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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180026621
FTIU01005820
283940
Betaproteobacteria
TTC
Glu
>WENV180026635
FTIU01007073
178122
Betaproteobacteria
TGG
Pro
>WENV180026501
FTIU01000292
480930
Betaproteobacteria
CCC
Gly
>WENV180026654
FTIU01010985
225748
Betaproteobacteria
TCT
Arg
>WENV180026519
FTIU01001052
330401
Betaproteobacteria
GCC
Gly
>WENV180026707
FTIU01033320
178141
Betaproteobacteria
CAT
Met
>WENV180026685
FTIU01022301
282862
Betaproteobacteria
TGC
Ala
>WENV180026741
FTIU01067306
282862
Betaproteobacteria
TGC
Ala
>WENV180026641
FTIU01008340
73416
Betaproteobacteria
TAG
Leu
>WENV180026504
FTIU01000389
284770
Betaproteobacteria
CTT
Lys
>WENV180026646
FTIU01009552
284770
Betaproteobacteria
CTT
Lys
>WENV180026558
FTIU01002631
400162
Betaproteobacteria
GGT
Thr
>WENV180026503
FTIU01000384
118123
Betaproteobacteria
CAG
Leu
>WENV180026527
FTIU01001320
118123
Betaproteobacteria
CAG
Leu
>WENV180026665
FTIU01014362
118123
Betaproteobacteria
CAG
Leu
>WENV180026653
FTIU01010715
281681
Betaproteobacteria
TTT
Lys
>WENV180026740
FTIU01067306
176778
Betaproteobacteria
GAT
Ile
>WENV180026716
FTIU01038733
20518
Betaproteobacteria
GGA
Ser
>WENV180026557
FTIU01002631
499230
Betaproteobacteria
TCC
Gly
>WENV180026556
FTIU01002580
282860
Betaproteobacteria
CCA
Trp
>WENV180026543
FTIU01001958
350355
Betaproteobacteria
TTC
Glu
>WENV180026703
FTIU01029133
350355
Betaproteobacteria
TTC
Glu
>WENV180026493
FTIU01000124
225043
Betaproteobacteria
ACG
Arg
>WENV180026512
FTIU01000801
225043
Betaproteobacteria
ACG
Arg
>WENV180026874
FTIU01605807
225043
Betaproteobacteria
ACG
Arg
>WENV180026839
FTIU01274563
480929
Betaproteobacteria
GCA
Cys
>WENV180026852
FTIU01298647
178499
Betaproteobacteria
TTG
Gln
>WENV180026499
FTIU01000210
399347
Betaproteobacteria
CAC
Val
>WENV180026538
FTIU01001836
5917
Betaproteobacteria
GCT
Ser
>WENV180026550
FTIU01002197
235235
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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