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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170554218
CXWK01054361
149985
Alphaproteobacteria
ACG
Arg
>WENV170552579
CXWK01000469
159476
Alphaproteobacteria
ACG
Arg
>WENV170552855
CXWK01002792
96061
Alphaproteobacteria
CAA
Leu
>WENV170555062
CXWK01094587
67726
Alphaproteobacteria
CAG
Leu
>WENV170553135
CXWK01008805
98812
Alphaproteobacteria
CAG
Leu
>WENV170554714
CXWK01086932
159426
Alphaproteobacteria
CAT
Met
>WENV170553605
CXWK01025107
342732
Alphaproteobacteria
CCC
Gly
>WENV170554223
CXWK01054639
342732
Alphaproteobacteria
CCC
Gly
>WENV170553127
CXWK01008712
155663
Alphaproteobacteria
CCG
Arg
>WENV170554417
CXWK01068264
259072
Alphaproteobacteria
CGC
Ala
>WENV170553382
CXWK01016596
237281
Alphaproteobacteria
CGT
Thr
>WENV170553946
CXWK01038962
237281
Alphaproteobacteria
CGT
Thr
>WENV170553491
CXWK01020740
435239
Alphaproteobacteria
CTG
Gln
>WENV170553900
CXWK01036979
248021
Alphaproteobacteria
CTT
Lys
>WENV170552874
CXWK01003101
253273
Alphaproteobacteria
CTT
Lys
>WENV170552790
CXWK01002048
256414
Alphaproteobacteria
CTT
Lys
>WENV170553793
CXWK01031322
240120
Alphaproteobacteria
CTT
Lys
>WENV170552708
CXWK01001172
345452
Alphaproteobacteria
GAC
Val
>WENV170553606
CXWK01025226
345452
Alphaproteobacteria
GAC
Val
>WENV170553289
CXWK01013554
342876
Alphaproteobacteria
GAC
Val
>WENV170553138
CXWK01008817
5143
Alphaproteobacteria
GCT
Ser
>WENV170552798
CXWK01002097
345454
Alphaproteobacteria
GGT
Thr
>WENV170553155
CXWK01009287
352191
Alphaproteobacteria
GGT
Thr
>WENV170553597
CXWK01024639
99414
Alphaproteobacteria
GTA
Tyr
>WENV170553027
CXWK01005847
146852
Alphaproteobacteria
GTC
Asp
>WENV170554457
CXWK01071299
146852
Alphaproteobacteria
GTC
Asp
>WENV170553113
CXWK01008024
152034
Alphaproteobacteria
GTC
Asp
>WENV170553120
CXWK01008356
159404
Alphaproteobacteria
GTG
His
>WENV170552925
CXWK01003970
185456
Alphaproteobacteria
GTG
His
>WENV170554270
CXWK01058101
339149
Alphaproteobacteria
GTT
Asn
>WENV170553312
CXWK01014403
345492
Alphaproteobacteria
TAC
Val
>WENV170553112
CXWK01008024
279830
Alphaproteobacteria
TAC
Val
>WENV170553904
CXWK01037222
95923
Alphaproteobacteria
TAG
Leu
>WENV170553114
CXWK01008154
147213
Alphaproteobacteria
TCT
Arg
>WENV170554020
CXWK01042840
316120
Alphaproteobacteria
TGC
Ala
>WENV170555218
CXWK01098851
163397
Alphaproteobacteria
TGG
Pro
>WENV170553264
CXWK01012896
256971
Alphaproteobacteria
TGT
Thr
>WENV170553461
CXWK01019149
351461
Alphaproteobacteria
TTG
Gln
>WENV170553613
CXWK01025532
156543
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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