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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183532262
OOAD01000070
245370
Bacillota
TGT
Thr
>WENV183532265
OOAD01000070
243098
Bacillota
GGT
Thr
>WENV183532274
OOAD01000086
156937
Bacillota
GTG
His
>WENV183532355
OOAD01000267
144594
Bacillota
CAC
Val
>WENV183532377
OOAD01000344
144612
Bacillota
TCT
Arg
>WENV183532390
OOAD01000377
58712
Bacillota
CAG
Leu
>WENV183532403
OOAD01000434
235127
Bacillota
TTT
Lys
>WENV183532418
OOAD01000511
37269
Bacillota
TGA
Ser
>WENV183532425
OOAD01000548
338128
Bacillota
TTC
Glu
>WENV183532438
OOAD01000709
114075
Bacillota
TAG
Leu
>WENV183532446
OOAD01000764
235095
Bacillota
GGT
Thr
>WENV183532447
OOAD01000765
196632
Bacillota
GTC
Asp
>WENV183532448
OOAD01000765
245344
Bacillota
GAA
Phe
>WENV183532474
OOAD01000924
235098
Bacillota
GAC
Val
>WENV183532476
OOAD01000970
411549
Bacillota
TTG
Gln
>WENV183532477
OOAD01000971
238974
Bacillota
GAA
Phe
>WENV183532479
OOAD01000976
338129
Bacillota
TGT
Thr
>WENV183532496
OOAD01001149
411547
Bacillota
CTG
Gln
>WENV183532497
OOAD01001149
245298
Bacillota
CGG
Pro
>WENV183532509
OOAD01001257
256380
Bacillota
>WENV183532516
OOAD01001356
11034
Bacillota
GGA
Ser
>WENV183532519
OOAD01001409
411547
Bacillota
CTG
Gln
>WENV183532520
OOAD01001409
245298
Bacillota
CGG
Pro
>WENV183532523
OOAD01001415
58712
Bacillota
CAG
Leu
>WENV183532530
OOAD01001484
41154
Bacillota
TAA
Leu
>WENV183532538
OOAD01001551
144610
Bacillota
GTG
His
>WENV183532544
OOAD01001625
196632
Bacillota
GTC
Asp
>WENV183532545
OOAD01001625
344240
Bacillota
GCC
Gly
>WENV183532547
OOAD01001626
37213
Bacillota
TGA
Ser
>WENV183532553
OOAD01001698
411547
Bacillota
CTG
Gln
>WENV183532555
OOAD01001710
411549
Bacillota
TTG
Gln
>WENV183532558
OOAD01001766
148188
Bacillota
CCG
Arg
>WENV183532575
OOAD01002146
144621
Bacillota
GTT
Asn
>WENV183532577
OOAD01002200
411547
Bacillota
CTG
Gln
>WENV183532578
OOAD01002200
245298
Bacillota
CGG
Pro
>WENV183532586
OOAD01002404
11034
Bacillota
GGA
Ser
>WENV183532588
OOAD01002454
235095
Bacillota
GGT
Thr
>WENV183532589
OOAD01002514
144583
Bacillota
ACG
Arg
>WENV183532593
OOAD01002569
148188
Bacillota
CCG
Arg
>WENV183532603
OOAD01002732
21693
Bacillota
GCT
Ser
>WENV183532604
OOAD01002733
419877
Bacillota
TCC
Gly
>WENV183532620
OOAD01003016
309417
Bacillota
GGC
Ala
>WENV183532625
OOAD01003088
44854
Bacillota
TGA
Ser
>WENV183532626
OOAD01003088
4624
Bacillota
GCT
Ser
>WENV183532630
OOAD01003181
338128
Bacillota
TTC
Glu
>WENV183532634
OOAD01003365
100326
Bacillota
GTA
Tyr
>WENV183532645
OOAD01003643
235171
Bacillota
CCA
Trp
>WENV183532646
OOAD01003643
196621
Bacillota
GTC
Asp
>WENV183532652
OOAD01003769
144612
Bacillota
TCT
Arg
>WENV183532656
OOAD01003968
235124
Bacillota
TGG
Pro
>WENV183532657
OOAD01003997
58712
Bacillota
CAG
Leu
>WENV183532660
OOAD01004103
144621
Bacillota
GTT
Asn
>WENV183532681
OOAD01004853
419945
Bacillota
GCA
Cys
>WENV183532687
OOAD01004980
338149
Bacillota
CTC
Glu
>WENV183532688
OOAD01004980
272992
Bacillota
CTT
Lys
>WENV183532695
OOAD01005431
235124
Bacillota
TGG
Pro
>WENV183532696
OOAD01005457
235098
Bacillota
GAC
Val
>WENV183532709
OOAD01005907
235098
Bacillota
GAC
Val
>WENV183532717
OOAD01006263
147684
Bacillota
ACG
Arg
>WENV183532738
OOAD01007199
429429
Bacillota
CCA
Trp
>WENV183532743
OOAD01007660
304022
Bacillota
GCC
Gly
>WENV183532748
OOAD01007913
44854
Bacillota
TGA
Ser
>WENV183532749
OOAD01007913
4624
Bacillota
GCT
Ser
>WENV183532756
OOAD01008510
80612
Bacillota
GTA
Tyr
>WENV183532776
OOAD01010097
413152
Bacillota
TCC
Gly
>WENV183532791
OOAD01011032
309417
Bacillota
GGC
Ala
>WENV183532829
OOAD01014126
411547
Bacillota
CTG
Gln
>WENV183532832
OOAD01014389
235124
Bacillota
TGG
Pro
>WENV183532836
OOAD01014681
238974
Bacillota
GAA
Phe
>WENV183532841
OOAD01015885
198159
Bacillota
CAT
Met
>WENV183532849
OOAD01016041
338152
Bacillota
TTC
Glu
>WENV183532850
OOAD01016041
241432
Bacillota
TGT
Thr
>WENV183532859
OOAD01017257
299139
Bacillota
TGC
Ala
>WENV183532873
OOAD01018890
144763
Bacillota
TGG
Pro
>WENV183532874
OOAD01018890
144767
Bacillota
GTG
His
>WENV183532875
OOAD01018890
411585
Bacillota
GCA
Cys
>WENV183532920
OOAD01024648
379268
Bacillota
TTC
Glu
>WENV183532921
OOAD01024648
411584
Bacillota
TCC
Gly
>WENV183532931
OOAD01027094
240017
Bacillota
GCC
Gly
>WENV183532946
OOAD01029774
235150
Bacillota
TGC
Ala
>WENV183532949
OOAD01030547
298639
Bacillota
GTT
Asn
>WENV183532981
OOAD01036474
236012
Bacillota
GTC
Asp
>WENV183532988
OOAD01037138
313454
Bacillota
GAA
Phe
>WENV183532990
OOAD01038483
238910
Bacillota
CTT
Lys
>WENV183532995
OOAD01039418
235078
Bacillota
TAC
Val
>WENV183532996
OOAD01039418
157838
Bacillota
GTC
Asp
>WENV183533009
OOAD01043133
201704
Bacillota
GAT
Ile
>WENV183533018
OOAD01045668
412387
Bacillota
GCA
Cys
>WENV183533021
OOAD01047931
299139
Bacillota
TGC
Ala
>WENV183533022
OOAD01047931
198135
Bacillota
GAT
Ile
>WENV183533054
OOAD01058413
145469
Bacillota
TCT
Arg
>WENV183533055
OOAD01058413
237287
Bacillota
GTG
His
>WENV183533058
OOAD01059328
361659
Bacillota
GCC
Gly
>WENV183533059
OOAD01059328
411739
Bacillota
TCC
Gly
>WENV183533060
OOAD01059328
201667
Bacillota
TCT
Arg
>WENV183533061
OOAD01059328
279635
Bacillota
GTG
His
>WENV183533063
OOAD01059328
237963
Bacillota
TTT
Lys
>WENV183533094
OOAD01071665
235079
Bacillota
GAA
Phe
>WENV183533098
OOAD01073675
245296
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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