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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11102008
AGFT01044904
400361
Gammaproteobacteria
TCC
Gly
>WENV170001936
AGFT01044904
400361
Gammaproteobacteria
TCC
Gly
>WENV11102164
AGFT01110679
117900
Gammaproteobacteria
GTA
Tyr
>WENV170002092
AGFT01110679
117900
Gammaproteobacteria
GTA
Tyr
>WENV11102204
AGFT01123571
480351
Gammaproteobacteria
CCC
Gly
>WENV170002132
AGFT01123571
480351
Gammaproteobacteria
CCC
Gly
>WENV11102054
AGFT01058818
481246
Gammaproteobacteria
GCA
Cys
>WENV170001982
AGFT01058818
481246
Gammaproteobacteria
GCA
Cys
>WENV170001850
AGFT01008650
404084
Gammaproteobacteria
CTG
Gln
>WENV170002038
AGFT01080993
404084
Gammaproteobacteria
CTG
Gln
>WENV11101965
AGFT01030820
100262
Gammaproteobacteria
CAG
Leu
>WENV170001893
AGFT01030820
100262
Gammaproteobacteria
CAG
Leu
>WENV11102109
AGFT01080948
281314
Gammaproteobacteria
TGT
Thr
>WENV170002037
AGFT01080948
281314
Gammaproteobacteria
TGT
Thr
>WENV11102165
AGFT01111150
56092
Gammaproteobacteria
TGA
Ser
>WENV170002093
AGFT01111150
56092
Gammaproteobacteria
TGA
Ser
>WENV11101978
AGFT01036660
401696
Gammaproteobacteria
TTG
Gln
>WENV170001906
AGFT01036660
401696
Gammaproteobacteria
TTG
Gln
>WENV11102132
AGFT01094175
284397
Gammaproteobacteria
GAA
Phe
>WENV170002060
AGFT01094175
284397
Gammaproteobacteria
GAA
Phe
>WENV11102028
AGFT01049936
481357
Gammaproteobacteria
GCA
Cys
>WENV170001956
AGFT01049936
481357
Gammaproteobacteria
GCA
Cys
>WENV11102190
AGFT01119619
183736
Gammaproteobacteria
TCT
Arg
>WENV170002118
AGFT01119619
183736
Gammaproteobacteria
TCT
Arg
>WENV11102081
AGFT01070974
117901
Gammaproteobacteria
GTA
Tyr
>WENV11102083
AGFT01071264
117901
Gammaproteobacteria
GTA
Tyr
>WENV170001909
AGFT01036941
401199
Gammaproteobacteria
TCC
Gly
>WENV170001927
AGFT01042631
401199
Gammaproteobacteria
TCC
Gly
>WENV170001997
AGFT01065639
401199
Gammaproteobacteria
TCC
Gly
>WENV170002024
AGFT01075825
401199
Gammaproteobacteria
TCC
Gly
>WENV11101981
AGFT01036941
401199
Gammaproteobacteria
TCC
Gly
>WENV11101999
AGFT01042631
401199
Gammaproteobacteria
TCC
Gly
>WENV11102069
AGFT01065639
401199
Gammaproteobacteria
TCC
Gly
>WENV11102096
AGFT01075825
401199
Gammaproteobacteria
TCC
Gly
>WENV11102084
AGFT01071632
119279
Gammaproteobacteria
GTA
Tyr
>WENV11102154
AGFT01106299
119279
Gammaproteobacteria
GTA
Tyr
>WENV170002012
AGFT01071632
119279
Gammaproteobacteria
GTA
Tyr
>WENV170002082
AGFT01106299
119279
Gammaproteobacteria
GTA
Tyr
>WENV11101967
AGFT01031231
285918
Gammaproteobacteria
GTG
His
>WENV11102215
AGFT01126983
285918
Gammaproteobacteria
GTG
His
>WENV11102248
AGFT01139401
402711
Gammaproteobacteria
>WENV170002176
AGFT01139401
402711
Gammaproteobacteria
>WENV170002032
AGFT01079771
185197
Gammaproteobacteria
GAC
Val
>WENV170001896
AGFT01031231
74049
Gammaproteobacteria
CAG
Leu
>WENV170001922
AGFT01041246
74049
Gammaproteobacteria
CAG
Leu
>WENV11101968
AGFT01031231
74049
Gammaproteobacteria
CAG
Leu
>WENV11101994
AGFT01041246
74049
Gammaproteobacteria
CAG
Leu
>WENV11102168
AGFT01112443
399345
Gammaproteobacteria
TCC
Gly
>WENV170002096
AGFT01112443
399345
Gammaproteobacteria
TCC
Gly
>WENV11102120
AGFT01084686
99863
Gammaproteobacteria
CAG
Leu
>WENV170002048
AGFT01084686
99863
Gammaproteobacteria
CAG
Leu
>WENV170002108
AGFT01115883
289050
Gammaproteobacteria
CCA
Trp
>WENV11102214
AGFT01126983
179440
Gammaproteobacteria
CCG
Arg
>WENV170002142
AGFT01126983
179440
Gammaproteobacteria
CCG
Arg
>WENV170001876
AGFT01018760
286016
Gammaproteobacteria
TTT
Lys
>WENV170002069
AGFT01100789
286016
Gammaproteobacteria
TTT
Lys
>WENV170002078
AGFT01104804
286016
Gammaproteobacteria
TTT
Lys
>WENV170002169
AGFT01134565
286016
Gammaproteobacteria
TTT
Lys
>WENV11101948
AGFT01018760
286016
Gammaproteobacteria
TTT
Lys
>WENV11102141
AGFT01100789
286016
Gammaproteobacteria
TTT
Lys
>WENV11102150
AGFT01104804
286016
Gammaproteobacteria
TTT
Lys
>WENV11102241
AGFT01134565
286016
Gammaproteobacteria
TTT
Lys
>WENV11102060
AGFT01060662
285336
Gammaproteobacteria
GTG
His
>WENV11101934
AGFT01014250
281352
Gammaproteobacteria
TGT
Thr
>WENV170001862
AGFT01014250
281352
Gammaproteobacteria
TGT
Thr
>WENV11102034
AGFT01052851
480368
Gammaproteobacteria
CCC
Gly
>WENV170001962
AGFT01052851
480368
Gammaproteobacteria
CCC
Gly
>WENV170001943
AGFT01046679
76278
Gammaproteobacteria
TAA
Leu
>WENV11102011
AGFT01045727
179582
Gammaproteobacteria
TCT
Arg
>WENV11102130
AGFT01091498
179582
Gammaproteobacteria
TCT
Arg
>WENV170001939
AGFT01045727
179582
Gammaproteobacteria
TCT
Arg
>WENV170002058
AGFT01091498
179582
Gammaproteobacteria
TCT
Arg
>WENV11102006
AGFT01044904
180975
Gammaproteobacteria
CAT
Met
>WENV11102128
AGFT01089713
180975
Gammaproteobacteria
CAT
Met
>WENV170001934
AGFT01044904
180975
Gammaproteobacteria
CAT
Met
>WENV170002056
AGFT01089713
180975
Gammaproteobacteria
CAT
Met
>WENV170002043
AGFT01082992
288893
Gammaproteobacteria
GTT
Asn
>WENV11102049
AGFT01055758
4101
Gammaproteobacteria
>WENV170001977
AGFT01055758
4101
Gammaproteobacteria
>WENV11101954
AGFT01022618
117930
Gammaproteobacteria
CAA
Leu
>WENV170001882
AGFT01022618
117930
Gammaproteobacteria
CAA
Leu
>WENV11102104
AGFT01079771
179267
Gammaproteobacteria
GAC
Val
>WENV11102129
AGFT01089981
281354
Gammaproteobacteria
CCA
Trp
>WENV170002057
AGFT01089981
281354
Gammaproteobacteria
CCA
Trp
>WENV11102074
AGFT01067016
284990
Gammaproteobacteria
TGT
Thr
>WENV170002002
AGFT01067016
284990
Gammaproteobacteria
TGT
Thr
>WENV11102093
AGFT01073816
178419
Gammaproteobacteria
GAC
Val
>WENV11101922
AGFT01008650
401203
Gammaproteobacteria
>WENV11102110
AGFT01080993
401203
Gammaproteobacteria
>WENV11102175
AGFT01114788
119263
Gammaproteobacteria
TAG
Leu
>WENV170002103
AGFT01114788
119263
Gammaproteobacteria
TAG
Leu
>WENV11102246
AGFT01137519
176051
Gammaproteobacteria
>WENV11102022
AGFT01048301
480510
Gammaproteobacteria
>WENV170001950
AGFT01048301
480510
Gammaproteobacteria
>WENV11102191
AGFT01119967
118321
Gammaproteobacteria
TAG
Leu
>WENV170002119
AGFT01119967
118321
Gammaproteobacteria
TAG
Leu
>WENV11102023
AGFT01048301
73164
Gammaproteobacteria
TAA
Leu
>WENV170001951
AGFT01048301
73164
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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