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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183698997
OZSS01009098
113700
Alphaproteobacteria
>WENV183699915
OZSS01065825
113700
Alphaproteobacteria
>WENV183698189
OZSS01000077
339454
Alphaproteobacteria
>WENV183698608
OZSS01002266
339606
Alphaproteobacteria
>WENV183699765
OZSS01049962
149985
Alphaproteobacteria
ACG
Arg
>WENV183699771
OZSS01050637
149985
Alphaproteobacteria
ACG
Arg
>WENV183699400
OZSS01024562
82948
Alphaproteobacteria
CAA
Leu
>WENV183698381
OZSS01000754
167926
Alphaproteobacteria
CAT
Met
>WENV183699695
OZSS01044487
167926
Alphaproteobacteria
CAT
Met
>WENV183698139
OZSS01000003
267922
Alphaproteobacteria
CCA
Trp
>WENV183699818
OZSS01055500
282595
Alphaproteobacteria
CCA
Trp
>WENV183699756
OZSS01049491
241518
Alphaproteobacteria
CCA
Trp
>WENV183698229
OZSS01000148
241518
Alphaproteobacteria
CCA
Trp
>WENV183699496
OZSS01028852
185767
Alphaproteobacteria
CCG
Arg
>WENV183699327
OZSS01021281
257573
Alphaproteobacteria
GAA
Phe
>WENV183700201
OZSS01127386
254522
Alphaproteobacteria
GAA
Phe
>WENV183698852
OZSS01005751
254522
Alphaproteobacteria
GAA
Phe
>WENV183699846
OZSS01058536
348781
Alphaproteobacteria
GAA
Phe
>WENV183698593
OZSS01002153
348781
Alphaproteobacteria
GAA
Phe
>WENV183698933
OZSS01007464
345376
Alphaproteobacteria
GAC
Val
>WENV183698339
OZSS01000554
342876
Alphaproteobacteria
GAC
Val
>WENV183699843
OZSS01057820
359842
Alphaproteobacteria
GAC
Val
>WENV183699270
OZSS01018561
359842
Alphaproteobacteria
GAC
Val
>WENV183698601
OZSS01002186
359842
Alphaproteobacteria
GAC
Val
>WENV183698511
OZSS01001417
359842
Alphaproteobacteria
GAC
Val
>WENV183699354
OZSS01022241
59164
Alphaproteobacteria
GAG
Leu
>WENV183699295
OZSS01019661
160158
Alphaproteobacteria
GAT
Ile
>WENV183698672
OZSS01003054
340288
Alphaproteobacteria
GCC
Gly
>WENV183700308
OZSS01170898
370641
Alphaproteobacteria
GCC
Gly
>WENV183700038
OZSS01087653
370641
Alphaproteobacteria
GCC
Gly
>WENV183699471
OZSS01027882
370641
Alphaproteobacteria
GCC
Gly
>WENV183698520
OZSS01001491
23468
Alphaproteobacteria
GCT
Ser
>WENV183699389
OZSS01023612
23672
Alphaproteobacteria
GCT
Ser
>WENV183699113
OZSS01012460
23561
Alphaproteobacteria
GGA
Ser
>WENV183698571
OZSS01001976
28682
Alphaproteobacteria
GGA
Ser
>WENV183698658
OZSS01002882
163860
Alphaproteobacteria
GGG
Pro
>WENV183700002
OZSS01080799
343498
Alphaproteobacteria
GGT
Thr
>WENV183699398
OZSS01024062
150356
Alphaproteobacteria
GTC
Asp
>WENV183699303
OZSS01020262
150356
Alphaproteobacteria
GTC
Asp
>WENV183698380
OZSS01000753
338282
Alphaproteobacteria
GTT
Asn
>WENV183699499
OZSS01029017
249928
Alphaproteobacteria
TAC
Val
>WENV183700383
OZSS01213511
412424
Alphaproteobacteria
TCC
Gly
>WENV183698660
OZSS01002882
412424
Alphaproteobacteria
TCC
Gly
>WENV183698612
OZSS01002313
29831
Alphaproteobacteria
TGA
Ser
>WENV183698711
OZSS01003564
276379
Alphaproteobacteria
TGC
Ala
>WENV183700097
OZSS01098729
283763
Alphaproteobacteria
TGC
Ala
>WENV183699277
OZSS01019018
242540
Alphaproteobacteria
TGC
Ala
>WENV183698992
OZSS01009005
281594
Alphaproteobacteria
TGT
Thr
>WENV183698650
OZSS01002777
339722
Alphaproteobacteria
TTG
Gln
>WENV183699717
OZSS01045699
237740
Alphaproteobacteria
TTT
Lys
>WENV183700094
OZSS01098676
266073
Alphaproteobacteria
TTT
Lys
>WENV183699534
OZSS01030940
266073
Alphaproteobacteria
TTT
Lys
>WENV183700321
OZSS01178348
266073
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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