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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183643020
OQVO01000619
338147
Bacillota
CTC
Glu
>WENV183643039
OQVO01000851
148348
Bacillota
GTC
Asp
>WENV183643043
OQVO01000851
37437
Bacillota
TAA
Leu
>WENV183643040
OQVO01000851
286137
Bacillota
GAA
Phe
>WENV183643045
OQVO01000851
84171
Bacillota
GAG
Leu
>WENV183643049
OQVO01000870
58712
Bacillota
CAG
Leu
>WENV183643067
OQVO01001138
341796
Bacillota
CCG
Arg
>WENV183643084
OQVO01001312
344183
Bacillota
CTG
Gln
>WENV183643098
OQVO01001457
144621
Bacillota
GTT
Asn
>WENV183643116
OQVO01001651
240017
Bacillota
GCC
Gly
>WENV183643114
OQVO01001651
157838
Bacillota
GTC
Asp
>WENV183643131
OQVO01001964
235113
Bacillota
GAA
Phe
>WENV183643172
OQVO01002743
338128
Bacillota
TTC
Glu
>WENV183643205
OQVO01003441
235142
Bacillota
CTT
Lys
>WENV183643209
OQVO01003808
59312
Bacillota
CAG
Leu
>WENV183643218
OQVO01003967
235095
Bacillota
GGT
Thr
>WENV183643236
OQVO01004939
95563
Bacillota
GTA
Tyr
>WENV183643237
OQVO01004940
338149
Bacillota
CTC
Glu
>WENV183643238
OQVO01004940
272992
Bacillota
CTT
Lys
>WENV183643266
OQVO01005794
411549
Bacillota
TTG
Gln
>WENV183643281
OQVO01005909
155958
Bacillota
GAT
Ile
>WENV183643287
OQVO01006133
313104
Bacillota
TAC
Val
>WENV183643290
OQVO01006133
248965
Bacillota
GCC
Gly
>WENV183643296
OQVO01006370
235079
Bacillota
GAA
Phe
>WENV183643297
OQVO01006509
307003
Bacillota
TGC
Ala
>WENV183643299
OQVO01006546
148188
Bacillota
CCG
Arg
>WENV183643303
OQVO01006706
235124
Bacillota
TGG
Pro
>WENV183643319
OQVO01007486
144583
Bacillota
ACG
Arg
>WENV183643356
OQVO01008858
347851
Bacillota
TTC
Glu
>WENV183643386
OQVO01010715
338129
Bacillota
TGT
Thr
>WENV183643393
OQVO01011095
347827
Bacillota
TTC
Glu
>WENV183643399
OQVO01011698
144594
Bacillota
CAC
Val
>WENV183643431
OQVO01014538
413152
Bacillota
TCC
Gly
>WENV183643435
OQVO01014546
44854
Bacillota
TGA
Ser
>WENV183643436
OQVO01014546
4624
Bacillota
GCT
Ser
>WENV183643499
OQVO01023220
250201
Bacillota
TGC
Ala
>WENV183643501
OQVO01023221
163943
Bacillota
GTC
Asp
>WENV183643523
OQVO01025723
44859
Bacillota
AAG
Leu
>WENV183643526
OQVO01025975
313454
Bacillota
GAA
Phe
>WENV183643525
OQVO01025975
169968
Bacillota
CAT
Met
>WENV183643583
OQVO01033470
149041
Bacillota
GTC
Asp
>WENV183643590
OQVO01034567
429429
Bacillota
CCA
Trp
>WENV183643641
OQVO01044115
245298
Bacillota
CGG
Pro
>WENV183643640
OQVO01044115
411547
Bacillota
CTG
Gln
>WENV183643644
OQVO01044894
247057
Bacillota
TGC
Ala
>WENV183643654
OQVO01046735
313164
Bacillota
TTT
Lys
>WENV183643675
OQVO01051565
144612
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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