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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183674169
ORJL011357186
283660
Betaproteobacteria
TTC
Glu
>WENV183678504
ORJL011885639
239252
Betaproteobacteria
TTT
Lys
>WENV183666297
ORJL010539054
266853
Betaproteobacteria
GTG
His
>WENV183666938
ORJL010598183
145694
Betaproteobacteria
ACG
Arg
>WENV183673340
ORJL011266546
145694
Betaproteobacteria
ACG
Arg
>WENV183678003
ORJL011824419
145694
Betaproteobacteria
ACG
Arg
>WENV183661092
ORJL010080388
154789
Betaproteobacteria
CAT
Met
>WENV183661416
ORJL010106962
251517
Betaproteobacteria
TGT
Thr
>WENV183677935
ORJL011815117
296710
Betaproteobacteria
TTC
Glu
>WENV183675115
ORJL011473833
236112
Betaproteobacteria
GAA
Phe
>WENV183675272
ORJL011489605
236112
Betaproteobacteria
GAA
Phe
>WENV183676109
ORJL011588386
236112
Betaproteobacteria
GAA
Phe
>WENV183663476
ORJL010287928
307571
Betaproteobacteria
CGC
Ala
>WENV183667699
ORJL010674311
251462
Betaproteobacteria
GCC
Gly
>WENV183676813
ORJL011671685
251462
Betaproteobacteria
GCC
Gly
>WENV183677948
ORJL011816282
251462
Betaproteobacteria
GCC
Gly
>WENV183674588
ORJL011407129
85133
Betaproteobacteria
GTA
Tyr
>WENV183676824
ORJL011672984
339995
Betaproteobacteria
CAC
Val
>WENV183666417
ORJL010548866
95951
Betaproteobacteria
CAA
Leu
>WENV183666880
ORJL010593269
372150
Betaproteobacteria
CAC
Val
>WENV183676515
ORJL011634165
372150
Betaproteobacteria
CAC
Val
>WENV183677167
ORJL011719116
372150
Betaproteobacteria
CAC
Val
>WENV183660250
ORJL010008845
316959
Betaproteobacteria
CTT
Lys
>WENV183671782
ORJL011100725
316959
Betaproteobacteria
CTT
Lys
>WENV183674411
ORJL011385285
316959
Betaproteobacteria
CTT
Lys
>WENV183676093
ORJL011587399
316959
Betaproteobacteria
CTT
Lys
>WENV183678139
ORJL011841194
316959
Betaproteobacteria
CTT
Lys
>WENV183678817
ORJL011925885
316959
Betaproteobacteria
CTT
Lys
>WENV183678858
ORJL011933355
316959
Betaproteobacteria
CTT
Lys
>WENV183661798
ORJL010137405
19888
Betaproteobacteria
GGA
Ser
>WENV183676636
ORJL011649783
199861
Betaproteobacteria
CAT
Met
>WENV183662970
ORJL010242575
96247
Betaproteobacteria
GAG
Leu
>WENV183663369
ORJL010277595
96247
Betaproteobacteria
GAG
Leu
>WENV183664573
ORJL010390480
96247
Betaproteobacteria
GAG
Leu
>WENV183673079
ORJL011238719
96247
Betaproteobacteria
GAG
Leu
>WENV183674274
ORJL011369221
96247
Betaproteobacteria
GAG
Leu
>WENV183674278
ORJL011369346
96247
Betaproteobacteria
GAG
Leu
>WENV183676850
ORJL011676442
96247
Betaproteobacteria
GAG
Leu
>WENV183677751
ORJL011795597
96247
Betaproteobacteria
GAG
Leu
>WENV183662949
ORJL010240533
292518
Betaproteobacteria
TTT
Lys
>WENV183663132
ORJL010256676
292518
Betaproteobacteria
TTT
Lys
>WENV183664582
ORJL010390939
292518
Betaproteobacteria
TTT
Lys
>WENV183668848
ORJL010779874
292518
Betaproteobacteria
TTT
Lys
>WENV183673667
ORJL011304493
292518
Betaproteobacteria
TTT
Lys
>WENV183674657
ORJL011416071
292518
Betaproteobacteria
TTT
Lys
>WENV183674734
ORJL011426250
292518
Betaproteobacteria
TTT
Lys
>WENV183674756
ORJL011428439
292518
Betaproteobacteria
TTT
Lys
>WENV183677594
ORJL011775041
292518
Betaproteobacteria
TTT
Lys
>WENV183678057
ORJL011832753
292518
Betaproteobacteria
TTT
Lys
>WENV183678434
ORJL011879037
292518
Betaproteobacteria
TTT
Lys
>WENV183661867
ORJL010142322
236106
Betaproteobacteria
CAT
Met
>WENV183665331
ORJL010458624
236106
Betaproteobacteria
CAT
Met
>WENV183673804
ORJL011320150
236106
Betaproteobacteria
CAT
Met
>WENV183675633
ORJL011532285
236106
Betaproteobacteria
CAT
Met
>WENV183676424
ORJL011622607
153173
Betaproteobacteria
CAT
Met
>WENV183672782
ORJL011208206
147331
Betaproteobacteria
CAT
Met
>WENV183662316
ORJL010180318
162621
Betaproteobacteria
TTG
Gln
>WENV183666892
ORJL010593862
162621
Betaproteobacteria
TTG
Gln
>WENV183667742
ORJL010677619
155790
Betaproteobacteria
CAT
Met
>WENV183667746
ORJL010677810
155790
Betaproteobacteria
CAT
Met
>WENV183668472
ORJL010743208
155790
Betaproteobacteria
CAT
Met
>WENV183668785
ORJL010772832
155790
Betaproteobacteria
CAT
Met
>WENV183673803
ORJL011320103
155790
Betaproteobacteria
CAT
Met
>WENV183675540
ORJL011521546
246006
Betaproteobacteria
TTT
Lys
>WENV183663038
ORJL010248840
45127
Betaproteobacteria
CGA
Ser
>WENV183670481
ORJL010949752
162620
Betaproteobacteria
ACG
Arg
>WENV183671261
ORJL011040291
162620
Betaproteobacteria
ACG
Arg
>WENV183671729
ORJL011092630
162620
Betaproteobacteria
ACG
Arg
>WENV183672622
ORJL011192847
162620
Betaproteobacteria
ACG
Arg
>WENV183675338
ORJL011497940
162620
Betaproteobacteria
ACG
Arg
>WENV183665442
ORJL010463536
144934
Betaproteobacteria
TTG
Gln
>WENV183671095
ORJL011026447
238002
Betaproteobacteria
GCC
Gly
>WENV183671096
ORJL011026447
238002
Betaproteobacteria
GCC
Gly
>WENV183678596
ORJL011898552
105933
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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