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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183741396
PJUG01000003
147867
Bacteroidota
GTG
His
>WENV183741397
PJUG01000003
119517
Bacteroidota
CAA
Leu
>WENV183741394
PJUG01000003
235822
Bacteroidota
TGT
Thr
>WENV183741395
PJUG01000003
237427
Bacteroidota
TGT
Thr
>WENV183741393
PJUG01000003
237427
Bacteroidota
TGT
Thr
>WENV183741406
PJUG01000005
127215
Bacteroidota
TAC
Val
>WENV183741404
PJUG01000005
127215
Bacteroidota
TAC
Val
>WENV183741408
PJUG01000005
238600
Bacteroidota
CAT
Met
>WENV183741409
PJUG01000005
238600
Bacteroidota
CAT
Met
>WENV183741407
PJUG01000005
238600
Bacteroidota
CAT
Met
>WENV183741405
PJUG01000005
126680
Bacteroidota
TAC
Val
>WENV183741415
PJUG01000006
59351
Bacteroidota
GAG
Leu
>WENV183741413
PJUG01000006
199370
Bacteroidota
GTT
Asn
>WENV183741437
PJUG01000012
147867
Bacteroidota
GTG
His
>WENV183741439
PJUG01000012
45276
Bacteroidota
TGA
Ser
>WENV183741448
PJUG01000013
412419
Bacteroidota
CCA
Trp
>WENV183741446
PJUG01000013
267805
Bacteroidota
TCC
Gly
>WENV183741447
PJUG01000013
342824
Bacteroidota
GGT
Thr
>WENV183741444
PJUG01000013
235822
Bacteroidota
TGT
Thr
>WENV183741474
PJUG01000022
119517
Bacteroidota
CAA
Leu
>WENV183741472
PJUG01000022
51937
Bacteroidota
TAA
Leu
>WENV183741499
PJUG01000031
147864
Bacteroidota
TGG
Pro
>WENV183741498
PJUG01000031
147864
Bacteroidota
TGG
Pro
>WENV183741497
PJUG01000031
147864
Bacteroidota
TGG
Pro
>WENV183741500
PJUG01000031
411719
Bacteroidota
GCA
Cys
>WENV183741496
PJUG01000031
147863
Bacteroidota
CAT
Met
>WENV183741495
PJUG01000031
147863
Bacteroidota
CAT
Met
>WENV183741519
PJUG01000037
235817
Bacteroidota
GAA
Phe
>WENV183741522
PJUG01000041
238600
Bacteroidota
CAT
Met
>WENV183741583
PJUG01000094
340605
Bacteroidota
TTC
Glu
>WENV183741582
PJUG01000094
340605
Bacteroidota
TTC
Glu
>WENV183741581
PJUG01000094
340028
Bacteroidota
TTC
Glu
>WENV183741589
PJUG01000110
45276
Bacteroidota
TGA
Ser
>WENV183741588
PJUG01000110
45276
Bacteroidota
TGA
Ser
>WENV183741586
PJUG01000110
51937
Bacteroidota
TAA
Leu
>WENV183741590
PJUG01000116
168744
Bacteroidota
GTG
His
>WENV183741591
PJUG01000121
412441
Bacteroidota
TTG
Gln
>WENV183741594
PJUG01000131
48896
Bacteroidota
>WENV183741595
PJUG01000139
238673
Bacteroidota
GAA
Phe
>WENV183741596
PJUG01000139
238673
Bacteroidota
GAA
Phe
>WENV183741600
PJUG01000156
412441
Bacteroidota
TTG
Gln
>WENV183741602
PJUG01000167
278595
Bacteroidota
CAT
Met
>WENV183741601
PJUG01000167
278595
Bacteroidota
CAT
Met
>WENV183741603
PJUG01000170
25279
Bacteroidota
GGA
Ser
>WENV183741604
PJUG01000176
119530
Bacteroidota
CAA
Leu
>WENV183741605
PJUG01000178
146962
Bacteroidota
CAT
Met
>WENV183741606
PJUG01000180
48896
Bacteroidota
>WENV183741609
PJUG01000187
366237
Bacteroidota
GTT
Asn
>WENV183741617
PJUG01000188
113760
Bacteroidota
GTA
Tyr
>WENV183741616
PJUG01000188
147941
Bacteroidota
TGT
Thr
>WENV183741618
PJUG01000192
428524
Bacteroidota
GCA
Cys
>WENV183741619
PJUG01000195
179613
Bacteroidota
CAT
Met
>WENV183741624
PJUG01000216
176247
Bacteroidota
TCT
Arg
>WENV183741622
PJUG01000216
45935
Bacteroidota
GCT
Ser
>WENV183741627
PJUG01000229
127221
Bacteroidota
TAC
Val
>WENV183741626
PJUG01000229
127221
Bacteroidota
TAC
Val
>WENV183741629
PJUG01000231
176247
Bacteroidota
TCT
Arg
>WENV183741631
PJUG01000244
165001
Bacteroidota
GTT
Asn
>WENV183741632
PJUG01000244
165001
Bacteroidota
GTT
Asn
>WENV183741636
PJUG01000269
61800
Bacteroidota
TAA
Leu
>WENV183741635
PJUG01000269
238670
Bacteroidota
GCC
Gly
>WENV183741637
PJUG01000269
96124
Bacteroidota
TAG
Leu
>WENV183741634
PJUG01000269
96124
Bacteroidota
TAG
Leu
>WENV183741640
PJUG01000273
268513
Bacteroidota
TCC
Gly
>WENV183741638
PJUG01000273
268513
Bacteroidota
TCC
Gly
>WENV183741641
PJUG01000273
340152
Bacteroidota
GGT
Thr
>WENV183741639
PJUG01000273
113760
Bacteroidota
GTA
Tyr
>WENV183741642
PJUG01000273
412494
Bacteroidota
CCA
Trp
>WENV183741645
PJUG01000276
147942
Bacteroidota
GTC
Asp
>WENV183741644
PJUG01000276
147942
Bacteroidota
GTC
Asp
>WENV183741643
PJUG01000276
147942
Bacteroidota
GTC
Asp
>WENV183741646
PJUG01000284
343560
Bacteroidota
TCG
Arg
>WENV183741651
PJUG01000337
238872
Bacteroidota
TTT
Lys
>WENV183741650
PJUG01000337
238872
Bacteroidota
TTT
Lys
>WENV183741648
PJUG01000337
238872
Bacteroidota
TTT
Lys
>WENV183741649
PJUG01000337
82649
Bacteroidota
GAG
Leu
>WENV183741657
PJUG01000355
416655
Bacteroidota
>WENV183741655
PJUG01000355
148163
Bacteroidota
TTT
Lys
>WENV183741672
PJUG01000567
237429
Bacteroidota
TTT
Lys
>WENV183741694
PJUG01001360
340193
Bacteroidota
TTC
Glu
>WENV183741712
PJUG01002044
237429
Bacteroidota
TTT
Lys
>WENV183741732
PJUG01003899
25256
Bacteroidota
GCT
Ser
>WENV183741733
PJUG01003899
145151
Bacteroidota
TGG
Pro
>WENV183741740
PJUG01004955
164080
Bacteroidota
TCT
Arg
>WENV183741747
PJUG01005964
340303
Bacteroidota
CCT
Arg
>WENV183741758
PJUG01007121
148416
Bacteroidota
GTT
Asn
>WENV183741781
PJUG01011144
145151
Bacteroidota
TGG
Pro
>WENV183741848
PJUG01027386
267805
Bacteroidota
TCC
Gly
>WENV183741847
PJUG01027386
81622
Bacteroidota
GTA
Tyr
>WENV183741865
PJUG01032419
238600
Bacteroidota
CAT
Met
>WENV183741864
PJUG01032419
238600
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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