
Alphaproteobacteria
GCT
Ser
>WENV183734212
PJTZ01000236
80837
Alphaproteobacteria
TAA
Leu
>WENV183734442
PJTZ01007835
338622
Alphaproteobacteria
GTT
Asn
>WENV183734267
PJTZ01000653
338622
Alphaproteobacteria
GTT
Asn
>WENV183733959
PJTZ01000007
338622
Alphaproteobacteria
GTT
Asn
>WENV183734500
PJTZ01012580
237196
Alphaproteobacteria
CGT
Thr
>WENV183734545
PJTZ01016705
10642
Alphaproteobacteria
GCT
Ser
>WENV183734402
PJTZ01005579
144972
Alphaproteobacteria
>WENV183734514
PJTZ01013556
23744
Alphaproteobacteria
TGA
Ser
>WENV183734228
PJTZ01000299
257056
Alphaproteobacteria
CGT
Thr
>WENV183734388
PJTZ01004481
24994
Alphaproteobacteria
GGA
Ser
>WENV183734695
PJTZ01042092
352191
Alphaproteobacteria
GGT
Thr
>WENV183734020
PJTZ01000020
369678
Alphaproteobacteria
GGT
Thr
>WENV183734551
PJTZ01017215
144969
Alphaproteobacteria
CGG
Pro
>WENV183734098
PJTZ01000057
428521
Alphaproteobacteria
CTG
Gln
>WENV183734668
PJTZ01035479
23743
Alphaproteobacteria
GCT
Ser
>WENV183733949
PJTZ01000006
21074
Alphaproteobacteria
GGA
Ser
>WENV183734547
PJTZ01016719
338331
Alphaproteobacteria
>WENV183734546
PJTZ01016719
338331
Alphaproteobacteria
>WENV183734427
PJTZ01007174
95631
Alphaproteobacteria
TAG
Leu
>WENV183734236
PJTZ01000329
23572
Alphaproteobacteria
TGA
Ser
>WENV183733893
PJTZ01000001
101826
Alphaproteobacteria
TAG
Leu
>WENV183734156
PJTZ01000112
237579
Alphaproteobacteria
CTT
Lys
>WENV183733997
PJTZ01000015
62052
Alphaproteobacteria
GAG
Leu
>WENV183734304
PJTZ01001451
159151
Alphaproteobacteria
GGG
Pro
>WENV183734021
PJTZ01000020
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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