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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170844775
MDTA01012015
147089
Alphaproteobacteria
ACG
Arg
>WENV170850960
MDTA01123837
147089
Alphaproteobacteria
ACG
Arg
>WENV170850944
MDTA01123495
28073
Alphaproteobacteria
GCT
Ser
>WENV170855560
MDTA01208183
66752
Alphaproteobacteria
CAG
Leu
>WENV170848540
MDTA01080959
113700
Alphaproteobacteria
>WENV170845211
MDTA01019860
375044
Alphaproteobacteria
GCC
Gly
>WENV170846613
MDTA01045603
375044
Alphaproteobacteria
GCC
Gly
>WENV170848141
MDTA01073614
375044
Alphaproteobacteria
GCC
Gly
>WENV170854622
MDTA01191745
375044
Alphaproteobacteria
GCC
Gly
>WENV170846345
MDTA01040854
23468
Alphaproteobacteria
GCT
Ser
>WENV170849544
MDTA01097753
23468
Alphaproteobacteria
GCT
Ser
>WENV170849774
MDTA01102142
238045
Alphaproteobacteria
TTC
Glu
>WENV170844225
MDTA01002160
105430
Alphaproteobacteria
TAG
Leu
>WENV170844686
MDTA01010692
257573
Alphaproteobacteria
GAA
Phe
>WENV170850192
MDTA01110136
257573
Alphaproteobacteria
GAA
Phe
>WENV170855116
MDTA01200833
184120
Alphaproteobacteria
GTG
His
>WENV170850614
MDTA01117343
176908
Alphaproteobacteria
GTC
Asp
>WENV170845181
MDTA01019305
282595
Alphaproteobacteria
CCA
Trp
>WENV170856514
MDTA01225031
190043
Alphaproteobacteria
CAT
Met
>WENV170854837
MDTA01195662
338282
Alphaproteobacteria
GTT
Asn
>WENV170852880
MDTA01158956
95916
Alphaproteobacteria
TAG
Leu
>WENV170849739
MDTA01101466
243897
Alphaproteobacteria
TGC
Ala
>WENV170851373
MDTA01131112
339846
Alphaproteobacteria
GAC
Val
>WENV170848840
MDTA01085835
339454
Alphaproteobacteria
>WENV170854434
MDTA01188500
339454
Alphaproteobacteria
>WENV170852345
MDTA01148695
237740
Alphaproteobacteria
TTT
Lys
>WENV170844858
MDTA01013267
281594
Alphaproteobacteria
TGT
Thr
>WENV170848550
MDTA01081115
281594
Alphaproteobacteria
TGT
Thr
>WENV170850739
MDTA01119616
281594
Alphaproteobacteria
TGT
Thr
>WENV170854771
MDTA01194819
281594
Alphaproteobacteria
TGT
Thr
>WENV170856752
MDTA01229250
281594
Alphaproteobacteria
TGT
Thr
>WENV170845063
MDTA01017565
175748
Alphaproteobacteria
CAT
Met
>WENV170854788
MDTA01195036
194755
Alphaproteobacteria
CAT
Met
>WENV170846507
MDTA01043546
96640
Alphaproteobacteria
CAA
Leu
>WENV170852701
MDTA01155572
339750
Alphaproteobacteria
GGT
Thr
>WENV170851063
MDTA01125642
192195
Alphaproteobacteria
GTC
Asp
>WENV170852855
MDTA01158474
192195
Alphaproteobacteria
GTC
Asp
>WENV170853335
MDTA01167656
192195
Alphaproteobacteria
GTC
Asp
>WENV170854548
MDTA01190272
192195
Alphaproteobacteria
GTC
Asp
>WENV170855873
MDTA01214181
192195
Alphaproteobacteria
GTC
Asp
>WENV170856583
MDTA01226075
192195
Alphaproteobacteria
GTC
Asp
>WENV170856101
MDTA01217650
341307
Alphaproteobacteria
GTT
Asn
>WENV170851163
MDTA01126988
258175
Alphaproteobacteria
CGC
Ala
>WENV170855946
MDTA01215322
258175
Alphaproteobacteria
CGC
Ala
>WENV170847000
MDTA01052403
167926
Alphaproteobacteria
CAT
Met
>WENV170848505
MDTA01080309
368915
Alphaproteobacteria
GGT
Thr
>WENV170850350
MDTA01112656
254522
Alphaproteobacteria
GAA
Phe
>WENV170850401
MDTA01113404
254522
Alphaproteobacteria
GAA
Phe
>WENV170845998
MDTA01034498
289655
Alphaproteobacteria
GGC
Ala
>WENV170848719
MDTA01083766
289655
Alphaproteobacteria
GGC
Ala
>WENV170856102
MDTA01217650
426273
Alphaproteobacteria
GCA
Cys
>WENV170852804
MDTA01157563
266073
Alphaproteobacteria
TTT
Lys
>WENV170853879
MDTA01178305
266073
Alphaproteobacteria
TTT
Lys
>WENV170855095
MDTA01200452
235430
Alphaproteobacteria
TTT
Lys
>WENV170845888
MDTA01032440
152248
Alphaproteobacteria
TGG
Pro
>WENV170851264
MDTA01128886
152248
Alphaproteobacteria
TGG
Pro
>WENV170854796
MDTA01195135
29831
Alphaproteobacteria
TGA
Ser
>WENV170855957
MDTA01215582
412424
Alphaproteobacteria
TCC
Gly
>WENV170846294
MDTA01039911
147289
Alphaproteobacteria
GTC
Asp
>WENV170847919
MDTA01070248
185456
Alphaproteobacteria
GTG
His
>WENV170852854
MDTA01158474
289664
Alphaproteobacteria
TAC
Val
>WENV170853334
MDTA01167656
289664
Alphaproteobacteria
TAC
Val
>WENV170845104
MDTA01017926
185506
Alphaproteobacteria
CAT
Met
>WENV170847493
MDTA01061947
243633
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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