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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183543574
OOAN01041848
196621
Bacillota
GTC
Asp
>WENV183543437
OOAN01013624
202812
Bacillota
CAT
Met
>WENV183543255
OOAN01003262
309417
Bacillota
GGC
Ala
>WENV183543300
OOAN01004645
309417
Bacillota
GGC
Ala
>WENV183543479
OOAN01019138
309417
Bacillota
GGC
Ala
>WENV183542970
OOAN01000415
144612
Bacillota
TCT
Arg
>WENV183543273
OOAN01003759
144612
Bacillota
TCT
Arg
>WENV183543489
OOAN01020020
144612
Bacillota
TCT
Arg
>WENV183543346
OOAN01007106
235134
Bacillota
GAA
Phe
>WENV183543222
OOAN01002535
235098
Bacillota
GAC
Val
>WENV183543252
OOAN01003154
235098
Bacillota
GAC
Val
>WENV183543269
OOAN01003622
235098
Bacillota
GAC
Val
>WENV183543257
OOAN01003359
338152
Bacillota
TTC
Glu
>WENV183542980
OOAN01000448
44854
Bacillota
TGA
Ser
>WENV183543158
OOAN01001524
235154
Bacillota
GTT
Asn
>WENV183543329
OOAN01006110
144577
Bacillota
GAT
Ile
>WENV183543276
OOAN01003810
304022
Bacillota
GCC
Gly
>WENV183543223
OOAN01002545
304022
Bacillota
GCC
Gly
>WENV183542928
OOAN01000271
304022
Bacillota
GCC
Gly
>WENV183543538
OOAN01028583
246023
Bacillota
TGC
Ala
>WENV183543134
OOAN01001326
59312
Bacillota
CAG
Leu
>WENV183543130
OOAN01001262
238910
Bacillota
CTT
Lys
>WENV183543442
OOAN01014204
338147
Bacillota
CTC
Glu
>WENV183543468
OOAN01017503
235150
Bacillota
TGC
Ala
>WENV183543464
OOAN01016772
235137
Bacillota
TGC
Ala
>WENV183543321
OOAN01005798
429429
Bacillota
CCA
Trp
>WENV183543128
OOAN01001174
11034
Bacillota
GGA
Ser
>WENV183542927
OOAN01000271
235079
Bacillota
GAA
Phe
>WENV183543328
OOAN01006110
235087
Bacillota
TGC
Ala
>WENV183543295
OOAN01004422
245298
Bacillota
CGG
Pro
>WENV183543171
OOAN01001560
245298
Bacillota
CGG
Pro
>WENV183542935
OOAN01000296
245298
Bacillota
CGG
Pro
>WENV183543425
OOAN01012456
413152
Bacillota
TCC
Gly
>WENV183543537
OOAN01028583
201704
Bacillota
GAT
Ile
>WENV183543160
OOAN01001524
144599
Bacillota
GTC
Asp
>WENV183542999
OOAN01000548
100326
Bacillota
GTA
Tyr
>WENV183543294
OOAN01004422
411547
Bacillota
CTG
Gln
>WENV183543219
OOAN01002349
411547
Bacillota
CTG
Gln
>WENV183543170
OOAN01001560
411547
Bacillota
CTG
Gln
>WENV183542934
OOAN01000296
411547
Bacillota
CTG
Gln
>WENV183542981
OOAN01000448
4624
Bacillota
GCT
Ser
>WENV183543256
OOAN01003279
235095
Bacillota
GGT
Thr
>WENV183542997
OOAN01000541
419639
Bacillota
GCA
Cys
>WENV183543212
OOAN01002260
411549
Bacillota
TTG
Gln
>WENV183543169
OOAN01001560
411549
Bacillota
TTG
Gln
>WENV183543152
OOAN01001477
411549
Bacillota
TTG
Gln
>WENV183543029
OOAN01000627
411549
Bacillota
TTG
Gln
>WENV183543390
OOAN01009103
245386
Bacillota
CCA
Trp
>WENV183543174
OOAN01001611
148188
Bacillota
CCG
Arg
>WENV183543132
OOAN01001285
235124
Bacillota
TGG
Pro
>WENV183543078
OOAN01000931
235124
Bacillota
TGG
Pro
>WENV183543245
OOAN01002941
338129
Bacillota
TGT
Thr
>WENV183543540
OOAN01029003
144583
Bacillota
ACG
Arg
>WENV183543573
OOAN01041848
235171
Bacillota
CCA
Trp
>WENV183543001
OOAN01000548
238974
Bacillota
GAA
Phe
>WENV183543253
OOAN01003182
277200
Bacillota
GGC
Ala
>WENV183543458
OOAN01016482
243098
Bacillota
GGT
Thr
>WENV183543237
OOAN01002793
58712
Bacillota
CAG
Leu
>WENV183543080
OOAN01000944
58712
Bacillota
CAG
Leu
>WENV183543285
OOAN01004344
245296
Bacillota
CCC
Gly
>WENV183543033
OOAN01000672
245296
Bacillota
CCC
Gly
>WENV183542937
OOAN01000299
245296
Bacillota
CCC
Gly
>WENV183543330
OOAN01006111
272992
Bacillota
CTT
Lys
>WENV183542947
OOAN01000331
344240
Bacillota
GCC
Gly
>WENV183542899
OOAN01000194
196632
Bacillota
GTC
Asp
>WENV183543441
OOAN01014161
144594
Bacillota
CAC
Val
>WENV183543020
OOAN01000587
414486
Bacillota
CCC
Gly
>WENV183543279
OOAN01004038
114075
Bacillota
TAG
Leu
>WENV183543177
OOAN01001670
338128
Bacillota
TTC
Glu
>WENV183543028
OOAN01000615
338128
Bacillota
TTC
Glu
>WENV183542900
OOAN01000194
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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