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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
156 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183588245
OOCV01000131
11034
Bacillota
GGA
Ser
>WENV183588291
OOCV01000205
411549
Bacillota
TTG
Gln
>WENV183588292
OOCV01000205
411547
Bacillota
CTG
Gln
>WENV183588293
OOCV01000205
245298
Bacillota
CGG
Pro
>WENV183588297
OOCV01000216
338149
Bacillota
CTC
Glu
>WENV183588298
OOCV01000216
144621
Bacillota
GTT
Asn
>WENV183588305
OOCV01000227
235124
Bacillota
TGG
Pro
>WENV183588323
OOCV01000257
58712
Bacillota
CAG
Leu
>WENV183588331
OOCV01000283
429429
Bacillota
CCA
Trp
>WENV183588339
OOCV01000302
338129
Bacillota
TGT
Thr
>WENV183588352
OOCV01000347
144599
Bacillota
GTC
Asp
>WENV183588353
OOCV01000347
302150
Bacillota
TAC
Val
>WENV183588355
OOCV01000347
100326
Bacillota
GTA
Tyr
>WENV183588357
OOCV01000347
238974
Bacillota
GAA
Phe
>WENV183588359
OOCV01000351
144612
Bacillota
TCT
Arg
>WENV183588362
OOCV01000359
309417
Bacillota
GGC
Ala
>WENV183588391
OOCV01000475
267649
Bacillota
TAC
Val
>WENV183588401
OOCV01000522
100326
Bacillota
GTA
Tyr
>WENV183588403
OOCV01000522
238974
Bacillota
GAA
Phe
>WENV183588411
OOCV01000527
235117
Bacillota
TAC
Val
>WENV183588412
OOCV01000527
196621
Bacillota
GTC
Asp
>WENV183588413
OOCV01000527
235079
Bacillota
GAA
Phe
>WENV183588414
OOCV01000527
304022
Bacillota
GCC
Gly
>WENV183588423
OOCV01000546
245296
Bacillota
CCC
Gly
>WENV183588426
OOCV01000575
340265
Bacillota
GCC
Gly
>WENV183588427
OOCV01000575
340265
Bacillota
GCC
Gly
>WENV183588432
OOCV01000609
340265
Bacillota
GCC
Gly
>WENV183588435
OOCV01000618
309417
Bacillota
GGC
Ala
>WENV183588436
OOCV01000620
58712
Bacillota
CAG
Leu
>WENV183588439
OOCV01000646
11034
Bacillota
GGA
Ser
>WENV183588442
OOCV01000684
256380
Bacillota
>WENV183588444
OOCV01000695
235098
Bacillota
GAC
Val
>WENV183588463
OOCV01000803
411549
Bacillota
TTG
Gln
>WENV183588464
OOCV01000804
144612
Bacillota
TCT
Arg
>WENV183588466
OOCV01000811
263765
Bacillota
TAC
Val
>WENV183588468
OOCV01000811
235134
Bacillota
GAA
Phe
>WENV183588469
OOCV01000811
240017
Bacillota
GCC
Gly
>WENV183588470
OOCV01000812
235098
Bacillota
GAC
Val
>WENV183588471
OOCV01000821
144621
Bacillota
GTT
Asn
>WENV183588474
OOCV01000824
411547
Bacillota
CTG
Gln
>WENV183588477
OOCV01000858
58712
Bacillota
CAG
Leu
>WENV183588482
OOCV01000915
239080
Bacillota
CTG
Gln
>WENV183588489
OOCV01000986
11034
Bacillota
GGA
Ser
>WENV183588498
OOCV01001055
144594
Bacillota
CAC
Val
>WENV183588504
OOCV01001078
235697
Bacillota
GTT
Asn
>WENV183588506
OOCV01001082
239078
Bacillota
TTT
Lys
>WENV183588507
OOCV01001082
340263
Bacillota
TTC
Glu
>WENV183588516
OOCV01001211
235098
Bacillota
GAC
Val
>WENV183588529
OOCV01001331
419639
Bacillota
GCA
Cys
>WENV183588534
OOCV01001363
148239
Bacillota
TCT
Arg
>WENV183588535
OOCV01001363
144610
Bacillota
GTG
His
>WENV183588541
OOCV01001445
144594
Bacillota
CAC
Val
>WENV183588544
OOCV01001497
338129
Bacillota
TGT
Thr
>WENV183588548
OOCV01001546
411547
Bacillota
CTG
Gln
>WENV183588559
OOCV01001679
338128
Bacillota
TTC
Glu
>WENV183588575
OOCV01001886
411549
Bacillota
TTG
Gln
>WENV183588582
OOCV01002137
309417
Bacillota
GGC
Ala
>WENV183588585
OOCV01002190
196632
Bacillota
GTC
Asp
>WENV183588586
OOCV01002190
245344
Bacillota
GAA
Phe
>WENV183588587
OOCV01002190
344240
Bacillota
GCC
Gly
>WENV183588589
OOCV01002193
235095
Bacillota
GGT
Thr
>WENV183588598
OOCV01002265
304022
Bacillota
GCC
Gly
>WENV183588599
OOCV01002270
235095
Bacillota
GGT
Thr
>WENV183588612
OOCV01002397
144594
Bacillota
CAC
Val
>WENV183588623
OOCV01002660
144612
Bacillota
TCT
Arg
>WENV183588626
OOCV01002687
411547
Bacillota
CTG
Gln
>WENV183588627
OOCV01002687
245298
Bacillota
CGG
Pro
>WENV183588628
OOCV01002692
338149
Bacillota
CTC
Glu
>WENV183588629
OOCV01002692
144621
Bacillota
GTT
Asn
>WENV183588630
OOCV01002697
196621
Bacillota
GTC
Asp
>WENV183588631
OOCV01002697
235095
Bacillota
GGT
Thr
>WENV183588639
OOCV01002842
148188
Bacillota
CCG
Arg
>WENV183588646
OOCV01002919
235079
Bacillota
GAA
Phe
>WENV183588647
OOCV01002919
304022
Bacillota
GCC
Gly
>WENV183588648
OOCV01002919
196621
Bacillota
GTC
Asp
>WENV183588649
OOCV01002919
304022
Bacillota
GCC
Gly
>WENV183588653
OOCV01002950
304022
Bacillota
GCC
Gly
>WENV183588655
OOCV01002950
80612
Bacillota
GTA
Tyr
>WENV183588657
OOCV01003024
144610
Bacillota
GTG
His
>WENV183588658
OOCV01003024
340802
Bacillota
TTG
Gln
>WENV183588660
OOCV01003098
235079
Bacillota
GAA
Phe
>WENV183588661
OOCV01003098
304022
Bacillota
GCC
Gly
>WENV183588662
OOCV01003098
196621
Bacillota
GTC
Asp
>WENV183588667
OOCV01003197
144621
Bacillota
GTT
Asn
>WENV183588671
OOCV01003217
304022
Bacillota
GCC
Gly
>WENV183588672
OOCV01003244
309417
Bacillota
GGC
Ala
>WENV183588676
OOCV01003395
235124
Bacillota
TGG
Pro
>WENV183588679
OOCV01003568
309417
Bacillota
GGC
Ala
>WENV183588681
OOCV01003658
235098
Bacillota
GAC
Val
>WENV183588682
OOCV01003668
304022
Bacillota
GCC
Gly
>WENV183588689
OOCV01003810
411547
Bacillota
CTG
Gln
>WENV183588696
OOCV01003994
235095
Bacillota
GGT
Thr
>WENV183588697
OOCV01003994
235171
Bacillota
CCA
Trp
>WENV183588698
OOCV01003994
196621
Bacillota
GTC
Asp
>WENV183588699
OOCV01003994
235095
Bacillota
GGT
Thr
>WENV183588700
OOCV01004018
245296
Bacillota
CCC
Gly
>WENV183588716
OOCV01004539
304022
Bacillota
GCC
Gly
>WENV183588726
OOCV01005050
148348
Bacillota
GTC
Asp
>WENV183588727
OOCV01005050
239076
Bacillota
GAA
Phe
>WENV183588733
OOCV01005050
340263
Bacillota
TTC
Glu
>WENV183588738
OOCV01005141
148188
Bacillota
CCG
Arg
>WENV183588745
OOCV01005682
304022
Bacillota
GCC
Gly
>WENV183588746
OOCV01005682
235117
Bacillota
TAC
Val
>WENV183588747
OOCV01005682
196621
Bacillota
GTC
Asp
>WENV183588756
OOCV01006150
338149
Bacillota
CTC
Glu
>WENV183588757
OOCV01006150
144621
Bacillota
GTT
Asn
>WENV183588761
OOCV01006533
338149
Bacillota
CTC
Glu
>WENV183588762
OOCV01006533
272992
Bacillota
CTT
Lys
>WENV183588766
OOCV01006615
243098
Bacillota
GGT
Thr
>WENV183588770
OOCV01006734
147684
Bacillota
ACG
Arg
>WENV183588777
OOCV01007236
411547
Bacillota
CTG
Gln
>WENV183588778
OOCV01007236
245298
Bacillota
CGG
Pro
>WENV183588779
OOCV01007444
148188
Bacillota
CCG
Arg
>WENV183588793
OOCV01008479
44854
Bacillota
TGA
Ser
>WENV183588794
OOCV01008479
4624
Bacillota
GCT
Ser
>WENV183588802
OOCV01009056
144583
Bacillota
ACG
Arg
>WENV183588806
OOCV01009369
235079
Bacillota
GAA
Phe
>WENV183588807
OOCV01009369
304022
Bacillota
GCC
Gly
>WENV183588808
OOCV01009520
272992
Bacillota
CTT
Lys
>WENV183588813
OOCV01010191
152492
Bacillota
GGG
Pro
>WENV183588815
OOCV01010242
235095
Bacillota
GGT
Thr
>WENV183588818
OOCV01010976
304022
Bacillota
GCC
Gly
>WENV183588820
OOCV01011349
201704
Bacillota
GAT
Ile
>WENV183588821
OOCV01011349
246023
Bacillota
TGC
Ala
>WENV183588844
OOCV01013369
245296
Bacillota
CCC
Gly
>WENV183588849
OOCV01013983
196621
Bacillota
GTC
Asp
>WENV183588850
OOCV01013983
235095
Bacillota
GGT
Thr
>WENV183588853
OOCV01014279
148188
Bacillota
CCG
Arg
>WENV183588862
OOCV01016429
163753
Bacillota
TGG
Pro
>WENV183588867
OOCV01016429
313104
Bacillota
TAC
Val
>WENV183588871
OOCV01016429
118077
Bacillota
>WENV183588872
OOCV01016429
144762
Bacillota
TCT
Arg
>WENV183588888
OOCV01019461
272992
Bacillota
CTT
Lys
>WENV183588897
OOCV01020653
411547
Bacillota
CTG
Gln
>WENV183588899
OOCV01020676
341763
Bacillota
CTC
Glu
>WENV183588913
OOCV01021798
338207
Bacillota
TTC
Glu
>WENV183588923
OOCV01023144
235098
Bacillota
GAC
Val
>WENV183588924
OOCV01023914
304022
Bacillota
GCC
Gly
>WENV183588934
OOCV01025372
144599
Bacillota
GTC
Asp
>WENV183588935
OOCV01025372
302150
Bacillota
TAC
Val
>WENV183588946
OOCV01027636
279635
Bacillota
GTG
His
>WENV183588948
OOCV01027636
237963
Bacillota
TTT
Lys
>WENV183588949
OOCV01027636
114359
Bacillota
TAG
Leu
>WENV183588950
OOCV01027636
361659
Bacillota
GCC
Gly
>WENV183588951
OOCV01027636
411739
Bacillota
TCC
Gly
>WENV183588952
OOCV01027636
201667
Bacillota
TCT
Arg
>WENV183588957
OOCV01028291
173314
Bacillota
GAT
Ile
>WENV183588958
OOCV01028396
338129
Bacillota
TGT
Thr
>WENV183588959
OOCV01028515
235124
Bacillota
TGG
Pro
>WENV183588968
OOCV01031232
144583
Bacillota
ACG
Arg
>WENV183588979
OOCV01035200
247734
Bacillota
TGC
Ala
>WENV183588983
OOCV01035396
267649
Bacillota
TAC
Val
>WENV183588990
OOCV01036536
235150
Bacillota
TGC
Ala
>WENV183588992
OOCV01036800
338149
Bacillota
CTC
Glu
>WENV183588993
OOCV01036800
144621
Bacillota
GTT
Asn
>WENV183588997
OOCV01037238
144583
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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