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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183664766
ORJL010406921
152464
Actinomycetota
CAT
Met
>WENV183672098
ORJL011135648
152464
Actinomycetota
CAT
Met
>WENV183670073
ORJL010905182
4635
Actinomycetota
GCT
Ser
>WENV183660948
ORJL010070646
113907
Actinomycetota
GTA
Tyr
>WENV183660640
ORJL010041305
237630
Actinomycetota
CCA
Trp
>WENV183665628
ORJL010478234
237630
Actinomycetota
CCA
Trp
>WENV183676960
ORJL011690762
237630
Actinomycetota
CCA
Trp
>WENV183677364
ORJL011747917
237630
Actinomycetota
CCA
Trp
>WENV183671068
ORJL011022786
237359
Actinomycetota
CGC
Ala
>WENV183662365
ORJL010184722
28406
Actinomycetota
CGA
Ser
>WENV183662889
ORJL010235419
28406
Actinomycetota
CGA
Ser
>WENV183669255
ORJL010822481
28406
Actinomycetota
CGA
Ser
>WENV183673407
ORJL011273757
28406
Actinomycetota
CGA
Ser
>WENV183675950
ORJL011572589
28406
Actinomycetota
CGA
Ser
>WENV183666410
ORJL010548685
390230
Actinomycetota
CCG
Arg
>WENV183675359
ORJL011500556
262283
Actinomycetota
CTT
Lys
>WENV183660766
ORJL010051253
262283
Actinomycetota
CTT
Lys
>WENV183674228
ORJL011363630
243547
Actinomycetota
TTC
Glu
>WENV183670392
ORJL010940675
243547
Actinomycetota
TTC
Glu
>WENV183669579
ORJL010856686
243547
Actinomycetota
TTC
Glu
>WENV183670541
ORJL010955840
146607
Actinomycetota
GTC
Asp
>WENV183669311
ORJL010828394
37306
Actinomycetota
GAG
Leu
>WENV183676590
ORJL011644958
411681
Actinomycetota
GCA
Cys
>WENV183673215
ORJL011256398
386061
Actinomycetota
CTG
Gln
>WENV183670698
ORJL010974246
386061
Actinomycetota
CTG
Gln
>WENV183661600
ORJL010121847
386061
Actinomycetota
CTG
Gln
>WENV183661540
ORJL010116858
386061
Actinomycetota
CTG
Gln
>WENV183676507
ORJL011632737
147843
Actinomycetota
GAC
Val
>WENV183665879
ORJL010500101
339374
Actinomycetota
CTG
Gln
>WENV183660949
ORJL010070646
305589
Actinomycetota
GGT
Thr
>WENV183669580
ORJL010856686
149270
Actinomycetota
GTC
Asp
>WENV183678835
ORJL011930023
237513
Actinomycetota
ACG
Arg
>WENV183675685
ORJL011538291
338139
Actinomycetota
GTT
Asn
>WENV183675183
ORJL011482904
412577
Actinomycetota
GCA
Cys
>WENV183664283
ORJL010361992
412577
Actinomycetota
GCA
Cys
>WENV183666212
ORJL010529527
419087
Actinomycetota
TCC
Gly
>WENV183673070
ORJL011238011
237305
Actinomycetota
TTC
Glu
>WENV183674538
ORJL011400305
95600
Actinomycetota
CAA
Leu
>WENV183667664
ORJL010670916
267445
Actinomycetota
GGT
Thr
>WENV183669906
ORJL010890501
145130
Actinomycetota
CAA
Leu
>WENV183676671
ORJL011653344
68142
Actinomycetota
GAG
Leu
>WENV183670631
ORJL010965430
68142
Actinomycetota
GAG
Leu
>WENV183661430
ORJL010107869
237357
Actinomycetota
GTT
Asn
>WENV183665880
ORJL010500101
235225
Actinomycetota
CTC
Glu
>WENV183671596
ORJL011078433
251343
Actinomycetota
CGC
Ala
>WENV183668867
ORJL010781410
251343
Actinomycetota
CGC
Ala
>WENV183674213
ORJL011361813
236221
Actinomycetota
GTT
Asn
>WENV183662624
ORJL010211818
236221
Actinomycetota
GTT
Asn
>WENV183671688
ORJL011089203
438019
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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