This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170009677
APMI01001636
238673
Bacteroidota
GAA
Phe
>WENV170011507
APMI01070476
238673
Bacteroidota
GAA
Phe
>WENV170011332
APMI01057085
146962
Bacteroidota
CAT
Met
>WENV170011619
APMI01077123
146962
Bacteroidota
CAT
Met
>WENV170012086
APMI01118754
340193
Bacteroidota
TTC
Glu
>WENV170012087
APMI01118754
340193
Bacteroidota
TTC
Glu
>WENV170010940
APMI01035594
412419
Bacteroidota
CCA
Trp
>WENV170012354
APMI01159742
145503
Bacteroidota
GTT
Asn
>WENV170009490
APMI01000411
340197
Bacteroidota
CCT
Arg
>WENV170009779
APMI01002882
61800
Bacteroidota
TAA
Leu
>WENV170009910
APMI01004840
61800
Bacteroidota
TAA
Leu
>WENV170009392
APMI01000157
147942
Bacteroidota
GTC
Asp
>WENV170009924
APMI01005206
147942
Bacteroidota
GTC
Asp
>WENV170010240
APMI01011318
147942
Bacteroidota
GTC
Asp
>WENV170011456
APMI01066849
147942
Bacteroidota
GTC
Asp
>WENV170011457
APMI01066849
147942
Bacteroidota
GTC
Asp
>WENV170011746
APMI01087448
146802
Bacteroidota
TGG
Pro
>WENV170011859
APMI01097311
146802
Bacteroidota
TGG
Pro
>WENV170011101
APMI01043373
238874
Bacteroidota
TTG
Gln
>WENV170012402
APMI01168627
348279
Bacteroidota
CAT
Met
>WENV170010159
APMI01009972
150845
Bacteroidota
GTC
Asp
>WENV170012022
APMI01112552
150845
Bacteroidota
GTC
Asp
>WENV170010532
APMI01019646
238872
Bacteroidota
TTT
Lys
>WENV170010039
APMI01007377
412440
Bacteroidota
GCA
Cys
>WENV170011348
APMI01059035
412440
Bacteroidota
GCA
Cys
>WENV170009832
APMI01003664
343560
Bacteroidota
TCG
Arg
>WENV170010025
APMI01006948
343560
Bacteroidota
TCG
Arg
>WENV170010026
APMI01006949
343560
Bacteroidota
TCG
Arg
>WENV170010863
APMI01032072
416051
Bacteroidota
CCA
Trp
>WENV170010864
APMI01032074
416051
Bacteroidota
CCA
Trp
>WENV170010045
APMI01007416
81682
Bacteroidota
GTA
Tyr
>WENV170009465
APMI01000372
25279
Bacteroidota
GGA
Ser
>WENV170009714
APMI01002118
127221
Bacteroidota
TAC
Val
>WENV170010328
APMI01013913
127221
Bacteroidota
TAC
Val
>WENV170010329
APMI01013913
127221
Bacteroidota
TAC
Val
>WENV170010393
APMI01015708
127221
Bacteroidota
TAC
Val
>WENV170010394
APMI01015708
127221
Bacteroidota
TAC
Val
>WENV170010611
APMI01022453
127221
Bacteroidota
TAC
Val
>WENV170010612
APMI01022453
127221
Bacteroidota
TAC
Val
>WENV170009452
APMI01000355
151405
Bacteroidota
TGC
Ala
>WENV170009862
APMI01004204
81039
Bacteroidota
GAG
Leu
>WENV170009680
APMI01001657
146800
Bacteroidota
>WENV170012248
APMI01142027
146800
Bacteroidota
>WENV170010834
APMI01030622
340152
Bacteroidota
GGT
Thr
>WENV170010832
APMI01030622
113760
Bacteroidota
GTA
Tyr
>WENV170010661
APMI01024383
119530
Bacteroidota
CAA
Leu
>WENV170011157
APMI01046468
119530
Bacteroidota
CAA
Leu
>WENV170011960
APMI01106552
60483
Bacteroidota
>WENV170009861
APMI01004204
238671
Bacteroidota
TTT
Lys
>WENV170009863
APMI01004204
238671
Bacteroidota
TTT
Lys
>WENV170010752
APMI01027654
238671
Bacteroidota
TTT
Lys
>WENV170010754
APMI01027654
238671
Bacteroidota
TTT
Lys
>WENV170009504
APMI01000464
46755
Bacteroidota
GCT
Ser
>WENV170009844
APMI01003841
413661
Bacteroidota
GCA
Cys
>WENV170009913
APMI01004895
413661
Bacteroidota
GCA
Cys
>WENV170011323
APMI01055975
81622
Bacteroidota
GTA
Tyr
>WENV170009871
APMI01004377
340605
Bacteroidota
TTC
Glu
>WENV170010271
APMI01012152
340605
Bacteroidota
TTC
Glu
>WENV170010549
APMI01020157
342824
Bacteroidota
GGT
Thr
>WENV170010089
APMI01008258
412441
Bacteroidota
TTG
Gln
>WENV170011346
APMI01058966
412441
Bacteroidota
TTG
Gln
>WENV170011753
APMI01087798
412441
Bacteroidota
TTG
Gln
>WENV170012203
APMI01135372
145159
Bacteroidota
CGG
Pro
>WENV170009909
APMI01004840
238670
Bacteroidota
GCC
Gly
>WENV170011559
APMI01074207
238670
Bacteroidota
GCC
Gly
>WENV170009506
APMI01000464
147944
Bacteroidota
TCT
Arg
>WENV170010723
APMI01026177
147944
Bacteroidota
TCT
Arg
>WENV170011526
APMI01072182
147944
Bacteroidota
TCT
Arg
>WENV170011679
APMI01081683
147944
Bacteroidota
TCT
Arg
>WENV170009279
APMI01000018
148318
Bacteroidota
GTT
Asn
>WENV170009768
APMI01002733
148318
Bacteroidota
GTT
Asn
>WENV170010446
APMI01017301
148318
Bacteroidota
GTT
Asn
>WENV170010573
APMI01021065
148318
Bacteroidota
GTT
Asn
>WENV170011520
APMI01071791
148318
Bacteroidota
GTT
Asn
>WENV170011745
APMI01087448
25256
Bacteroidota
GCT
Ser
>WENV170012325
APMI01154123
412518
Bacteroidota
GCA
Cys
>WENV170010889
APMI01033496
238756
Bacteroidota
CAT
Met
>WENV170010046
APMI01007416
236055
Bacteroidota
TCC
Gly
>WENV170010833
APMI01030622
236055
Bacteroidota
TCC
Gly
>WENV170011324
APMI01055975
251069
Bacteroidota
TCC
Gly
>WENV170010093
APMI01008311
251411
Bacteroidota
GAA
Phe
>WENV170011395
APMI01062834
251411
Bacteroidota
GAA
Phe
>WENV170010548
APMI01020144
236699
Bacteroidota
TTG
Gln
>WENV170011955
APMI01106552
159472
Bacteroidota
TCT
Arg
>WENV170010063
APMI01007674
412494
Bacteroidota
CCA
Trp
>WENV170010916
APMI01035055
412494
Bacteroidota
CCA
Trp
>WENV170011184
APMI01048253
412494
Bacteroidota
CCA
Trp
>WENV170009628
APMI01001021
147940
Bacteroidota
GTG
His
>WENV170010392
APMI01015701
147940
Bacteroidota
GTG
His
>WENV170011762
APMI01089367
147940
Bacteroidota
GTG
His
>WENV170009629
APMI01001021
147945
Bacteroidota
CAT
Met
>WENV170010173
APMI01010166
147945
Bacteroidota
CAT
Met
>WENV170011565
APMI01074565
153768
Bacteroidota
TGC
Ala
>WENV170009893
APMI01004590
159335
Bacteroidota
GTT
Asn
>WENV170012204
APMI01135545
159335
Bacteroidota
GTT
Asn
>WENV170010721
APMI01026177
45935
Bacteroidota
GCT
Ser
>WENV170010047
APMI01007416
343032
Bacteroidota
GGT
Thr
>WENV170011246
APMI01052061
159417
Bacteroidota
CAT
Met
>WENV170011417
APMI01064524
159417
Bacteroidota
CAT
Met
>WENV170012120
APMI01121944
159417
Bacteroidota
CAT
Met
>WENV170010722
APMI01026177
128249
Bacteroidota
TGG
Pro
>WENV170011525
APMI01072182
128249
Bacteroidota
TGG
Pro
>WENV170010753
APMI01027654
82649
Bacteroidota
GAG
Leu
>WENV170009777
APMI01002882
96124
Bacteroidota
TAG
Leu
>WENV170009908
APMI01004840
96124
Bacteroidota
TAG
Leu
>WENV170011558
APMI01074207
96124
Bacteroidota
TAG
Leu
>WENV170009778
APMI01002882
240620
Bacteroidota
GCC
Gly
>WENV170009897
APMI01004625
238672
Bacteroidota
CAT
Met
>WENV170012085
APMI01118754
238672
Bacteroidota
CAT
Met
>WENV170009870
APMI01004377
340028
Bacteroidota
TTC
Glu
>WENV170010270
APMI01012152
340028
Bacteroidota
TTC
Glu
>WENV170011782
APMI01090250
97112
Bacteroidota
CAA
Leu
>WENV170010290
APMI01012761
45130
Bacteroidota
TGA
Ser
>WENV170010044
APMI01007416
147941
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK