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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170010044
APMI01007416
179467
Bacteroidota
TGT
Thr
>WENV170009657
APMI01001299
298432
Bacteroidota
TCC
Gly
>WENV170010222
APMI01010940
298432
Bacteroidota
TCC
Gly
>WENV170009893
APMI01004590
192166
Bacteroidota
GTT
Asn
>WENV170012204
APMI01135545
192166
Bacteroidota
GTT
Asn
>WENV170012243
APMI01140963
155765
Bacteroidota
TAC
Val
>WENV170010290
APMI01012761
57204
Bacteroidota
TGA
Ser
>WENV170010089
APMI01008258
481286
Bacteroidota
TTG
Gln
>WENV170011346
APMI01058966
481286
Bacteroidota
TTG
Gln
>WENV170011753
APMI01087798
481286
Bacteroidota
TTG
Gln
>WENV170010834
APMI01030622
400985
Bacteroidota
GGT
Thr
>WENV170010047
APMI01007416
404097
Bacteroidota
GGT
Thr
>WENV170011246
APMI01052061
192263
Bacteroidota
CAT
Met
>WENV170011417
APMI01064524
192263
Bacteroidota
CAT
Met
>WENV170012120
APMI01121944
192263
Bacteroidota
CAT
Met
>WENV170009862
APMI01004204
100325
Bacteroidota
GAG
Leu
>WENV170011746
APMI01087448
178181
Bacteroidota
TGG
Pro
>WENV170011859
APMI01097311
178181
Bacteroidota
TGG
Pro
>WENV170012316
APMI01152593
284518
Bacteroidota
CAT
Met
>WENV170009648
APMI01001185
179819
Bacteroidota
CAT
Met
>WENV170011332
APMI01057085
179819
Bacteroidota
CAT
Met
>WENV170009844
APMI01003841
482597
Bacteroidota
GCA
Cys
>WENV170009913
APMI01004895
482597
Bacteroidota
GCA
Cys
>WENV170012282
APMI01146074
178210
Bacteroidota
CGG
Pro
>WENV170011672
APMI01080902
178210
Bacteroidota
CGG
Pro
>WENV170009662
APMI01001359
178210
Bacteroidota
CGG
Pro
>WENV170009477
APMI01000386
178210
Bacteroidota
CGG
Pro
>WENV170012354
APMI01159742
192365
Bacteroidota
GTT
Asn
>WENV170010046
APMI01007416
281463
Bacteroidota
TCC
Gly
>WENV170011395
APMI01062834
292874
Bacteroidota
GAA
Phe
>WENV170010093
APMI01008311
292874
Bacteroidota
GAA
Phe
>WENV170009677
APMI01001636
292874
Bacteroidota
GAA
Phe
>WENV170011761
APMI01089128
30778
Bacteroidota
GGA
Ser
>WENV170011498
APMI01069640
30778
Bacteroidota
GGA
Ser
>WENV170010172
APMI01010163
30778
Bacteroidota
GGA
Ser
>WENV170010063
APMI01007674
481345
Bacteroidota
CCA
Trp
>WENV170010916
APMI01035055
481345
Bacteroidota
CCA
Trp
>WENV170011184
APMI01048253
481345
Bacteroidota
CCA
Trp
>WENV170009628
APMI01001021
179466
Bacteroidota
GTG
His
>WENV170010392
APMI01015701
179466
Bacteroidota
GTG
His
>WENV170011762
APMI01089367
179466
Bacteroidota
GTG
His
>WENV170009359
APMI01000104
58240
Bacteroidota
TGA
Ser
>WENV170011322
APMI01055975
282908
Bacteroidota
TGT
Thr
>WENV170011323
APMI01055975
100972
Bacteroidota
GTA
Tyr
>WENV170011904
APMI01100840
298625
Bacteroidota
CAT
Met
>WENV170010573
APMI01021065
179905
Bacteroidota
GTT
Asn
>WENV170010446
APMI01017301
179905
Bacteroidota
GTT
Asn
>WENV170009768
APMI01002733
179905
Bacteroidota
GTT
Asn
>WENV170009279
APMI01000018
179905
Bacteroidota
GTT
Asn
>WENV170010661
APMI01024383
147852
Bacteroidota
CAA
Leu
>WENV170011157
APMI01046468
147852
Bacteroidota
CAA
Leu
>WENV170009871
APMI01004377
401479
Bacteroidota
TTC
Glu
>WENV170010271
APMI01012152
401479
Bacteroidota
TTC
Glu
>WENV170009392
APMI01000157
179468
Bacteroidota
GTC
Asp
>WENV170009924
APMI01005206
179468
Bacteroidota
GTC
Asp
>WENV170010240
APMI01011318
179468
Bacteroidota
GTC
Asp
>WENV170011456
APMI01066849
179468
Bacteroidota
GTC
Asp
>WENV170011457
APMI01066849
179468
Bacteroidota
GTC
Asp
>WENV170009321
APMI01000072
179914
Bacteroidota
GGG
Pro
>WENV170009414
APMI01000190
179914
Bacteroidota
GGG
Pro
>WENV170010832
APMI01030622
140945
Bacteroidota
GTA
Tyr
>WENV170012203
APMI01135372
176435
Bacteroidota
CGG
Pro
>WENV170009832
APMI01003664
404657
Bacteroidota
TCG
Arg
>WENV170010025
APMI01006948
404657
Bacteroidota
TCG
Arg
>WENV170010026
APMI01006949
404657
Bacteroidota
TCG
Arg
>WENV170010753
APMI01027654
102155
Bacteroidota
GAG
Leu
>WENV170010833
APMI01030622
293273
Bacteroidota
TCC
Gly
>WENV170009680
APMI01001657
178179
Bacteroidota
GGC
Ala
>WENV170010173
APMI01010166
179471
Bacteroidota
CAT
Met
>WENV170009629
APMI01001021
179471
Bacteroidota
CAT
Met
>WENV170010549
APMI01020157
403862
Bacteroidota
GGT
Thr
>WENV170011101
APMI01043373
284522
Bacteroidota
TTG
Gln
>WENV170009870
APMI01004377
400849
Bacteroidota
TTC
Glu
>WENV170010270
APMI01012152
400849
Bacteroidota
TTC
Glu
>WENV170009897
APMI01004625
284314
Bacteroidota
CAT
Met
>WENV170012085
APMI01118754
284314
Bacteroidota
CAT
Met
>WENV170010889
APMI01033496
281460
Bacteroidota
CAT
Met
>WENV170010045
APMI01007416
101043
Bacteroidota
GTA
Tyr
>WENV170009861
APMI01004204
284313
Bacteroidota
TTT
Lys
>WENV170009863
APMI01004204
284313
Bacteroidota
TTT
Lys
>WENV170010752
APMI01027654
284313
Bacteroidota
TTT
Lys
>WENV170010754
APMI01027654
284313
Bacteroidota
TTT
Lys
>WENV170011558
APMI01074207
119316
Bacteroidota
TAG
Leu
>WENV170011960
APMI01106552
74999
Bacteroidota
>WENV170010062
APMI01007662
56551
Bacteroidota
>WENV170010795
APMI01029225
56551
Bacteroidota
>WENV170011725
APMI01085545
56551
Bacteroidota
>WENV170011507
APMI01070476
284315
Bacteroidota
GAA
Phe
>WENV170009909
APMI01004840
281210
Bacteroidota
GCC
Gly
>WENV170011559
APMI01074207
281210
Bacteroidota
GCC
Gly
>WENV170009910
APMI01004840
75644
Bacteroidota
TAA
Leu
>WENV170010039
APMI01007377
481285
Bacteroidota
GCA
Cys
>WENV170011348
APMI01059035
481285
Bacteroidota
GCA
Cys
>WENV170012144
APMI01126200
118464
Bacteroidota
TAG
Leu
>WENV170010721
APMI01026177
57300
Bacteroidota
GCT
Ser
>WENV170010532
APMI01019646
284520
Bacteroidota
TTT
Lys
>WENV170010785
APMI01028920
399343
Bacteroidota
TTC
Glu
>WENV170009506
APMI01000464
179470
Bacteroidota
TCT
Arg
>WENV170010723
APMI01026177
179470
Bacteroidota
TCT
Arg
>WENV170011526
APMI01072182
179470
Bacteroidota
TCT
Arg
>WENV170011679
APMI01081683
179470
Bacteroidota
TCT
Arg
>WENV170009777
APMI01002882
118400
Bacteroidota
TAG
Leu
>WENV170009908
APMI01004840
118400
Bacteroidota
TAG
Leu
>WENV170009714
APMI01002118
156347
Bacteroidota
TAC
Val
>WENV170010328
APMI01013913
156347
Bacteroidota
TAC
Val
>WENV170010329
APMI01013913
156347
Bacteroidota
TAC
Val
>WENV170010393
APMI01015708
156347
Bacteroidota
TAC
Val
>WENV170010394
APMI01015708
156347
Bacteroidota
TAC
Val
>WENV170010611
APMI01022453
156347
Bacteroidota
TAC
Val
>WENV170010612
APMI01022453
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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