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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
154 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170879558
MDTC01096990
275457
Gammaproteobacteria
ACG
Arg
>WENV170888952
MDTC01266919
275457
Gammaproteobacteria
ACG
Arg
>WENV170888953
MDTC01266919
275457
Gammaproteobacteria
ACG
Arg
>WENV170876312
MDTC01038001
779604
Gammaproteobacteria
GCA
Cys
>WENV170880782
MDTC01120121
779604
Gammaproteobacteria
GCA
Cys
>WENV170883255
MDTC01163059
457453
Gammaproteobacteria
TTT
Lys
>WENV170884999
MDTC01194140
454974
Gammaproteobacteria
TAC
Val
>WENV170882764
MDTC01153576
273863
Gammaproteobacteria
GGG
Pro
>WENV170877995
MDTC01068440
278579
Gammaproteobacteria
GTC
Asp
>WENV170877997
MDTC01068440
278579
Gammaproteobacteria
GTC
Asp
>WENV170878681
MDTC01081400
454971
Gammaproteobacteria
TTT
Lys
>WENV170887285
MDTC01237447
454971
Gammaproteobacteria
TTT
Lys
>WENV170887286
MDTC01237447
454971
Gammaproteobacteria
TTT
Lys
>WENV170874388
MDTC01003717
271464
Gammaproteobacteria
TGG
Pro
>WENV170875399
MDTC01020907
271464
Gammaproteobacteria
TGG
Pro
>WENV170889490
MDTC01275333
271464
Gammaproteobacteria
TGG
Pro
>WENV170884671
MDTC01187390
271393
Gammaproteobacteria
CAT
Met
>WENV170886120
MDTC01214895
274150
Gammaproteobacteria
CAT
Met
>WENV170886137
MDTC01215311
274150
Gammaproteobacteria
CAT
Met
>WENV170878296
MDTC01073554
284350
Gammaproteobacteria
TCT
Arg
>WENV170875830
MDTC01029540
453181
Gammaproteobacteria
GTG
His
>WENV170875256
MDTC01018486
456271
Gammaproteobacteria
GCC
Gly
>WENV170876912
MDTC01048756
456271
Gammaproteobacteria
GCC
Gly
>WENV170883965
MDTC01175971
474520
Gammaproteobacteria
CCA
Trp
>WENV170878167
MDTC01071158
474520
Gammaproteobacteria
CCA
Trp
>WENV170887352
MDTC01238542
270982
Gammaproteobacteria
GAT
Ile
>WENV170884686
MDTC01187711
270982
Gammaproteobacteria
GAT
Ile
>WENV170877284
MDTC01054806
270982
Gammaproteobacteria
GAT
Ile
>WENV170875585
MDTC01024252
456706
Gammaproteobacteria
TGT
Thr
>WENV170887114
MDTC01234040
276974
Gammaproteobacteria
GGG
Pro
>WENV170882900
MDTC01155812
276974
Gammaproteobacteria
GGG
Pro
>WENV170882777
MDTC01153814
276974
Gammaproteobacteria
GGG
Pro
>WENV170887659
MDTC01243575
502832
Gammaproteobacteria
GAA
Phe
>WENV170881811
MDTC01137748
275003
Gammaproteobacteria
CAT
Met
>WENV170878130
MDTC01070576
458351
Gammaproteobacteria
TTG
Gln
>WENV170874419
MDTC01004447
458351
Gammaproteobacteria
TTG
Gln
>WENV170882536
MDTC01150473
655198
Gammaproteobacteria
TTG
Gln
>WENV170882537
MDTC01150473
655198
Gammaproteobacteria
TTG
Gln
>WENV170880395
MDTC01112516
297860
Gammaproteobacteria
GAC
Val
>WENV170889528
MDTC01276141
30865
Gammaproteobacteria
GCT
Ser
>WENV170879465
MDTC01095741
180293
Gammaproteobacteria
TAG
Leu
>WENV170889529
MDTC01276141
276971
Gammaproteobacteria
ACG
Arg
>WENV170877643
MDTC01061795
276971
Gammaproteobacteria
ACG
Arg
>WENV170874800
MDTC01011342
451784
Gammaproteobacteria
GAA
Phe
>WENV170874802
MDTC01011342
451784
Gammaproteobacteria
GAA
Phe
>WENV170880050
MDTC01105455
451784
Gammaproteobacteria
GAA
Phe
>WENV170888334
MDTC01255963
451784
Gammaproteobacteria
GAA
Phe
>WENV170889414
MDTC01274432
451784
Gammaproteobacteria
GAA
Phe
>WENV170889228
MDTC01271638
457171
Gammaproteobacteria
GTT
Asn
>WENV170881005
MDTC01124094
457171
Gammaproteobacteria
GTT
Asn
>WENV170880492
MDTC01114691
457171
Gammaproteobacteria
GTT
Asn
>WENV170875888
MDTC01030458
457171
Gammaproteobacteria
GTT
Asn
>WENV170878936
MDTC01086392
274864
Gammaproteobacteria
ACG
Arg
>WENV170882295
MDTC01146754
274864
Gammaproteobacteria
ACG
Arg
>WENV170877086
MDTC01051778
278155
Gammaproteobacteria
TGG
Pro
>WENV170876134
MDTC01035220
278155
Gammaproteobacteria
TGG
Pro
>WENV170888781
MDTC01264116
271458
Gammaproteobacteria
GGG
Pro
>WENV170879958
MDTC01103632
452416
Gammaproteobacteria
TTT
Lys
>WENV170881236
MDTC01127672
273857
Gammaproteobacteria
TGG
Pro
>WENV170883699
MDTC01170772
279294
Gammaproteobacteria
GGG
Pro
>WENV170875547
MDTC01023603
780592
Gammaproteobacteria
CCC
Gly
>WENV170875130
MDTC01016535
464809
Gammaproteobacteria
GAA
Phe
>WENV170876648
MDTC01043969
454972
Gammaproteobacteria
GTG
His
>WENV170878583
MDTC01079397
276973
Gammaproteobacteria
GAC
Val
>WENV170874418
MDTC01004447
276973
Gammaproteobacteria
GAC
Val
>WENV170886360
MDTC01220152
780642
Gammaproteobacteria
GCA
Cys
>WENV170884780
MDTC01189497
112815
Gammaproteobacteria
CAG
Leu
>WENV170875302
MDTC01019245
32826
Gammaproteobacteria
TGA
Ser
>WENV170875296
MDTC01019202
452332
Gammaproteobacteria
GTG
His
>WENV170884582
MDTC01185815
452332
Gammaproteobacteria
GTG
His
>WENV170875543
MDTC01023567
271287
Gammaproteobacteria
CAT
Met
>WENV170882742
MDTC01153308
282413
Gammaproteobacteria
ACG
Arg
>WENV170882787
MDTC01153987
655197
Gammaproteobacteria
TTG
Gln
>WENV170884985
MDTC01193902
272104
Gammaproteobacteria
CGG
Pro
>WENV170880934
MDTC01122594
655196
Gammaproteobacteria
TCC
Gly
>WENV170875759
MDTC01028143
278982
Gammaproteobacteria
CCG
Arg
>WENV170881835
MDTC01138180
278982
Gammaproteobacteria
CCG
Arg
>WENV170877711
MDTC01063051
87214
Gammaproteobacteria
GGA
Ser
>WENV170877355
MDTC01056379
454814
Gammaproteobacteria
TAC
Val
>WENV170889404
MDTC01274345
452412
Gammaproteobacteria
GCC
Gly
>WENV170888841
MDTC01264947
452412
Gammaproteobacteria
GCC
Gly
>WENV170881396
MDTC01130344
452412
Gammaproteobacteria
GCC
Gly
>WENV170877629
MDTC01061532
275934
Gammaproteobacteria
GGG
Pro
>WENV170884934
MDTC01192984
780765
Gammaproteobacteria
CCC
Gly
>WENV170885899
MDTC01210871
271460
Gammaproteobacteria
CGG
Pro
>WENV170884914
MDTC01192382
456510
Gammaproteobacteria
GGC
Ala
>WENV170879249
MDTC01091665
452404
Gammaproteobacteria
TGT
Thr
>WENV170889194
MDTC01271089
180498
Gammaproteobacteria
TAG
Leu
>WENV170881237
MDTC01127672
273858
Gammaproteobacteria
TCT
Arg
>WENV170876053
MDTC01033961
275658
Gammaproteobacteria
TGG
Pro
>WENV170875599
MDTC01024715
301313
Gammaproteobacteria
TGG
Pro
>WENV170876137
MDTC01035220
274148
Gammaproteobacteria
GTC
Asp
>WENV170883869
MDTC01174299
273869
Gammaproteobacteria
GTT
Asn
>WENV170882753
MDTC01153463
271200
Gammaproteobacteria
CAT
Met
>WENV170878049
MDTC01069346
451643
Gammaproteobacteria
GAA
Phe
>WENV170875835
MDTC01029591
273754
Gammaproteobacteria
GTT
Asn
>WENV170879772
MDTC01100881
273754
Gammaproteobacteria
GTT
Asn
>WENV170883555
MDTC01167981
273754
Gammaproteobacteria
GTT
Asn
>WENV170875415
MDTC01021201
452377
Gammaproteobacteria
GTT
Asn
>WENV170876913
MDTC01048756
465222
Gammaproteobacteria
GCC
Gly
>WENV170888194
MDTC01252816
459731
Gammaproteobacteria
GGT
Thr
>WENV170887955
MDTC01248809
459731
Gammaproteobacteria
GGT
Thr
>WENV170877002
MDTC01050234
113485
Gammaproteobacteria
CAA
Leu
>WENV170884168
MDTC01179110
452881
Gammaproteobacteria
TGT
Thr
>WENV170879284
MDTC01092407
452881
Gammaproteobacteria
TGT
Thr
>WENV170888737
MDTC01262944
273121
Gammaproteobacteria
GAC
Val
>WENV170878339
MDTC01074267
274092
Gammaproteobacteria
GTC
Asp
>WENV170881925
MDTC01140078
271613
Gammaproteobacteria
GTC
Asp
>WENV170882291
MDTC01146663
271613
Gammaproteobacteria
GTC
Asp
>WENV170877397
MDTC01057207
273845
Gammaproteobacteria
GGG
Pro
>WENV170885945
MDTC01211641
112371
Gammaproteobacteria
CAA
Leu
>WENV170878809
MDTC01083794
452410
Gammaproteobacteria
TAC
Val
>WENV170874678
MDTC01009137
274865
Gammaproteobacteria
ACG
Arg
>WENV170888852
MDTC01265217
455974
Gammaproteobacteria
GTG
His
>WENV170883376
MDTC01165330
276972
Gammaproteobacteria
CCA
Trp
>WENV170882980
MDTC01157435
276972
Gammaproteobacteria
CCA
Trp
>WENV170880805
MDTC01120535
276972
Gammaproteobacteria
CCA
Trp
>WENV170878128
MDTC01070576
271286
Gammaproteobacteria
CAT
Met
>WENV170887686
MDTC01243955
457459
Gammaproteobacteria
GGC
Ala
>WENV170878129
MDTC01070576
181084
Gammaproteobacteria
TAG
Leu
>WENV170878131
MDTC01070576
181084
Gammaproteobacteria
TAG
Leu
>WENV170889491
MDTC01275333
302461
Gammaproteobacteria
TCT
Arg
>WENV170875829
MDTC01029540
291687
Gammaproteobacteria
TCT
Arg
>WENV170883124
MDTC01160235
454397
Gammaproteobacteria
TGT
Thr
>WENV170882675
MDTC01152189
454397
Gammaproteobacteria
TGT
Thr
>WENV170887952
MDTC01248809
454397
Gammaproteobacteria
TGT
Thr
>WENV170885161
MDTC01196835
454397
Gammaproteobacteria
TGT
Thr
>WENV170883808
MDTC01172879
454397
Gammaproteobacteria
TGT
Thr
>WENV170888053
MDTC01250084
112817
Gammaproteobacteria
TAA
Leu
>WENV170885619
MDTC01205755
454941
Gammaproteobacteria
GGT
Thr
>WENV170887227
MDTC01235982
452414
Gammaproteobacteria
TTC
Glu
>WENV170886959
MDTC01231190
466510
Gammaproteobacteria
GCC
Gly
>WENV170882834
MDTC01154822
466510
Gammaproteobacteria
GCC
Gly
>WENV170875828
MDTC01029540
276975
Gammaproteobacteria
TGG
Pro
>WENV170879461
MDTC01095653
276975
Gammaproteobacteria
TGG
Pro
>WENV170882968
MDTC01157293
30354
Gammaproteobacteria
TGA
Ser
>WENV170875965
MDTC01032201
455973
Gammaproteobacteria
TTT
Lys
>WENV170877588
MDTC01060868
455973
Gammaproteobacteria
TTT
Lys
>WENV170888885
MDTC01265755
455973
Gammaproteobacteria
TTT
Lys
>WENV170884961
MDTC01193478
454964
Gammaproteobacteria
TTC
Glu
>WENV170889019
MDTC01268049
276372
Gammaproteobacteria
ACG
Arg
>WENV170886637
MDTC01224732
276372
Gammaproteobacteria
ACG
Arg
>WENV170884927
MDTC01192826
276372
Gammaproteobacteria
ACG
Arg
>WENV170884911
MDTC01192319
276372
Gammaproteobacteria
ACG
Arg
>WENV170883144
MDTC01160699
276372
Gammaproteobacteria
ACG
Arg
>WENV170875266
MDTC01018743
30792
Gammaproteobacteria
GGA
Ser
>WENV170876042
MDTC01033886
273328
Gammaproteobacteria
GAC
Val
>WENV170877050
MDTC01051230
452407
Gammaproteobacteria
GAA
Phe
>WENV170884532
MDTC01184914
270699
Gammaproteobacteria
CAT
Met
>WENV170888221
MDTC01253645
274093
Gammaproteobacteria
GTC
Asp
>WENV170887597
MDTC01242592
274093
Gammaproteobacteria
GTC
Asp
>WENV170879469
MDTC01095769
274093
Gammaproteobacteria
GTC
Asp
>WENV170878034
MDTC01069065
274093
Gammaproteobacteria
GTC
Asp
>WENV170877070
MDTC01051543
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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