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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183592851
OOCZ01004413
24650
Bacillota
TAA
Leu
>WENV183593153
OOCZ01020858
158247
Bacillota
>WENV183592471
OOCZ01000381
144612
Bacillota
TCT
Arg
>WENV183592588
OOCZ01000899
144612
Bacillota
TCT
Arg
>WENV183592662
OOCZ01001340
144612
Bacillota
TCT
Arg
>WENV183592944
OOCZ01006760
267556
Bacillota
TAC
Val
>WENV183592590
OOCZ01000903
235098
Bacillota
GAC
Val
>WENV183593020
OOCZ01009410
235098
Bacillota
GAC
Val
>WENV183593120
OOCZ01017178
235098
Bacillota
GAC
Val
>WENV183592966
OOCZ01007216
338152
Bacillota
TTC
Glu
>WENV183593156
OOCZ01022275
44854
Bacillota
TGA
Ser
>WENV183593269
OOCZ01048397
144577
Bacillota
GAT
Ile
>WENV183593048
OOCZ01011016
238910
Bacillota
CTT
Lys
>WENV183593138
OOCZ01019890
338147
Bacillota
CTC
Glu
>WENV183592978
OOCZ01007625
338147
Bacillota
CTC
Glu
>WENV183593204
OOCZ01032567
235150
Bacillota
TGC
Ala
>WENV183593196
OOCZ01029756
155273
Bacillota
CAT
Met
>WENV183593150
OOCZ01020785
340802
Bacillota
TTG
Gln
>WENV183592934
OOCZ01006261
235114
Bacillota
TTT
Lys
>WENV183593177
OOCZ01025593
429429
Bacillota
CCA
Trp
>WENV183592988
OOCZ01007889
41154
Bacillota
TAA
Leu
>WENV183592989
OOCZ01007953
44859
Bacillota
AAG
Leu
>WENV183592827
OOCZ01003736
11034
Bacillota
GGA
Ser
>WENV183592676
OOCZ01001480
11034
Bacillota
GGA
Ser
>WENV183592580
OOCZ01000882
11034
Bacillota
GGA
Ser
>WENV183592403
OOCZ01000201
274189
Bacillota
TGT
Thr
>WENV183592692
OOCZ01001640
235079
Bacillota
GAA
Phe
>WENV183593268
OOCZ01048397
235087
Bacillota
TGC
Ala
>WENV183593176
OOCZ01025592
173314
Bacillota
GAT
Ile
>WENV183592968
OOCZ01007230
338149
Bacillota
CTC
Glu
>WENV183592719
OOCZ01001988
245298
Bacillota
CGG
Pro
>WENV183592965
OOCZ01007216
287000
Bacillota
GTT
Asn
>WENV183593276
OOCZ01052993
169968
Bacillota
CAT
Met
>WENV183593006
OOCZ01008727
235078
Bacillota
TAC
Val
>WENV183593109
OOCZ01015848
153911
Bacillota
GAT
Ile
>WENV183593149
OOCZ01020785
144610
Bacillota
GTG
His
>WENV183592816
OOCZ01003539
411547
Bacillota
CTG
Gln
>WENV183592554
OOCZ01000747
411547
Bacillota
CTG
Gln
>WENV183592438
OOCZ01000296
411547
Bacillota
CTG
Gln
>WENV183593157
OOCZ01022275
4624
Bacillota
GCT
Ser
>WENV183592516
OOCZ01000569
263765
Bacillota
TAC
Val
>WENV183592939
OOCZ01006489
412387
Bacillota
GCA
Cys
>WENV183592870
OOCZ01004674
235095
Bacillota
GGT
Thr
>WENV183592720
OOCZ01001992
235095
Bacillota
GGT
Thr
>WENV183592947
OOCZ01006778
411549
Bacillota
TTG
Gln
>WENV183592854
OOCZ01004441
411549
Bacillota
TTG
Gln
>WENV183592849
OOCZ01004347
411549
Bacillota
TTG
Gln
>WENV183592658
OOCZ01001333
411549
Bacillota
TTG
Gln
>WENV183592793
OOCZ01003114
148188
Bacillota
CCG
Arg
>WENV183592646
OOCZ01001252
148188
Bacillota
CCG
Arg
>WENV183592841
OOCZ01003989
80612
Bacillota
GTA
Tyr
>WENV183593191
OOCZ01028065
249522
Bacillota
TAC
Val
>WENV183593021
OOCZ01009511
235124
Bacillota
TGG
Pro
>WENV183592876
OOCZ01004793
235124
Bacillota
TGG
Pro
>WENV183592668
OOCZ01001383
235124
Bacillota
TGG
Pro
>WENV183592667
OOCZ01001383
235124
Bacillota
TGG
Pro
>WENV183592624
OOCZ01001075
338129
Bacillota
TGT
Thr
>WENV183592497
OOCZ01000446
338129
Bacillota
TGT
Thr
>WENV183592709
OOCZ01001837
157838
Bacillota
GTC
Asp
>WENV183593200
OOCZ01030610
144652
Bacillota
GTC
Asp
>WENV183592785
OOCZ01002944
247734
Bacillota
TGC
Ala
>WENV183592969
OOCZ01007230
144621
Bacillota
GTT
Asn
>WENV183592933
OOCZ01006261
235113
Bacillota
GAA
Phe
>WENV183592894
OOCZ01005358
58712
Bacillota
CAG
Leu
>WENV183592716
OOCZ01001937
58712
Bacillota
CAG
Leu
>WENV183592553
OOCZ01000744
58712
Bacillota
CAG
Leu
>WENV183593135
OOCZ01019507
245296
Bacillota
CCC
Gly
>WENV183592505
OOCZ01000513
272992
Bacillota
CTT
Lys
>WENV183592475
OOCZ01000382
344240
Bacillota
GCC
Gly
>WENV183592461
OOCZ01000355
344240
Bacillota
GCC
Gly
>WENV183592473
OOCZ01000382
196632
Bacillota
GTC
Asp
>WENV183592674
OOCZ01001426
144594
Bacillota
CAC
Val
>WENV183592365
OOCZ01000150
338127
Bacillota
TTG
Gln
>WENV183593053
OOCZ01011469
272488
Bacillota
GAA
Phe
>WENV183592946
OOCZ01006763
238945
Bacillota
GCC
Gly
>WENV183593101
OOCZ01015329
273862
Bacillota
TGC
Ala
>WENV183592722
OOCZ01002009
338128
Bacillota
TTC
Glu
>WENV183592357
OOCZ01000145
338128
Bacillota
TTC
Glu
>WENV183592474
OOCZ01000382
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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