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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183574688
OOCH01053176
361659
Bacillota
GCC
Gly
>WENV183573831
OOCH01000961
309417
Bacillota
GGC
Ala
>WENV183574289
OOCH01006235
309417
Bacillota
GGC
Ala
>WENV183573962
OOCH01001706
144612
Bacillota
TCT
Arg
>WENV183574132
OOCH01003048
235134
Bacillota
GAA
Phe
>WENV183574171
OOCH01003436
235098
Bacillota
GAC
Val
>WENV183574399
OOCH01011163
235098
Bacillota
GAC
Val
>WENV183573746
OOCH01000625
338152
Bacillota
TTC
Glu
>WENV183574149
OOCH01003243
340263
Bacillota
TTC
Glu
>WENV183574326
OOCH01007589
44854
Bacillota
TGA
Ser
>WENV183574286
OOCH01006148
44854
Bacillota
TGA
Ser
>WENV183573767
OOCH01000716
44854
Bacillota
TGA
Ser
>WENV183574554
OOCH01026022
144577
Bacillota
GAT
Ile
>WENV183574343
OOCH01008228
59312
Bacillota
CAG
Leu
>WENV183574101
OOCH01002705
239080
Bacillota
CTG
Gln
>WENV183574174
OOCH01003474
238910
Bacillota
CTT
Lys
>WENV183573478
OOCH01000108
97943
Bacillota
GTA
Tyr
>WENV183573836
OOCH01001000
338147
Bacillota
CTC
Glu
>WENV183573420
OOCH01000056
338147
Bacillota
CTC
Glu
>WENV183573419
OOCH01000056
338147
Bacillota
CTC
Glu
>WENV183573418
OOCH01000056
338147
Bacillota
CTC
Glu
>WENV183574585
OOCH01029948
235150
Bacillota
TGC
Ala
>WENV183573955
OOCH01001670
155273
Bacillota
CAT
Met
>WENV183573930
OOCH01001413
340802
Bacillota
TTG
Gln
>WENV183573606
OOCH01000282
293599
Bacillota
CTT
Lys
>WENV183574123
OOCH01002930
291442
Bacillota
CTT
Lys
>WENV183573952
OOCH01001609
429429
Bacillota
CCA
Trp
>WENV183574491
OOCH01017539
44859
Bacillota
AAG
Leu
>WENV183573476
OOCH01000108
186380
Bacillota
GTC
Asp
>WENV183574072
OOCH01002323
11034
Bacillota
GGA
Ser
>WENV183574297
OOCH01006338
340265
Bacillota
GCC
Gly
>WENV183574553
OOCH01026022
235087
Bacillota
TGC
Ala
>WENV183574733
OOCH01068164
173314
Bacillota
GAT
Ile
>WENV183574367
OOCH01009269
245298
Bacillota
CGG
Pro
>WENV183574265
OOCH01005464
245298
Bacillota
CGG
Pro
>WENV183573878
OOCH01001167
245298
Bacillota
CGG
Pro
>WENV183574529
OOCH01022131
37269
Bacillota
TGA
Ser
>WENV183573456
OOCH01000093
37269
Bacillota
TGA
Ser
>WENV183573745
OOCH01000625
287000
Bacillota
GTT
Asn
>WENV183574487
OOCH01017254
162445
Bacillota
CAT
Met
>WENV183574717
OOCH01061392
201704
Bacillota
GAT
Ile
>WENV183574377
OOCH01009983
152492
Bacillota
GGG
Pro
>WENV183573380
OOCH01000012
100326
Bacillota
GTA
Tyr
>WENV183573929
OOCH01001413
144610
Bacillota
GTG
His
>WENV183574674
OOCH01048652
353537
Bacillota
GTT
Asn
>WENV183574133
OOCH01003048
240017
Bacillota
GCC
Gly
>WENV183574366
OOCH01009269
411547
Bacillota
CTG
Gln
>WENV183574271
OOCH01005611
411547
Bacillota
CTG
Gln
>WENV183574264
OOCH01005464
411547
Bacillota
CTG
Gln
>WENV183573877
OOCH01001167
411547
Bacillota
CTG
Gln
>WENV183573720
OOCH01000561
411547
Bacillota
CTG
Gln
>WENV183574686
OOCH01052729
147684
Bacillota
ACG
Arg
>WENV183574327
OOCH01007589
4624
Bacillota
GCT
Ser
>WENV183574287
OOCH01006148
4624
Bacillota
GCT
Ser
>WENV183573768
OOCH01000716
4624
Bacillota
GCT
Ser
>WENV183573475
OOCH01000108
263765
Bacillota
TAC
Val
>WENV183574228
OOCH01004375
412387
Bacillota
GCA
Cys
>WENV183574581
OOCH01029569
235095
Bacillota
GGT
Thr
>WENV183574112
OOCH01002790
235095
Bacillota
GGT
Thr
>WENV183573942
OOCH01001547
235095
Bacillota
GGT
Thr
>WENV183573786
OOCH01000785
344183
Bacillota
CTG
Gln
>WENV183574690
OOCH01053176
150597
Bacillota
TCT
Arg
>WENV183574150
OOCH01003243
304759
Bacillota
TAC
Val
>WENV183574022
OOCH01002051
411549
Bacillota
TTG
Gln
>WENV183573876
OOCH01001167
411549
Bacillota
TTG
Gln
>WENV183573759
OOCH01000686
411549
Bacillota
TTG
Gln
>WENV183574464
OOCH01015454
148188
Bacillota
CCG
Arg
>WENV183574460
OOCH01015255
148188
Bacillota
CCG
Arg
>WENV183574209
OOCH01003844
148188
Bacillota
CCG
Arg
>WENV183574116
OOCH01002845
148188
Bacillota
CCG
Arg
>WENV183574541
OOCH01024051
80612
Bacillota
GTA
Tyr
>WENV183574442
OOCH01014076
241432
Bacillota
TGT
Thr
>WENV183574689
OOCH01053176
411739
Bacillota
TCC
Gly
>WENV183574158
OOCH01003319
235124
Bacillota
TGG
Pro
>WENV183574694
OOCH01053176
237963
Bacillota
TTT
Lys
>WENV183574484
OOCH01016976
338129
Bacillota
TGT
Thr
>WENV183574692
OOCH01053176
279635
Bacillota
GTG
His
>WENV183574726
OOCH01065033
144583
Bacillota
ACG
Arg
>WENV183573749
OOCH01000625
144652
Bacillota
GTC
Asp
>WENV183574232
OOCH01004473
144621
Bacillota
GTT
Asn
>WENV183573830
OOCH01000961
144621
Bacillota
GTT
Asn
>WENV183574409
OOCH01011596
58712
Bacillota
CAG
Leu
>WENV183574267
OOCH01005487
58712
Bacillota
CAG
Leu
>WENV183574254
OOCH01005268
58712
Bacillota
CAG
Leu
>WENV183574222
OOCH01004240
58712
Bacillota
CAG
Leu
>WENV183573907
OOCH01001345
58712
Bacillota
CAG
Leu
>WENV183574170
OOCH01003430
245296
Bacillota
CCC
Gly
>WENV183574079
OOCH01002421
245296
Bacillota
CCC
Gly
>WENV183574148
OOCH01003243
239078
Bacillota
TTT
Lys
>WENV183574501
OOCH01019351
299139
Bacillota
TGC
Ala
>WENV183574309
OOCH01006892
144594
Bacillota
CAC
Val
>WENV183574159
OOCH01003330
95563
Bacillota
GTA
Tyr
>WENV183574097
OOCH01002667
338128
Bacillota
TTC
Glu
>WENV183574042
OOCH01002129
338128
Bacillota
TTC
Glu
>WENV183573894
OOCH01001266
338128
Bacillota
TTC
Glu
>WENV183573739
OOCH01000599
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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