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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183561094
OOBV01000009
263765
Bacillota
TAC
Val
>WENV183561155
OOBV01000059
37269
Bacillota
TGA
Ser
>WENV183561170
OOBV01000072
313454
Bacillota
GAA
Phe
>WENV183561229
OOBV01000110
44854
Bacillota
TGA
Ser
>WENV183561230
OOBV01000110
4624
Bacillota
GCT
Ser
>WENV183561239
OOBV01000122
158247
Bacillota
>WENV183561265
OOBV01000160
44854
Bacillota
TGA
Ser
>WENV183561266
OOBV01000160
4624
Bacillota
GCT
Ser
>WENV183561282
OOBV01000183
245296
Bacillota
CCC
Gly
>WENV183561309
OOBV01000255
235098
Bacillota
GAC
Val
>WENV183561318
OOBV01000272
338149
Bacillota
CTC
Glu
>WENV183561319
OOBV01000272
144621
Bacillota
GTT
Asn
>WENV183561321
OOBV01000279
58712
Bacillota
CAG
Leu
>WENV183561322
OOBV01000283
245296
Bacillota
CCC
Gly
>WENV183561326
OOBV01000292
58712
Bacillota
CAG
Leu
>WENV183561330
OOBV01000308
11034
Bacillota
GGA
Ser
>WENV183561341
OOBV01000343
338147
Bacillota
CTC
Glu
>WENV183561359
OOBV01000365
245298
Bacillota
CGG
Pro
>WENV183561358
OOBV01000365
411547
Bacillota
CTG
Gln
>WENV183561363
OOBV01000374
144612
Bacillota
TCT
Arg
>WENV183561372
OOBV01000382
338128
Bacillota
TTC
Glu
>WENV183561388
OOBV01000431
411547
Bacillota
CTG
Gln
>WENV183561393
OOBV01000439
144612
Bacillota
TCT
Arg
>WENV183561396
OOBV01000446
429429
Bacillota
CCA
Trp
>WENV183561400
OOBV01000451
309417
Bacillota
GGC
Ala
>WENV183561401
OOBV01000451
411549
Bacillota
TTG
Gln
>WENV183561404
OOBV01000462
411547
Bacillota
CTG
Gln
>WENV183561413
OOBV01000499
235095
Bacillota
GGT
Thr
>WENV183561414
OOBV01000501
338129
Bacillota
TGT
Thr
>WENV183561448
OOBV01000638
338128
Bacillota
TTC
Glu
>WENV183561452
OOBV01000643
240017
Bacillota
GCC
Gly
>WENV183561451
OOBV01000643
263765
Bacillota
TAC
Val
>WENV183561476
OOBV01000728
44854
Bacillota
TGA
Ser
>WENV183561477
OOBV01000728
4624
Bacillota
GCT
Ser
>WENV183561514
OOBV01000839
196621
Bacillota
GTC
Asp
>WENV183561516
OOBV01000839
235095
Bacillota
GGT
Thr
>WENV183561515
OOBV01000839
235095
Bacillota
GGT
Thr
>WENV183561513
OOBV01000839
235171
Bacillota
CCA
Trp
>WENV183561521
OOBV01000855
144583
Bacillota
ACG
Arg
>WENV183561529
OOBV01000877
235098
Bacillota
GAC
Val
>WENV183561534
OOBV01000931
11034
Bacillota
GGA
Ser
>WENV183561537
OOBV01000960
411547
Bacillota
CTG
Gln
>WENV183561545
OOBV01001022
144621
Bacillota
GTT
Asn
>WENV183561555
OOBV01001064
309417
Bacillota
GGC
Ala
>WENV183561556
OOBV01001065
148188
Bacillota
CCG
Arg
>WENV183561570
OOBV01001095
272992
Bacillota
CTT
Lys
>WENV183561594
OOBV01001199
309417
Bacillota
GGC
Ala
>WENV183561595
OOBV01001199
144621
Bacillota
GTT
Asn
>WENV183561607
OOBV01001253
338147
Bacillota
CTC
Glu
>WENV183561614
OOBV01001309
58712
Bacillota
CAG
Leu
>WENV183561619
OOBV01001345
338149
Bacillota
CTC
Glu
>WENV183561620
OOBV01001345
144621
Bacillota
GTT
Asn
>WENV183561646
OOBV01001522
338152
Bacillota
TTC
Glu
>WENV183561645
OOBV01001522
287000
Bacillota
GTT
Asn
>WENV183561664
OOBV01001668
245298
Bacillota
CGG
Pro
>WENV183561663
OOBV01001668
411547
Bacillota
CTG
Gln
>WENV183561665
OOBV01001675
245296
Bacillota
CCC
Gly
>WENV183561666
OOBV01001679
235124
Bacillota
TGG
Pro
>WENV183561676
OOBV01001758
411549
Bacillota
TTG
Gln
>WENV183561695
OOBV01001913
235095
Bacillota
GGT
Thr
>WENV183561696
OOBV01001920
293599
Bacillota
CTT
Lys
>WENV183561698
OOBV01001935
11034
Bacillota
GGA
Ser
>WENV183561706
OOBV01002038
58712
Bacillota
CAG
Leu
>WENV183561711
OOBV01002088
235124
Bacillota
TGG
Pro
>WENV183561713
OOBV01002113
309417
Bacillota
GGC
Ala
>WENV183561720
OOBV01002248
144594
Bacillota
CAC
Val
>WENV183561739
OOBV01002643
144594
Bacillota
CAC
Val
>WENV183561762
OOBV01003276
413152
Bacillota
TCC
Gly
>WENV183561767
OOBV01003302
267649
Bacillota
TAC
Val
>WENV183561769
OOBV01003312
155113
Bacillota
CGG
Pro
>WENV183561777
OOBV01003675
80612
Bacillota
GTA
Tyr
>WENV183561814
OOBV01004960
235124
Bacillota
TGG
Pro
>WENV183561816
OOBV01005019
235098
Bacillota
GAC
Val
>WENV183561828
OOBV01005484
148188
Bacillota
CCG
Arg
>WENV183561830
OOBV01005510
148188
Bacillota
CCG
Arg
>WENV183561833
OOBV01005586
157838
Bacillota
GTC
Asp
>WENV183561835
OOBV01005657
296878
Bacillota
GTT
Asn
>WENV183561837
OOBV01005741
152492
Bacillota
GGG
Pro
>WENV183561840
OOBV01005779
340263
Bacillota
TTC
Glu
>WENV183561839
OOBV01005779
239078
Bacillota
TTT
Lys
>WENV183561845
OOBV01006031
235079
Bacillota
GAA
Phe
>WENV183561864
OOBV01006818
338149
Bacillota
CTC
Glu
>WENV183561865
OOBV01006818
144621
Bacillota
GTT
Asn
>WENV183561900
OOBV01008428
245298
Bacillota
CGG
Pro
>WENV183561899
OOBV01008428
411547
Bacillota
CTG
Gln
>WENV183561905
OOBV01008738
338149
Bacillota
CTC
Glu
>WENV183561906
OOBV01008738
144621
Bacillota
GTT
Asn
>WENV183561925
OOBV01009239
235294
Bacillota
TGC
Ala
>WENV183561935
OOBV01010371
144621
Bacillota
GTT
Asn
>WENV183561950
OOBV01011298
239832
Bacillota
TGT
Thr
>WENV183561967
OOBV01013350
44854
Bacillota
TGA
Ser
>WENV183561968
OOBV01013350
4624
Bacillota
GCT
Ser
>WENV183561969
OOBV01013362
298639
Bacillota
GTT
Asn
>WENV183561987
OOBV01014840
247734
Bacillota
TGC
Ala
>WENV183561999
OOBV01015870
309417
Bacillota
GGC
Ala
>WENV183562001
OOBV01015940
309417
Bacillota
GGC
Ala
>WENV183562004
OOBV01016435
144621
Bacillota
GTT
Asn
>WENV183562005
OOBV01016561
304022
Bacillota
GCC
Gly
>WENV183562006
OOBV01016561
235117
Bacillota
TAC
Val
>WENV183562010
OOBV01017705
235124
Bacillota
TGG
Pro
>WENV183562011
OOBV01017777
41154
Bacillota
TAA
Leu
>WENV183562041
OOBV01022464
235098
Bacillota
GAC
Val
>WENV183562064
OOBV01026973
58712
Bacillota
CAG
Leu
>WENV183562066
OOBV01027509
235137
Bacillota
TGC
Ala
>WENV183562099
OOBV01038611
237963
Bacillota
TTT
Lys
>WENV183562107
OOBV01041573
379268
Bacillota
TTC
Glu
>WENV183562110
OOBV01041573
235290
Bacillota
TTG
Gln
>WENV183562108
OOBV01041573
411584
Bacillota
TCC
Gly
>WENV183562109
OOBV01041573
144762
Bacillota
TCT
Arg
>WENV183562124
OOBV01043802
341763
Bacillota
CTC
Glu
>WENV183562140
OOBV01046223
413152
Bacillota
TCC
Gly
>WENV183562157
OOBV01049602
153911
Bacillota
GAT
Ile
>WENV183562169
OOBV01052199
246023
Bacillota
TGC
Ala
>WENV183562168
OOBV01052199
201704
Bacillota
GAT
Ile
>WENV183562188
OOBV01061979
339890
Bacillota
TTG
Gln
>WENV183562189
OOBV01061979
235127
Bacillota
TTT
Lys
>WENV183562186
OOBV01061979
147674
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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