tRNA genes clustered and arranged according to each identical group

Line Islands Corals, viral fraction from water of Palmyra (SRP000141)

Anticodon = TCT

HIT: 12 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.271858 (25 seq.)
>ENV08000310 ABLZ01103316 viral fraction from Sargasso Sea 13 89 + Arg TCT [ENA]
>ENV08000314 ABLZ01113454 viral fraction from Sargasso Sea 13 89 + Arg TCT [ENA]
>ENV08000324 ABLZ01159886 viral fraction from Sargasso Sea 16 92 + Arg TCT [ENA]
>ENV08000904 ABML01095218 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 19 95 + Arg TCT [ENA]
>WENV170148731 CEOA01022976 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 995 919 - Arg TCT [ENA]
>WENV170211889 CEPW01118843 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 252 176 - Arg TCT [ENA]
>WENV170340995 CETC01061747 [CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2513 2437 - Arg TCT [ENA]
>WENV170365237 CETN01039649 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 240 164 - Arg TCT [ENA]
>WENV170386793 CETY01196720 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1265 1189 - Arg TCT [ENA]
>WENV170409228 CEUJ01012438 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 416 492 + Arg TCT [ENA]
>WENV170423940 CEUO01046840 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1002 926 - Arg TCT [ENA]
>WENV170458185 CEVB01044958 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 234 158 - Arg TCT [ENA]
>WENV170460206 CEVC01126662 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 564 640 + Arg TCT [ENA]
>WENV170512782 CEVZ01231982 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 503 427 - Arg TCT [ENA]
>WENV170594138 FUFK011193814 [FUFK] metagenome; unknown 503 427 - Arg TCT [ENA]
>WENV170730796 LULH01004864 [LULH] marine metagenome; Red Sea water column Station 169 - depth 100m 2493 2417 - Arg TCT [ENA]
>WENV170752163 LUMI01043890 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 274 350 + Arg TCT [ENA]
>WENV170757904 LUMQ01016764 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 487 563 + Arg TCT [ENA]
>WENV170837925 MDSZ01158272 [MDSZ] marine metagenome; seawater 1586 1662 + Arg TCT [ENA]
>WENV170842386 MDSZ01239384 [MDSZ] marine metagenome; seawater 461 537 + Arg TCT [ENA]
>SRA1000271 SRR001038.131482 Marine Viruses from Sargasso Sea (SRP000130) 13 89 + Arg TCT [SRA]
>SRA1000279 SRR001038.236415 Marine Viruses from Sargasso Sea (SRP000130) 13 89 + Arg TCT [SRA]
>SRA1000281 SRR001038.250246 Marine Viruses from Sargasso Sea (SRP000130) 16 92 + Arg TCT [SRA]
>SRA1000907 SRR001049.83448 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 19 95 + Arg TCT [SRA]
>SRA1000911 SRR001049.109296 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 19 95 + Arg TCT [SRA]
Identical group No.295694 (4 seq.)
>ENV08000927 ABML01247900 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 80 4 - Arg TCT [ENA]
>WENV170269028 CERH01026476 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 818 742 - Arg TCT [ENA]
>WENV170345703 CETF01057078 [CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 19 95 + Arg TCT [ENA]
>SRA1000934 SRR001049.205268 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 80 4 - Arg TCT [SRA]
Identical group No.409041 (3 seq.)
>ENV08000905 ABML01096354 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 37 112 + Arg TCT [ENA]
>SRA1000930 SRR001049.190970 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 37 112 + Arg TCT [SRA]
>SRA1000933 SRR001049.197647 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 37 112 + Arg TCT [SRA]
Identical group No.409042 (2 seq.)
>ENV08000906 ABML01104266 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 11 85 + Arg TCT [ENA]
>SRA1000908 SRR001049.89844 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 11 85 + Arg TCT [SRA]
Identical group No.409043 (3 seq.)
>ENV08000910 ABML01136124 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 21 97 + Arg TCT [ENA]
>WENV171003949 NTLX01000032 [NTLX] marine metagenome; viruses from ocean water 11246 11322 + Arg TCT [ENA]
>SRA1000929 SRR001049.186473 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 21 97 + Arg TCT [SRA]
Identical group No.409044 (2 seq.)
>ENV08000924 ABML01182629 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 84 8 - Arg TCT [ENA]
>SRA1000941 SRR001049.240407 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 84 8 - Arg TCT [SRA]
Identical group No.409045 (2 seq.)
>ENV08000928 ABML01248663 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 7 83 + Arg TCT [ENA]
>SRA1000894 SRR001049.3745 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 7 83 + Arg TCT [SRA]
Identical group No.479945 (19 seq.)
>ENV08000912 ABML01147598 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 82 7 - Arg TCT [ENA]
>WENV170137991 CENW01074785 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 509 434 - Arg TCT [ENA]
>WENV170180490 CEOW01100539 [CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 950 1025 + Arg TCT [ENA]
>WENV170221563 CEQB01039904 [CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1093 1168 + Arg TCT [ENA]
>WENV170312456 CESM01260378 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 76 1 - Arg TCT [ENA]
>WENV170382099 CETW01357597 [CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 116 41 - Arg TCT [ENA]
>WENV170409833 CEUJ01052815 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4251 4176 - Arg TCT [ENA]
>WENV170414223 CEUK01181273 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 718 643 - Arg TCT [ENA]
>WENV170439429 CEUV01032380 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 184 109 - Arg TCT [ENA]
>WENV170459250 CEVC01038587 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 12155 12080 - Arg TCT [ENA]
>WENV170497152 CEVS01146007 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 77 152 + Arg TCT [ENA]
>WENV170578705 FUFK010025724 [FUFK] metagenome; unknown 90 165 + Arg TCT [ENA]
>WENV170583857 FUFK010168731 [FUFK] metagenome; unknown 166 91 - Arg TCT [ENA]
>WENV170586201 FUFK010376353 [FUFK] metagenome; unknown 1223 1298 + Arg TCT [ENA]
>WENV170589476 FUFK010644941 [FUFK] metagenome; unknown 720 795 + Arg TCT [ENA]
>WENV170869873 MDTB01183292 [MDTB] marine metagenome; seawater 2556 2631 + Arg TCT [ENA]
>WENV170902728 MDTD01190235 [MDTD] marine metagenome; seawater 227 152 - Arg TCT [ENA]
>WENV170927451 MDTG01117320 [MDTG] marine metagenome; seawater 2631 2706 + Arg TCT [ENA]
>SRA1000931 SRR001049.195898 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 82 7 - Arg TCT [SRA]
Identical group No.604924 (2 seq.)
>ENV08000891 ABML01037159 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 33 107 + Arg TCT [ENA]
>SRA1000904 SRR001049.69538 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 33 107 + Arg TCT [SRA]
Identical group No.683141 (3 seq.)
>ENV08000892 ABML01038095 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 120 46 - Arg TCT [ENA]
>WENV170436512 CEUT01061202 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4486 4412 - Arg TCT [ENA]
>SRA1000900 SRR001049.47385 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 120 46 - Arg TCT [SRA]
Identical group No.694383 (6 seq.)
>ENV08000917 ABML01160035 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 98 25 - Arg TCT [ENA]
>WENV170193940 CEPI01075458 [CEPI] marine metagenome genome assembly TARA_041_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 554 481 - Arg TCT [ENA]
>WENV170207844 CEPU01128481 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3826 3899 + Arg TCT [ENA]
>WENV170792370 MDSV01098564 [MDSV] marine metagenome; seawater 1141 1068 - Arg TCT [ENA]
>WENV170842734 MDSZ01246534 [MDSZ] marine metagenome; seawater 1726 1653 - Arg TCT [ENA]
>SRA1000922 SRR001049.150494 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 98 25 - Arg TCT [SRA]
Identical group No.746086 (2 seq.)
>ENV08000921 ABML01167656 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 14 88 + Arg TCT [ENA]
>SRA1000916 SRR001049.134012 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 14 88 + Arg TCT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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