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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170654952
JTFN01000055
144934
Betaproteobacteria
TTG
Gln
>WENV170654959
JTFN01000255
95723
Betaproteobacteria
CAG
Leu
>WENV170654985
JTFN01001123
339575
Betaproteobacteria
CAC
Val
>WENV170655020
JTFN01002163
237682
Betaproteobacteria
CGT
Thr
>WENV170655021
JTFN01002239
237682
Betaproteobacteria
CGT
Thr
>WENV170655045
JTFN01002686
237683
Betaproteobacteria
CTT
Lys
>WENV170655047
JTFN01002742
147017
Betaproteobacteria
GAT
Ile
>WENV170655055
JTFN01003142
6969
Betaproteobacteria
GCT
Ser
>WENV170655087
JTFN01004539
339576
Betaproteobacteria
CCT
Arg
>WENV170655116
JTFN01005683
17915
Betaproteobacteria
GGA
Ser
>WENV170655133
JTFN01007028
237684
Betaproteobacteria
TGT
Thr
>WENV170655139
JTFN01007389
412213
Betaproteobacteria
CCC
Gly
>WENV170655220
JTFN01012286
109389
Betaproteobacteria
TAG
Leu
>WENV170655235
JTFN01013681
147018
Betaproteobacteria
TCT
Arg
>WENV170655238
JTFN01013767
109389
Betaproteobacteria
TAG
Leu
>WENV170655258
JTFN01015440
23642
Betaproteobacteria
TGA
Ser
>WENV170655259
JTFN01015440
80881
Betaproteobacteria
TAA
Leu
>WENV170655272
JTFN01016597
237682
Betaproteobacteria
CGT
Thr
>WENV170655295
JTFN01018721
147018
Betaproteobacteria
TCT
Arg
>WENV170655318
JTFN01020484
109389
Betaproteobacteria
TAG
Leu
>WENV170655350
JTFN01023630
412212
Betaproteobacteria
GCA
Cys
>WENV170655354
JTFN01024449
339575
Betaproteobacteria
CAC
Val
>WENV170655362
JTFN01025389
339574
Betaproteobacteria
CCG
Arg
>WENV170655419
JTFN01030640
412212
Betaproteobacteria
GCA
Cys
>WENV170655420
JTFN01030641
412212
Betaproteobacteria
GCA
Cys
>WENV170655467
JTFN01035101
193916
Betaproteobacteria
TTG
Gln
>WENV170655469
JTFN01035531
99533
Betaproteobacteria
CAG
Leu
>WENV170655493
JTFN01038317
23642
Betaproteobacteria
TGA
Ser
>WENV170655494
JTFN01038317
80881
Betaproteobacteria
TAA
Leu
>WENV170655506
JTFN01039558
339576
Betaproteobacteria
CCT
Arg
>WENV170655521
JTFN01041094
99533
Betaproteobacteria
CAG
Leu
>WENV170655529
JTFN01041949
237682
Betaproteobacteria
CGT
Thr
>WENV170655553
JTFN01044465
59151
Betaproteobacteria
GTA
Tyr
>WENV170655583
JTFN01048262
6969
Betaproteobacteria
GCT
Ser
>WENV170655598
JTFN01049901
147017
Betaproteobacteria
GAT
Ile
>WENV170655644
JTFN01054307
17915
Betaproteobacteria
GGA
Ser
>WENV170655663
JTFN01055764
267870
Betaproteobacteria
TTC
Glu
>WENV170655727
JTFN01063872
412212
Betaproteobacteria
GCA
Cys
>WENV170655776
JTFN01072400
412213
Betaproteobacteria
CCC
Gly
>WENV170655783
JTFN01073368
99533
Betaproteobacteria
CAG
Leu
>WENV170655814
JTFN01078926
339574
Betaproteobacteria
CCG
Arg
>WENV170655849
JTFN01083607
237683
Betaproteobacteria
CTT
Lys
>WENV170655850
JTFN01083765
99533
Betaproteobacteria
CAG
Leu
>WENV170655869
JTFN01088981
193916
Betaproteobacteria
TTG
Gln
>WENV170655937
JTFN01098408
267870
Betaproteobacteria
TTC
Glu
>WENV170655940
JTFN01098408
267870
Betaproteobacteria
TTC
Glu
>WENV170655964
JTFN01104004
339574
Betaproteobacteria
CCG
Arg
>WENV170655972
JTFN01105154
267870
Betaproteobacteria
TTC
Glu
>WENV170656005
JTFN01114620
253278
Betaproteobacteria
TTT
Lys
>WENV170656104
JTFN01135111
339574
Betaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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