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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170897488
MDTD01112286
256453
Thermodesulfobacteriota
TGC
Ala
>WENV170898658
MDTD01129431
12283
Thermodesulfobacteriota
TGA
Ser
>WENV170898265
MDTD01123300
256456
Thermodesulfobacteriota
CAT
Met
>WENV170901923
MDTD01177896
83353
Thermodesulfobacteriota
GTA
Tyr
>WENV170900851
MDTD01160475
154121
Thermodesulfobacteriota
GTC
Asp
>WENV170898395
MDTD01125283
165016
Thermodesulfobacteriota
CGG
Pro
>WENV170891261
MDTD01021398
269764
Thermodesulfobacteriota
GGC
Ala
>WENV170892865
MDTD01043965
269764
Thermodesulfobacteriota
GGC
Ala
>WENV170895353
MDTD01078053
256451
Thermodesulfobacteriota
CTT
Lys
>WENV170890270
MDTD01007429
64858
Thermodesulfobacteriota
CAG
Leu
>WENV170900612
MDTD01156811
64858
Thermodesulfobacteriota
CAG
Leu
>WENV170894295
MDTD01063471
351789
Thermodesulfobacteriota
GAC
Val
>WENV170895352
MDTD01078053
256448
Thermodesulfobacteriota
GTT
Asn
>WENV170901925
MDTD01177896
174404
Thermodesulfobacteriota
CCA
Trp
>WENV170897628
MDTD01114798
99359
Thermodesulfobacteriota
TAG
Leu
>WENV170896360
MDTD01094401
194956
Thermodesulfobacteriota
GGG
Pro
>WENV170896167
MDTD01091182
256452
Thermodesulfobacteriota
CTC
Glu
>WENV170896329
MDTD01093894
62195
Thermodesulfobacteriota
GAG
Leu
>WENV170896330
MDTD01093894
62195
Thermodesulfobacteriota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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