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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704782
LLEN01000016
144917
Gammaproteobacteria
>WENV170704832
LLEN01002047
144917
Gammaproteobacteria
>WENV170704905
LLEN01012124
338303
Gammaproteobacteria
>WENV170704929
LLEN01017283
338303
Gammaproteobacteria
>WENV170704809
LLEN01000228
58757
Gammaproteobacteria
>WENV170704852
LLEN01003846
193276
Gammaproteobacteria
ACG
Arg
>WENV170704866
LLEN01005327
203054
Gammaproteobacteria
ACG
Arg
>WENV170704889
LLEN01009538
203054
Gammaproteobacteria
ACG
Arg
>WENV170704932
LLEN01018399
59175
Gammaproteobacteria
CAG
Leu
>WENV170704853
LLEN01004193
149066
Gammaproteobacteria
CAT
Met
>WENV170704800
LLEN01000110
195299
Gammaproteobacteria
CAT
Met
>WENV170704913
LLEN01013940
195299
Gammaproteobacteria
CAT
Met
>WENV170704828
LLEN01001433
146642
Gammaproteobacteria
CCA
Trp
>WENV170704795
LLEN01000076
235453
Gammaproteobacteria
GAA
Phe
>WENV170704831
LLEN01001976
235453
Gammaproteobacteria
GAA
Phe
>WENV170704935
LLEN01018519
235453
Gammaproteobacteria
GAA
Phe
>WENV170704784
LLEN01000020
96958
Gammaproteobacteria
GAG
Leu
>WENV170704922
LLEN01015598
147026
Gammaproteobacteria
GAT
Ile
>WENV170704819
LLEN01000607
193275
Gammaproteobacteria
GAT
Ile
>WENV170704864
LLEN01004953
411651
Gammaproteobacteria
GCA
Cys
>WENV170704909
LLEN01013613
412230
Gammaproteobacteria
GCA
Cys
>WENV170704792
LLEN01000033
432040
Gammaproteobacteria
GCA
Cys
>WENV170704793
LLEN01000033
432040
Gammaproteobacteria
GCA
Cys
>WENV170704807
LLEN01000228
432040
Gammaproteobacteria
GCA
Cys
>WENV170704827
LLEN01001298
432040
Gammaproteobacteria
GCA
Cys
>WENV170704908
LLEN01013613
237225
Gammaproteobacteria
GCC
Gly
>WENV170704808
LLEN01000228
277971
Gammaproteobacteria
GCC
Gly
>WENV170704851
LLEN01003846
10780
Gammaproteobacteria
GCT
Ser
>WENV170704813
LLEN01000533
10563
Gammaproteobacteria
GCT
Ser
>WENV170704890
LLEN01009538
10563
Gammaproteobacteria
GCT
Ser
>WENV170704791
LLEN01000030
56673
Gammaproteobacteria
GGA
Ser
>WENV170704801
LLEN01000119
56673
Gammaproteobacteria
GGA
Ser
>WENV170704857
LLEN01004610
24067
Gammaproteobacteria
GGA
Ser
>WENV170704778
LLEN01000008
237221
Gammaproteobacteria
GGC
Ala
>WENV170704875
LLEN01007671
146644
Gammaproteobacteria
GGG
Pro
>WENV170704799
LLEN01000109
243323
Gammaproteobacteria
GGT
Thr
>WENV170704906
LLEN01012464
240084
Gammaproteobacteria
GGT
Thr
>WENV170704802
LLEN01000128
95866
Gammaproteobacteria
GTA
Tyr
>WENV170704844
LLEN01003241
145000
Gammaproteobacteria
GTC
Asp
>WENV170704787
LLEN01000024
235450
Gammaproteobacteria
GTG
His
>WENV170704789
LLEN01000024
235450
Gammaproteobacteria
GTG
His
>WENV170704824
LLEN01001017
311624
Gammaproteobacteria
GTG
His
>WENV170704796
LLEN01000076
267224
Gammaproteobacteria
GTT
Asn
>WENV170704917
LLEN01014133
237220
Gammaproteobacteria
GTT
Asn
>WENV170704843
LLEN01003241
319098
Gammaproteobacteria
TAC
Val
>WENV170704896
LLEN01010617
96362
Gammaproteobacteria
TAG
Leu
>WENV170704904
LLEN01012124
96362
Gammaproteobacteria
TAG
Leu
>WENV170704810
LLEN01000250
152303
Gammaproteobacteria
TCT
Arg
>WENV170704894
LLEN01010423
182279
Gammaproteobacteria
TCT
Arg
>WENV170704833
LLEN01002502
19282
Gammaproteobacteria
TGA
Ser
>WENV170704873
LLEN01007071
312287
Gammaproteobacteria
TGT
Thr
>WENV170704897
LLEN01010617
401784
Gammaproteobacteria
TTG
Gln
>WENV170704941
LLEN01019822
267573
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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