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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
190 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170599727
FUWD010088820
275457
Gammaproteobacteria
ACG
Arg
>WENV170620240
FUWD013028059
275457
Gammaproteobacteria
ACG
Arg
>WENV170628375
FUWD013245797
275457
Gammaproteobacteria
ACG
Arg
>WENV170604069
FUWD010359023
273854
Gammaproteobacteria
CAT
Met
>WENV170605313
FUWD010471122
271464
Gammaproteobacteria
TGG
Pro
>WENV170619182
FUWD013003881
271464
Gammaproteobacteria
TGG
Pro
>WENV170620560
FUWD013033915
271464
Gammaproteobacteria
TGG
Pro
>WENV170624932
FUWD013189003
271464
Gammaproteobacteria
TGG
Pro
>WENV170624935
FUWD013189004
271464
Gammaproteobacteria
TGG
Pro
>WENV170628702
FUWD013251322
271464
Gammaproteobacteria
TGG
Pro
>WENV170633189
FUWD013392670
271464
Gammaproteobacteria
TGG
Pro
>WENV170633192
FUWD013392671
271464
Gammaproteobacteria
TGG
Pro
>WENV170603724
FUWD010331558
274150
Gammaproteobacteria
CAT
Met
>WENV170608907
FUWD011170110
274150
Gammaproteobacteria
CAT
Met
>WENV170619385
FUWD013012493
274150
Gammaproteobacteria
CAT
Met
>WENV170619386
FUWD013012494
274150
Gammaproteobacteria
CAT
Met
>WENV170615826
FUWD012869583
453181
Gammaproteobacteria
GTG
His
>WENV170604101
FUWD010363993
301036
Gammaproteobacteria
GAT
Ile
>WENV170623763
FUWD013170612
281705
Gammaproteobacteria
GAT
Ile
>WENV170632038
FUWD013377684
281705
Gammaproteobacteria
GAT
Ile
>WENV170632032
FUWD013377649
270982
Gammaproteobacteria
GAT
Ile
>WENV170629642
FUWD013276461
270982
Gammaproteobacteria
GAT
Ile
>WENV170628253
FUWD013244070
270982
Gammaproteobacteria
GAT
Ile
>WENV170628095
FUWD013241685
270982
Gammaproteobacteria
GAT
Ile
>WENV170623757
FUWD013170573
270982
Gammaproteobacteria
GAT
Ile
>WENV170621460
FUWD013060227
270982
Gammaproteobacteria
GAT
Ile
>WENV170620121
FUWD013026217
270982
Gammaproteobacteria
GAT
Ile
>WENV170619965
FUWD013023636
270982
Gammaproteobacteria
GAT
Ile
>WENV170617610
FUWD012932106
270982
Gammaproteobacteria
GAT
Ile
>WENV170617364
FUWD012923490
270982
Gammaproteobacteria
GAT
Ile
>WENV170617362
FUWD012923489
270982
Gammaproteobacteria
GAT
Ile
>WENV170615986
FUWD012873747
270982
Gammaproteobacteria
GAT
Ile
>WENV170615984
FUWD012873746
270982
Gammaproteobacteria
GAT
Ile
>WENV170615981
FUWD012873494
270982
Gammaproteobacteria
GAT
Ile
>WENV170615979
FUWD012873493
270982
Gammaproteobacteria
GAT
Ile
>WENV170615973
FUWD012873317
270982
Gammaproteobacteria
GAT
Ile
>WENV170615971
FUWD012873316
270982
Gammaproteobacteria
GAT
Ile
>WENV170614102
FUWD012824726
270982
Gammaproteobacteria
GAT
Ile
>WENV170604947
FUWD010437402
270982
Gammaproteobacteria
GAT
Ile
>WENV170599830
FUWD010093921
270982
Gammaproteobacteria
GAT
Ile
>WENV170599608
FUWD010082251
270982
Gammaproteobacteria
GAT
Ile
>WENV170599301
FUWD010071180
270982
Gammaproteobacteria
GAT
Ile
>WENV170599219
FUWD010067484
270982
Gammaproteobacteria
GAT
Ile
>WENV170598079
FUWD010024374
270982
Gammaproteobacteria
GAT
Ile
>WENV170598084
FUWD010024559
270982
Gammaproteobacteria
GAT
Ile
>WENV170600397
FUWD010123312
455942
Gammaproteobacteria
GCC
Gly
>WENV170618214
FUWD012958444
272023
Gammaproteobacteria
GAT
Ile
>WENV170617872
FUWD012940743
272023
Gammaproteobacteria
GAT
Ile
>WENV170614290
FUWD012829434
272023
Gammaproteobacteria
GAT
Ile
>WENV170613988
FUWD012823288
272023
Gammaproteobacteria
GAT
Ile
>WENV170606757
FUWD010727152
272023
Gammaproteobacteria
GAT
Ile
>WENV170597522
FUWD010004103
272023
Gammaproteobacteria
GAT
Ile
>WENV170602648
FUWD010250464
467367
Gammaproteobacteria
GGT
Thr
>WENV170629879
FUWD013284883
87529
Gammaproteobacteria
GGA
Ser
>WENV170621693
FUWD013069168
87529
Gammaproteobacteria
GGA
Ser
>WENV170607309
FUWD010801631
87529
Gammaproteobacteria
GGA
Ser
>WENV170623761
FUWD013170603
307350
Gammaproteobacteria
GAT
Ile
>WENV170632036
FUWD013377674
307350
Gammaproteobacteria
GAT
Ile
>WENV170606753
FUWD010727013
452413
Gammaproteobacteria
GGC
Ala
>WENV170620465
FUWD013032232
454388
Gammaproteobacteria
TAC
Val
>WENV170628608
FUWD013249700
454388
Gammaproteobacteria
TAC
Val
>WENV170619134
FUWD013001542
463383
Gammaproteobacteria
CCA
Trp
>WENV170619135
FUWD013001543
463383
Gammaproteobacteria
CCA
Trp
>WENV170606332
FUWD010650934
455188
Gammaproteobacteria
TAC
Val
>WENV170597987
FUWD010022021
276976
Gammaproteobacteria
TCT
Arg
>WENV170615825
FUWD012869583
276976
Gammaproteobacteria
TCT
Arg
>WENV170633566
FUWD013398773
284535
Gammaproteobacteria
CCG
Arg
>WENV170632635
FUWD013385425
284535
Gammaproteobacteria
CCG
Arg
>WENV170630808
FUWD013325496
284535
Gammaproteobacteria
CCG
Arg
>WENV170628787
FUWD013253097
284535
Gammaproteobacteria
CCG
Arg
>WENV170625327
FUWD013196072
284535
Gammaproteobacteria
CCG
Arg
>WENV170624348
FUWD013180216
284535
Gammaproteobacteria
CCG
Arg
>WENV170622594
FUWD013111662
284535
Gammaproteobacteria
CCG
Arg
>WENV170620640
FUWD013035807
284535
Gammaproteobacteria
CCG
Arg
>WENV170618112
FUWD012952192
284535
Gammaproteobacteria
CCG
Arg
>WENV170616403
FUWD012886580
284535
Gammaproteobacteria
CCG
Arg
>WENV170616402
FUWD012886579
284535
Gammaproteobacteria
CCG
Arg
>WENV170602594
FUWD010246180
284535
Gammaproteobacteria
CCG
Arg
>WENV170599632
FUWD010083425
284535
Gammaproteobacteria
CCG
Arg
>WENV170599567
FUWD010080361
290071
Gammaproteobacteria
GAT
Ile
>WENV170625012
FUWD013190049
290071
Gammaproteobacteria
GAT
Ile
>WENV170633268
FUWD013393545
290071
Gammaproteobacteria
GAT
Ile
>WENV170620293
FUWD013028965
780592
Gammaproteobacteria
CCC
Gly
>WENV170628424
FUWD013246633
780592
Gammaproteobacteria
CCC
Gly
>WENV170633544
FUWD013398436
456511
Gammaproteobacteria
GAA
Phe
>WENV170631647
FUWD013359924
456511
Gammaproteobacteria
GAA
Phe
>WENV170625304
FUWD013195682
456511
Gammaproteobacteria
GAA
Phe
>WENV170623377
FUWD013148790
456511
Gammaproteobacteria
GAA
Phe
>WENV170617640
FUWD012933066
456511
Gammaproteobacteria
GAA
Phe
>WENV170609923
FUWD011579758
779470
Gammaproteobacteria
GCA
Cys
>WENV170628888
FUWD013255324
272104
Gammaproteobacteria
CGG
Pro
>WENV170620745
FUWD013038142
272104
Gammaproteobacteria
CGG
Pro
>WENV170618415
FUWD012967043
272104
Gammaproteobacteria
CGG
Pro
>WENV170599916
FUWD010098151
272104
Gammaproteobacteria
CGG
Pro
>WENV170609483
FUWD011413234
30385
Gammaproteobacteria
GCT
Ser
>WENV170609847
FUWD011532319
30308
Gammaproteobacteria
TGA
Ser
>WENV170608663
FUWD011046544
460378
Gammaproteobacteria
TAC
Val
>WENV170613691
FUWD012817189
275934
Gammaproteobacteria
GGG
Pro
>WENV170609999
FUWD011620666
273090
Gammaproteobacteria
CCA
Trp
>WENV170623762
FUWD013170603
452579
Gammaproteobacteria
TGC
Ala
>WENV170632037
FUWD013377674
452579
Gammaproteobacteria
TGC
Ala
>WENV170622142
FUWD013089451
481346
Gammaproteobacteria
GTT
Asn
>WENV170630343
FUWD013304387
481346
Gammaproteobacteria
GTT
Asn
>WENV170608701
FUWD011053389
275658
Gammaproteobacteria
TGG
Pro
>WENV170600911
FUWD010147775
458426
Gammaproteobacteria
TTC
Glu
>WENV170602941
FUWD010276015
273327
Gammaproteobacteria
ACG
Arg
>WENV170606797
FUWD010733495
273327
Gammaproteobacteria
ACG
Arg
>WENV170626494
FUWD013223609
273327
Gammaproteobacteria
ACG
Arg
>WENV170630847
FUWD013327015
459731
Gammaproteobacteria
GGT
Thr
>WENV170625487
FUWD013198580
459731
Gammaproteobacteria
GGT
Thr
>WENV170624994
FUWD013189635
459731
Gammaproteobacteria
GGT
Thr
>WENV170623177
FUWD013139863
459731
Gammaproteobacteria
GGT
Thr
>WENV170622633
FUWD013113186
459731
Gammaproteobacteria
GGT
Thr
>WENV170618480
FUWD012970725
459731
Gammaproteobacteria
GGT
Thr
>WENV170617223
FUWD012918620
459731
Gammaproteobacteria
GGT
Thr
>WENV170605303
FUWD010469182
459731
Gammaproteobacteria
GGT
Thr
>WENV170601296
FUWD010165622
459731
Gammaproteobacteria
GGT
Thr
>WENV170600605
FUWD010134420
459731
Gammaproteobacteria
GGT
Thr
>WENV170599598
FUWD010081462
459731
Gammaproteobacteria
GGT
Thr
>WENV170633719
FUWD013401025
459731
Gammaproteobacteria
GGT
Thr
>WENV170631433
FUWD013352119
459731
Gammaproteobacteria
GGT
Thr
>WENV170616948
FUWD012909506
467082
Gammaproteobacteria
TGC
Ala
>WENV170615982
FUWD012873494
467082
Gammaproteobacteria
TGC
Ala
>WENV170615980
FUWD012873493
467082
Gammaproteobacteria
TGC
Ala
>WENV170615974
FUWD012873317
467082
Gammaproteobacteria
TGC
Ala
>WENV170615972
FUWD012873316
467082
Gammaproteobacteria
TGC
Ala
>WENV170615970
FUWD012873315
467082
Gammaproteobacteria
TGC
Ala
>WENV170614104
FUWD012824727
467082
Gammaproteobacteria
TGC
Ala
>WENV170614103
FUWD012824726
467082
Gammaproteobacteria
TGC
Ala
>WENV170598122
FUWD010026020
467082
Gammaproteobacteria
TGC
Ala
>WENV170598085
FUWD010024559
467082
Gammaproteobacteria
TGC
Ala
>WENV170598080
FUWD010024374
467082
Gammaproteobacteria
TGC
Ala
>WENV170606698
FUWD010712024
458525
Gammaproteobacteria
TAC
Val
>WENV170610083
FUWD011671301
458525
Gammaproteobacteria
TAC
Val
>WENV170599723
FUWD010088340
283256
Gammaproteobacteria
GAT
Ile
>WENV170605597
FUWD010515517
273121
Gammaproteobacteria
GAC
Val
>WENV170614590
FUWD012837866
780764
Gammaproteobacteria
TCC
Gly
>WENV170622406
FUWD013102193
779670
Gammaproteobacteria
CCC
Gly
>WENV170630630
FUWD013316607
779670
Gammaproteobacteria
CCC
Gly
>WENV170613326
FUWD012796613
277966
Gammaproteobacteria
CAT
Met
>WENV170598963
FUWD010056734
457459
Gammaproteobacteria
GGC
Ala
>WENV170605870
FUWD010559667
453897
Gammaproteobacteria
TAC
Val
>WENV170602428
FUWD010235456
453897
Gammaproteobacteria
TAC
Val
>WENV170615827
FUWD012869583
181084
Gammaproteobacteria
TAG
Leu
>WENV170624991
FUWD013189635
454397
Gammaproteobacteria
TGT
Thr
>WENV170626558
FUWD013225257
455237
Gammaproteobacteria
TGT
Thr
>WENV170618778
FUWD012986431
455237
Gammaproteobacteria
TGT
Thr
>WENV170601219
FUWD010161472
455237
Gammaproteobacteria
TGT
Thr
>WENV170628130
FUWD013242305
466510
Gammaproteobacteria
GCC
Gly
>WENV170624757
FUWD013186240
466510
Gammaproteobacteria
GCC
Gly
>WENV170624267
FUWD013178820
466510
Gammaproteobacteria
GCC
Gly
>WENV170623832
FUWD013171545
466510
Gammaproteobacteria
GCC
Gly
>WENV170623767
FUWD013170631
466510
Gammaproteobacteria
GCC
Gly
>WENV170619993
FUWD013024309
466510
Gammaproteobacteria
GCC
Gly
>WENV170618494
FUWD012971718
466510
Gammaproteobacteria
GCC
Gly
>WENV170617842
FUWD012939010
466510
Gammaproteobacteria
GCC
Gly
>WENV170616918
FUWD012908727
466510
Gammaproteobacteria
GCC
Gly
>WENV170616916
FUWD012908726
466510
Gammaproteobacteria
GCC
Gly
>WENV170616912
FUWD012908480
466510
Gammaproteobacteria
GCC
Gly
>WENV170615635
FUWD012863049
466510
Gammaproteobacteria
GCC
Gly
>WENV170614251
FUWD012827352
466510
Gammaproteobacteria
GCC
Gly
>WENV170614249
FUWD012827351
466510
Gammaproteobacteria
GCC
Gly
>WENV170614248
FUWD012827350
466510
Gammaproteobacteria
GCC
Gly
>WENV170613708
FUWD012817336
466510
Gammaproteobacteria
GCC
Gly
>WENV170613706
FUWD012817335
466510
Gammaproteobacteria
GCC
Gly
>WENV170613704
FUWD012817334
466510
Gammaproteobacteria
GCC
Gly
>WENV170613703
FUWD012817333
466510
Gammaproteobacteria
GCC
Gly
>WENV170613688
FUWD012817133
466510
Gammaproteobacteria
GCC
Gly
>WENV170600372
FUWD010122207
466510
Gammaproteobacteria
GCC
Gly
>WENV170598924
FUWD010054875
466510
Gammaproteobacteria
GCC
Gly
>WENV170597808
FUWD010015334
466510
Gammaproteobacteria
GCC
Gly
>WENV170597457
FUWD010001450
466510
Gammaproteobacteria
GCC
Gly
>WENV170597455
FUWD010001449
466510
Gammaproteobacteria
GCC
Gly
>WENV170633036
FUWD013390361
466510
Gammaproteobacteria
GCC
Gly
>WENV170632544
FUWD013384295
466510
Gammaproteobacteria
GCC
Gly
>WENV170632116
FUWD013378445
466510
Gammaproteobacteria
GCC
Gly
>WENV170632042
FUWD013377697
466510
Gammaproteobacteria
GCC
Gly
>WENV170615709
FUWD012865785
284508
Gammaproteobacteria
GTC
Asp
>WENV170632035
FUWD013377662
466186
Gammaproteobacteria
TGC
Ala
>WENV170623760
FUWD013170589
466186
Gammaproteobacteria
TGC
Ala
>WENV170614291
FUWD012829434
466186
Gammaproteobacteria
TGC
Ala
>WENV170622603
FUWD013112008
275485
Gammaproteobacteria
GTC
Asp
>WENV170622605
FUWD013112008
275485
Gammaproteobacteria
GTC
Asp
>WENV170630817
FUWD013325842
275485
Gammaproteobacteria
GTC
Asp
>WENV170630819
FUWD013325842
275485
Gammaproteobacteria
GTC
Asp
>WENV170608700
FUWD011053238
276372
Gammaproteobacteria
ACG
Arg
>WENV170631049
FUWD013336374
471158
Gammaproteobacteria
TTC
Glu
>WENV170622831
FUWD013122808
471158
Gammaproteobacteria
TTC
Glu
>WENV170605897
FUWD010562110
273328
Gammaproteobacteria
GAC
Val
>WENV170604061
FUWD010358021
454826
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK