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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181171214
OEIV010171056
190929
Actinomycetota
GTC
Asp
>WENV181171721
OEIV010324963
31652
Actinomycetota
CGA
Ser
>WENV181173298
OEIV011359341
285571
Actinomycetota
GGC
Ala
>WENV181172897
OEIV011050381
293206
Actinomycetota
GGT
Thr
>WENV181171785
OEIV010354177
195667
Actinomycetota
GAT
Ile
>WENV181169459
OEIV010002645
481201
Actinomycetota
GCA
Cys
>WENV181169000
OEIV010000100
316564
Actinomycetota
GGT
Thr
>WENV181171498
OEIV010250638
491020
Actinomycetota
GCA
Cys
>WENV181172679
OEIV010913193
283025
Actinomycetota
CCT
Arg
>WENV181172268
OEIV010572285
281115
Actinomycetota
>WENV181172437
OEIV010695979
298505
Actinomycetota
CTC
Glu
>WENV181169880
OEIV010013472
177976
Actinomycetota
CAA
Leu
>WENV181169899
OEIV010014162
283927
Actinomycetota
CGT
Thr
>WENV181170813
OEIV010092700
434525
Actinomycetota
CTG
Gln
>WENV181173414
OEIV011459239
315976
Actinomycetota
GCC
Gly
>WENV181170569
OEIV010059516
281146
Actinomycetota
CGC
Ala
>WENV181171843
OEIV010377680
281633
Actinomycetota
CCA
Trp
>WENV181173017
OEIV011135932
481050
Actinomycetota
CCC
Gly
>WENV181171819
OEIV010368540
436761
Actinomycetota
CTG
Gln
>WENV181169544
OEIV010003925
403867
Actinomycetota
CTG
Gln
>WENV181170009
OEIV010019401
496545
Actinomycetota
CCC
Gly
>WENV181170759
OEIV010084044
46827
Actinomycetota
GAG
Leu
>WENV181170056
OEIV010021705
179106
Actinomycetota
GAT
Ile
>WENV181169887
OEIV010013749
232121
Actinomycetota
TGG
Pro
>WENV181170895
OEIV010108362
281008
Actinomycetota
GCC
Gly
>WENV181169914
OEIV010014626
118332
Actinomycetota
TAG
Leu
>WENV181173015
OEIV011135697
315859
Actinomycetota
GTT
Asn
>WENV181170024
OEIV010020077
281098
Actinomycetota
ACG
Arg
>WENV181171217
OEIV010173407
175961
Actinomycetota
TCT
Arg
>WENV181169796
OEIV010010329
283930
Actinomycetota
TTT
Lys
>WENV181172110
OEIV010492509
423412
Actinomycetota
GAC
Val
>WENV181172017
OEIV010446605
292678
Actinomycetota
CTT
Lys
>WENV181170023
OEIV010020077
15911
Actinomycetota
GCT
Ser
>WENV181169520
OEIV010003413
343270
Actinomycetota
GGC
Ala
>WENV181169981
OEIV010018255
283933
Actinomycetota
TAC
Val
>WENV181170818
OEIV010093755
293804
Actinomycetota
GCC
Gly
>WENV181170057
OEIV010021705
289535
Actinomycetota
TGC
Ala
>WENV181170035
OEIV010020746
281005
Actinomycetota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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