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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745292
PJUL01016746
151925
Alphaproteobacteria
CGG
Pro
>WENV183745237
PJUL01008177
266516
Alphaproteobacteria
TAC
Val
>WENV183745111
PJUL01002467
339149
Alphaproteobacteria
GTT
Asn
>WENV183745159
PJUL01003547
339360
Alphaproteobacteria
>WENV183744804
PJUL01000274
96238
Alphaproteobacteria
GAG
Leu
>WENV183745112
PJUL01002489
96238
Alphaproteobacteria
GAG
Leu
>WENV183745321
PJUL01024141
23394
Alphaproteobacteria
CGA
Ser
>WENV183745193
PJUL01005116
99726
Alphaproteobacteria
TAG
Leu
>WENV183745233
PJUL01007973
146864
Alphaproteobacteria
TGG
Pro
>WENV183744806
PJUL01000274
267922
Alphaproteobacteria
CCA
Trp
>WENV183745123
PJUL01002679
267922
Alphaproteobacteria
CCA
Trp
>WENV183745297
PJUL01018932
146903
Alphaproteobacteria
CCT
Arg
>WENV183745208
PJUL01006010
159426
Alphaproteobacteria
CAT
Met
>WENV183745337
PJUL01027523
127451
Alphaproteobacteria
GGG
Pro
>WENV183745083
PJUL01002078
146858
Alphaproteobacteria
TCT
Arg
>WENV183745213
PJUL01006269
146858
Alphaproteobacteria
TCT
Arg
>WENV183745085
PJUL01002116
340310
Alphaproteobacteria
CAC
Val
>WENV183745291
PJUL01016613
339454
Alphaproteobacteria
>WENV183745350
PJUL01033154
339454
Alphaproteobacteria
>WENV183744809
PJUL01000278
339457
Alphaproteobacteria
>WENV183745161
PJUL01003647
146854
Alphaproteobacteria
CCT
Arg
>WENV183745152
PJUL01003379
339495
Alphaproteobacteria
>WENV183745283
PJUL01015337
95924
Alphaproteobacteria
GAG
Leu
>WENV183745086
PJUL01002146
97145
Alphaproteobacteria
TAG
Leu
>WENV183745192
PJUL01005005
97145
Alphaproteobacteria
TAG
Leu
>WENV183745055
PJUL01001722
23554
Alphaproteobacteria
TGA
Ser
>WENV183744958
PJUL01000926
338274
Alphaproteobacteria
TAC
Val
>WENV183745022
PJUL01001390
338274
Alphaproteobacteria
TAC
Val
>WENV183744774
PJUL01000209
237281
Alphaproteobacteria
CGT
Thr
>WENV183745008
PJUL01001296
237281
Alphaproteobacteria
CGT
Thr
>WENV183745119
PJUL01002596
148854
Alphaproteobacteria
GTC
Asp
>WENV183745124
PJUL01002718
148854
Alphaproteobacteria
GTC
Asp
>WENV183745315
PJUL01023289
166801
Alphaproteobacteria
TCG
Arg
>WENV183745141
PJUL01003031
339465
Alphaproteobacteria
GGT
Thr
>WENV183745204
PJUL01005787
237479
Alphaproteobacteria
TTT
Lys
>WENV183745351
PJUL01033241
237479
Alphaproteobacteria
TTT
Lys
>WENV183745240
PJUL01008272
95936
Alphaproteobacteria
TAA
Leu
>WENV183745163
PJUL01003764
23611
Alphaproteobacteria
CGA
Ser
>WENV183745247
PJUL01008645
23611
Alphaproteobacteria
CGA
Ser
>WENV183744908
PJUL01000600
187569
Alphaproteobacteria
CCG
Arg
>WENV183745234
PJUL01007980
412153
Alphaproteobacteria
CTG
Gln
>WENV183745095
PJUL01002244
60995
Alphaproteobacteria
TAA
Leu
>WENV183745182
PJUL01004562
339464
Alphaproteobacteria
GCC
Gly
>WENV183745281
PJUL01015024
144969
Alphaproteobacteria
CGG
Pro
>WENV183744903
PJUL01000579
428521
Alphaproteobacteria
CTG
Gln
>WENV183745076
PJUL01001990
428521
Alphaproteobacteria
CTG
Gln
>WENV183745010
PJUL01001307
345469
Alphaproteobacteria
TGT
Thr
>WENV183744979
PJUL01001030
101826
Alphaproteobacteria
TAG
Leu
>WENV183745044
PJUL01001590
237579
Alphaproteobacteria
CTT
Lys
>WENV183745118
PJUL01002581
237579
Alphaproteobacteria
CTT
Lys
>WENV183744682
PJUL01000063
147013
Alphaproteobacteria
TCT
Arg
>WENV183744817
PJUL01000287
147013
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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