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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183656820
OQWI01000359
352996
Bacillota
TTC
Glu
>WENV183656856
OQWI01000502
248683
Bacillota
TTT
Lys
>WENV183656956
OQWI01001022
411549
Bacillota
TTG
Gln
>WENV183656986
OQWI01001319
236037
Bacillota
GTG
His
>WENV183656987
OQWI01001323
307003
Bacillota
TGC
Ala
>WENV183657016
OQWI01001476
178024
Bacillota
TCT
Arg
>WENV183657036
OQWI01001732
58712
Bacillota
CAG
Leu
>WENV183657071
OQWI01002161
298639
Bacillota
GTT
Asn
>WENV183657109
OQWI01002783
344240
Bacillota
GCC
Gly
>WENV183657107
OQWI01002783
196632
Bacillota
GTC
Asp
>WENV183657108
OQWI01002783
245344
Bacillota
GAA
Phe
>WENV183657132
OQWI01003122
144612
Bacillota
TCT
Arg
>WENV183657135
OQWI01003152
144594
Bacillota
CAC
Val
>WENV183657141
OQWI01003255
235078
Bacillota
TAC
Val
>WENV183657144
OQWI01003255
240017
Bacillota
GCC
Gly
>WENV183657147
OQWI01003263
338128
Bacillota
TTC
Glu
>WENV183657152
OQWI01003348
338128
Bacillota
TTC
Glu
>WENV183657159
OQWI01003578
338149
Bacillota
CTC
Glu
>WENV183657160
OQWI01003578
144621
Bacillota
GTT
Asn
>WENV183657163
OQWI01003636
235098
Bacillota
GAC
Val
>WENV183657169
OQWI01003712
245298
Bacillota
CGG
Pro
>WENV183657168
OQWI01003712
411547
Bacillota
CTG
Gln
>WENV183657174
OQWI01003853
411547
Bacillota
CTG
Gln
>WENV183657206
OQWI01004590
316443
Bacillota
GTC
Asp
>WENV183657207
OQWI01004590
254697
Bacillota
TTT
Lys
>WENV183657244
OQWI01005393
148188
Bacillota
CCG
Arg
>WENV183657245
OQWI01005395
245296
Bacillota
CCC
Gly
>WENV183657270
OQWI01005953
411549
Bacillota
TTG
Gln
>WENV183657292
OQWI01006381
313454
Bacillota
GAA
Phe
>WENV183657347
OQWI01008531
44854
Bacillota
TGA
Ser
>WENV183657348
OQWI01008531
4624
Bacillota
GCT
Ser
>WENV183657353
OQWI01008771
338152
Bacillota
TTC
Glu
>WENV183657352
OQWI01008771
287000
Bacillota
GTT
Asn
>WENV183657357
OQWI01008969
80612
Bacillota
GTA
Tyr
>WENV183657364
OQWI01009285
58712
Bacillota
CAG
Leu
>WENV183657365
OQWI01009338
147684
Bacillota
ACG
Arg
>WENV183657367
OQWI01009370
304022
Bacillota
GCC
Gly
>WENV183657366
OQWI01009370
235079
Bacillota
GAA
Phe
>WENV183657389
OQWI01009969
235124
Bacillota
TGG
Pro
>WENV183657399
OQWI01010123
340802
Bacillota
TTG
Gln
>WENV183657398
OQWI01010123
144610
Bacillota
GTG
His
>WENV183657397
OQWI01010123
157635
Bacillota
TCT
Arg
>WENV183657428
OQWI01011352
411549
Bacillota
TTG
Gln
>WENV183657432
OQWI01011532
299139
Bacillota
TGC
Ala
>WENV183657467
OQWI01013134
236037
Bacillota
GTG
His
>WENV183657468
OQWI01013263
235098
Bacillota
GAC
Val
>WENV183657481
OQWI01013410
144594
Bacillota
CAC
Val
>WENV183657492
OQWI01013918
173314
Bacillota
GAT
Ile
>WENV183657491
OQWI01013918
299139
Bacillota
TGC
Ala
>WENV183657496
OQWI01014109
41154
Bacillota
TAA
Leu
>WENV183657502
OQWI01014378
235098
Bacillota
GAC
Val
>WENV183657563
OQWI01018538
298620
Bacillota
CAT
Met
>WENV183657597
OQWI01021233
249522
Bacillota
TAC
Val
>WENV183657615
OQWI01023253
58712
Bacillota
CAG
Leu
>WENV183657621
OQWI01023510
11034
Bacillota
GGA
Ser
>WENV183657663
OQWI01026827
44854
Bacillota
TGA
Ser
>WENV183657664
OQWI01026827
4624
Bacillota
GCT
Ser
>WENV183657679
OQWI01028236
202812
Bacillota
CAT
Met
>WENV183657683
OQWI01028362
429429
Bacillota
CCA
Trp
>WENV183657719
OQWI01032631
243098
Bacillota
GGT
Thr
>WENV183657779
OQWI01040751
144583
Bacillota
ACG
Arg
>WENV183657782
OQWI01040787
429443
Bacillota
GCA
Cys
>WENV183657791
OQWI01042704
152492
Bacillota
GGG
Pro
>WENV183657843
OQWI01051022
279755
Bacillota
GTC
Asp
>WENV183657845
OQWI01051022
45160
Bacillota
CAA
Leu
>WENV183657870
OQWI01057065
237265
Bacillota
TAC
Val
>WENV183657871
OQWI01057065
240190
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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