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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183594737
OODC01000127
256380
Bacillota
>WENV183595356
OODC01010657
147684
Bacillota
ACG
Arg
>WENV183595429
OODC01022222
144583
Bacillota
ACG
Arg
>WENV183595198
OODC01003144
144583
Bacillota
ACG
Arg
>WENV183595080
OODC01001420
144583
Bacillota
ACG
Arg
>WENV183595269
OODC01005400
144594
Bacillota
CAC
Val
>WENV183595116
OODC01001938
144594
Bacillota
CAC
Val
>WENV183595090
OODC01001544
144594
Bacillota
CAC
Val
>WENV183595194
OODC01003066
59312
Bacillota
CAG
Leu
>WENV183595486
OODC01039749
58712
Bacillota
CAG
Leu
>WENV183595211
OODC01003510
58712
Bacillota
CAG
Leu
>WENV183595104
OODC01001833
58712
Bacillota
CAG
Leu
>WENV183595028
OODC01001083
58712
Bacillota
CAG
Leu
>WENV183594691
OODC01000083
155089
Bacillota
CAT
Met
>WENV183595207
OODC01003423
235171
Bacillota
CCA
Trp
>WENV183595276
OODC01005613
235171
Bacillota
CCA
Trp
>WENV183595095
OODC01001632
235171
Bacillota
CCA
Trp
>WENV183595247
OODC01004575
245296
Bacillota
CCC
Gly
>WENV183595063
OODC01001260
245296
Bacillota
CCC
Gly
>WENV183594854
OODC01000351
245296
Bacillota
CCC
Gly
>WENV183594607
OODC01000008
414486
Bacillota
CCC
Gly
>WENV183595358
OODC01010809
148188
Bacillota
CCG
Arg
>WENV183595256
OODC01004872
148188
Bacillota
CCG
Arg
>WENV183595233
OODC01004017
148188
Bacillota
CCG
Arg
>WENV183595042
OODC01001118
148188
Bacillota
CCG
Arg
>WENV183595217
OODC01003625
245298
Bacillota
CGG
Pro
>WENV183595018
OODC01001018
245298
Bacillota
CGG
Pro
>WENV183594998
OODC01000973
245298
Bacillota
CGG
Pro
>WENV183595405
OODC01017193
338149
Bacillota
CTC
Glu
>WENV183595399
OODC01015646
338149
Bacillota
CTC
Glu
>WENV183595387
OODC01014052
338149
Bacillota
CTC
Glu
>WENV183595315
OODC01007702
338149
Bacillota
CTC
Glu
>WENV183595253
OODC01004687
338149
Bacillota
CTC
Glu
>WENV183595149
OODC01002343
338149
Bacillota
CTC
Glu
>WENV183595216
OODC01003625
411547
Bacillota
CTG
Gln
>WENV183595118
OODC01001942
411547
Bacillota
CTG
Gln
>WENV183595021
OODC01001029
411547
Bacillota
CTG
Gln
>WENV183595017
OODC01001018
411547
Bacillota
CTG
Gln
>WENV183594997
OODC01000973
411547
Bacillota
CTG
Gln
>WENV183594863
OODC01000382
411547
Bacillota
CTG
Gln
>WENV183594834
OODC01000312
344183
Bacillota
CTG
Gln
>WENV183595411
OODC01018120
272992
Bacillota
CTT
Lys
>WENV183595400
OODC01015646
272992
Bacillota
CTT
Lys
>WENV183594910
OODC01000568
235134
Bacillota
GAA
Phe
>WENV183595472
OODC01032536
235079
Bacillota
GAA
Phe
>WENV183594958
OODC01000756
235079
Bacillota
GAA
Phe
>WENV183595056
OODC01001208
238974
Bacillota
GAA
Phe
>WENV183594799
OODC01000214
238974
Bacillota
GAA
Phe
>WENV183595106
OODC01001838
235098
Bacillota
GAC
Val
>WENV183595157
OODC01002519
235098
Bacillota
GAC
Val
>WENV183595245
OODC01004458
235098
Bacillota
GAC
Val
>WENV183595338
OODC01009639
235098
Bacillota
GAC
Val
>WENV183595476
OODC01037122
235098
Bacillota
GAC
Val
>WENV183595136
OODC01002178
238945
Bacillota
GCC
Gly
>WENV183595134
OODC01002178
238945
Bacillota
GCC
Gly
>WENV183595467
OODC01032139
249259
Bacillota
GCC
Gly
>WENV183595215
OODC01003600
249259
Bacillota
GCC
Gly
>WENV183595137
OODC01002192
249259
Bacillota
GCC
Gly
>WENV183594977
OODC01000872
249259
Bacillota
GCC
Gly
>WENV183594959
OODC01000756
249259
Bacillota
GCC
Gly
>WENV183595445
OODC01025813
338131
Bacillota
GCC
Gly
>WENV183595172
OODC01002667
338131
Bacillota
GCC
Gly
>WENV183595220
OODC01003642
4624
Bacillota
GCT
Ser
>WENV183595153
OODC01002361
4624
Bacillota
GCT
Ser
>WENV183595141
OODC01002262
18852
Bacillota
GCT
Ser
>WENV183595396
OODC01015335
11034
Bacillota
GGA
Ser
>WENV183594727
OODC01000117
11034
Bacillota
GGA
Ser
>WENV183595327
OODC01008748
152492
Bacillota
GGG
Pro
>WENV183595337
OODC01009369
235095
Bacillota
GGT
Thr
>WENV183595329
OODC01008926
235095
Bacillota
GGT
Thr
>WENV183595278
OODC01005613
235095
Bacillota
GGT
Thr
>WENV183595264
OODC01005166
235095
Bacillota
GGT
Thr
>WENV183595209
OODC01003423
235095
Bacillota
GGT
Thr
>WENV183595097
OODC01001632
235095
Bacillota
GGT
Thr
>WENV183595094
OODC01001632
235095
Bacillota
GGT
Thr
>WENV183595043
OODC01001123
235095
Bacillota
GGT
Thr
>WENV183594608
OODC01000010
100326
Bacillota
GTA
Tyr
>WENV183595431
OODC01022926
100326
Bacillota
GTA
Tyr
>WENV183594797
OODC01000214
100326
Bacillota
GTA
Tyr
>WENV183595357
OODC01010658
80612
Bacillota
GTA
Tyr
>WENV183595336
OODC01009369
182792
Bacillota
GTC
Asp
>WENV183595277
OODC01005613
182792
Bacillota
GTC
Asp
>WENV183595208
OODC01003423
182792
Bacillota
GTC
Asp
>WENV183595096
OODC01001632
182792
Bacillota
GTC
Asp
>WENV183595425
OODC01021618
149041
Bacillota
GTC
Asp
>WENV183595012
OODC01001013
149041
Bacillota
GTC
Asp
>WENV183595368
OODC01011774
156937
Bacillota
GTG
His
>WENV183595446
OODC01027801
144610
Bacillota
GTG
His
>WENV183595173
OODC01002714
144610
Bacillota
GTG
His
>WENV183595459
OODC01029626
235154
Bacillota
GTT
Asn
>WENV183594742
OODC01000135
235154
Bacillota
GTT
Asn
>WENV183595406
OODC01017193
144621
Bacillota
GTT
Asn
>WENV183595388
OODC01014052
144621
Bacillota
GTT
Asn
>WENV183595316
OODC01007702
144621
Bacillota
GTT
Asn
>WENV183595254
OODC01004687
144621
Bacillota
GTT
Asn
>WENV183595150
OODC01002343
144621
Bacillota
GTT
Asn
>WENV183595389
OODC01014062
23769
Bacillota
TAA
Leu
>WENV183595039
OODC01001115
267649
Bacillota
TAC
Val
>WENV183595360
OODC01010922
267649
Bacillota
TAC
Val
>WENV183595062
OODC01001250
235117
Bacillota
TAC
Val
>WENV183595176
OODC01002714
114075
Bacillota
TAG
Leu
>WENV183595005
OODC01001001
419877
Bacillota
TCC
Gly
>WENV183594886
OODC01000486
419877
Bacillota
TCC
Gly
>WENV183594765
OODC01000167
419877
Bacillota
TCC
Gly
>WENV183595484
OODC01039749
144612
Bacillota
TCT
Arg
>WENV183595342
OODC01009946
147674
Bacillota
TCT
Arg
>WENV183595386
OODC01013680
144672
Bacillota
TCT
Arg
>WENV183595219
OODC01003642
44854
Bacillota
TGA
Ser
>WENV183595152
OODC01002361
44854
Bacillota
TGA
Ser
>WENV183595435
OODC01025103
37269
Bacillota
TGA
Ser
>WENV183595350
OODC01010278
37269
Bacillota
TGA
Ser
>WENV183595279
OODC01005614
37269
Bacillota
TGA
Ser
>WENV183595212
OODC01003518
37269
Bacillota
TGA
Ser
>WENV183595203
OODC01003331
37269
Bacillota
TGA
Ser
>WENV183595367
OODC01011759
235137
Bacillota
TGC
Ala
>WENV183595365
OODC01011438
235124
Bacillota
TGG
Pro
>WENV183595349
OODC01010175
235124
Bacillota
TGG
Pro
>WENV183595115
OODC01001937
235124
Bacillota
TGG
Pro
>WENV183595010
OODC01001013
239832
Bacillota
TGT
Thr
>WENV183595313
OODC01007361
338129
Bacillota
TGT
Thr
>WENV183595144
OODC01002317
338129
Bacillota
TGT
Thr
>WENV183594982
OODC01000910
338129
Bacillota
TGT
Thr
>WENV183595409
OODC01018076
338152
Bacillota
TTC
Glu
>WENV183594969
OODC01000833
338440
Bacillota
TTC
Glu
>WENV183595074
OODC01001395
338128
Bacillota
TTC
Glu
>WENV183595447
OODC01027801
340802
Bacillota
TTG
Gln
>WENV183595339
OODC01009683
411549
Bacillota
TTG
Gln
>WENV183595055
OODC01001205
411549
Bacillota
TTG
Gln
>WENV183595027
OODC01001070
411549
Bacillota
TTG
Gln
>WENV183595016
OODC01001018
411549
Bacillota
TTG
Gln
>WENV183595345
OODC01009946
235127
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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