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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170552329
CXWJ01056110
360947
Alphaproteobacteria
TTT
Lys
>WENV170551264
CXWJ01002564
413566
Alphaproteobacteria
TTG
Gln
>WENV170551782
CXWJ01022922
293747
Alphaproteobacteria
CTT
Lys
>WENV170551604
CXWJ01014602
281452
Alphaproteobacteria
CGT
Thr
>WENV170552030
CXWJ01035268
176225
Alphaproteobacteria
TGG
Pro
>WENV170551387
CXWJ01006314
400258
Alphaproteobacteria
>WENV170551700
CXWJ01018178
100383
Alphaproteobacteria
GTA
Tyr
>WENV170551573
CXWJ01012961
282966
Alphaproteobacteria
TTT
Lys
>WENV170551602
CXWJ01014543
118147
Alphaproteobacteria
CAA
Leu
>WENV170552177
CXWJ01042905
192328
Alphaproteobacteria
ACG
Arg
>WENV170551380
CXWJ01006034
509917
Alphaproteobacteria
TCC
Gly
>WENV170551618
CXWJ01015395
376770
Alphaproteobacteria
CGC
Ala
>WENV170552088
CXWJ01038120
157150
Alphaproteobacteria
GGG
Pro
>WENV170552292
CXWJ01053365
29611
Alphaproteobacteria
CGA
Ser
>WENV170552343
CXWJ01057122
176153
Alphaproteobacteria
CAT
Met
>WENV170551709
CXWJ01018680
29653
Alphaproteobacteria
TGA
Ser
>WENV170551473
CXWJ01008917
178315
Alphaproteobacteria
CAT
Met
>WENV170551417
CXWJ01006977
400250
Alphaproteobacteria
GAC
Val
>WENV170551537
CXWJ01011514
400250
Alphaproteobacteria
GAC
Val
>WENV170552269
CXWJ01051469
400069
Alphaproteobacteria
CAC
Val
>WENV170552273
CXWJ01051710
231082
Alphaproteobacteria
ACG
Arg
>WENV170551391
CXWJ01006387
398980
Alphaproteobacteria
GAC
Val
>WENV170551653
CXWJ01016124
229804
Alphaproteobacteria
GTC
Asp
>WENV170552369
CXWJ01058842
179419
Alphaproteobacteria
TGG
Pro
>WENV170551946
CXWJ01031222
122480
Alphaproteobacteria
CAG
Leu
>WENV170552403
CXWJ01062387
458954
Alphaproteobacteria
GGT
Thr
>WENV170552117
CXWJ01040009
413432
Alphaproteobacteria
GGT
Thr
>WENV170551775
CXWJ01022638
404054
Alphaproteobacteria
CAC
Val
>WENV170551095
CXWJ01000117
118145
Alphaproteobacteria
TAG
Leu
>WENV170551224
CXWJ01001615
398996
Alphaproteobacteria
GCC
Gly
>WENV170551246
CXWJ01002081
366782
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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