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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183551628
OOBJ01000009
146762
Bacteroidota
TGG
Pro
>WENV183551627
OOBJ01000009
412236
Bacteroidota
CCC
Gly
>WENV183551655
OOBJ01000015
415558
Bacteroidota
TTG
Gln
>WENV183551662
OOBJ01000017
313363
Bacteroidota
GAA
Phe
>WENV183551681
OOBJ01000027
141635
Bacteroidota
TAC
Val
>WENV183551682
OOBJ01000027
141635
Bacteroidota
TAC
Val
>WENV183551735
OOBJ01000038
95987
Bacteroidota
CAA
Leu
>WENV183551797
OOBJ01000072
193809
Bacteroidota
CAT
Met
>WENV183551803
OOBJ01000075
263771
Bacteroidota
CTT
Lys
>WENV183551815
OOBJ01000090
313363
Bacteroidota
GAA
Phe
>WENV183551846
OOBJ01000124
144695
Bacteroidota
CAT
Met
>WENV183551847
OOBJ01000126
193809
Bacteroidota
CAT
Met
>WENV183551858
OOBJ01000136
353927
Bacteroidota
TTC
Glu
>WENV183551857
OOBJ01000136
353927
Bacteroidota
TTC
Glu
>WENV183551873
OOBJ01000149
44852
Bacteroidota
TAA
Leu
>WENV183551883
OOBJ01000171
146762
Bacteroidota
TGG
Pro
>WENV183551901
OOBJ01000226
412479
Bacteroidota
TTG
Gln
>WENV183551899
OOBJ01000226
37076
Bacteroidota
TAA
Leu
>WENV183551907
OOBJ01000234
235097
Bacteroidota
TTT
Lys
>WENV183551912
OOBJ01000254
237796
Bacteroidota
CGT
Thr
>WENV183551917
OOBJ01000262
155123
Bacteroidota
GTT
Asn
>WENV183551931
OOBJ01000274
235097
Bacteroidota
TTT
Lys
>WENV183551946
OOBJ01000296
141635
Bacteroidota
TAC
Val
>WENV183551963
OOBJ01000312
146764
Bacteroidota
GTC
Asp
>WENV183551962
OOBJ01000312
146764
Bacteroidota
GTC
Asp
>WENV183551960
OOBJ01000312
59498
Bacteroidota
GAG
Leu
>WENV183551965
OOBJ01000313
80607
Bacteroidota
GTA
Tyr
>WENV183551975
OOBJ01000331
94703
Bacteroidota
GTA
Tyr
>WENV183551981
OOBJ01000347
301449
Bacteroidota
CGG
Pro
>WENV183551984
OOBJ01000349
37076
Bacteroidota
TAA
Leu
>WENV183551986
OOBJ01000368
56823
Bacteroidota
TGA
Ser
>WENV183551988
OOBJ01000370
235207
Bacteroidota
CAT
Met
>WENV183551990
OOBJ01000381
419272
Bacteroidota
CTG
Gln
>WENV183551993
OOBJ01000396
436206
Bacteroidota
TTG
Gln
>WENV183551996
OOBJ01000402
16220
Bacteroidota
GGA
Ser
>WENV183552002
OOBJ01000426
147147
Bacteroidota
GTG
His
>WENV183552001
OOBJ01000426
147147
Bacteroidota
GTG
His
>WENV183552004
OOBJ01000440
143169
Bacteroidota
GGG
Pro
>WENV183552023
OOBJ01000486
144695
Bacteroidota
CAT
Met
>WENV183552052
OOBJ01000551
95987
Bacteroidota
CAA
Leu
>WENV183552060
OOBJ01000599
37076
Bacteroidota
TAA
Leu
>WENV183552063
OOBJ01000611
94703
Bacteroidota
GTA
Tyr
>WENV183552082
OOBJ01000707
338132
Bacteroidota
GCA
Cys
>WENV183552090
OOBJ01000722
344769
Bacteroidota
CTC
Glu
>WENV183552092
OOBJ01000737
425638
Bacteroidota
CTG
Gln
>WENV183552102
OOBJ01000785
147147
Bacteroidota
GTG
His
>WENV183552130
OOBJ01000979
37076
Bacteroidota
TAA
Leu
>WENV183552143
OOBJ01001029
80607
Bacteroidota
GTA
Tyr
>WENV183552151
OOBJ01001070
267954
Bacteroidota
GCC
Gly
>WENV183552170
OOBJ01001182
37076
Bacteroidota
TAA
Leu
>WENV183552184
OOBJ01001294
143169
Bacteroidota
GGG
Pro
>WENV183552187
OOBJ01001331
313363
Bacteroidota
GAA
Phe
>WENV183552192
OOBJ01001353
313363
Bacteroidota
GAA
Phe
>WENV183552194
OOBJ01001383
23696
Bacteroidota
GCT
Ser
>WENV183552203
OOBJ01001465
16224
Bacteroidota
GGA
Ser
>WENV183552207
OOBJ01001480
19528
Bacteroidota
GGA
Ser
>WENV183552208
OOBJ01001483
415558
Bacteroidota
TTG
Gln
>WENV183552220
OOBJ01001666
95987
Bacteroidota
CAA
Leu
>WENV183552225
OOBJ01001689
95559
Bacteroidota
TAG
Leu
>WENV183552229
OOBJ01001706
141635
Bacteroidota
TAC
Val
>WENV183552235
OOBJ01001824
59689
Bacteroidota
CAG
Leu
>WENV183552242
OOBJ01001869
338125
Bacteroidota
CCT
Arg
>WENV183552244
OOBJ01001886
313363
Bacteroidota
GAA
Phe
>WENV183552249
OOBJ01001921
436206
Bacteroidota
TTG
Gln
>WENV183552283
OOBJ01002186
338164
Bacteroidota
TTC
Glu
>WENV183552306
OOBJ01002545
144596
Bacteroidota
GGC
Ala
>WENV183552311
OOBJ01002598
95987
Bacteroidota
CAA
Leu
>WENV183552330
OOBJ01002801
313363
Bacteroidota
GAA
Phe
>WENV183552334
OOBJ01002820
425638
Bacteroidota
CTG
Gln
>WENV183552337
OOBJ01002934
56823
Bacteroidota
TGA
Ser
>WENV183552354
OOBJ01003497
16999
Bacteroidota
GGA
Ser
>WENV183552355
OOBJ01003567
147148
Bacteroidota
CAT
Met
>WENV183552358
OOBJ01003613
95875
Bacteroidota
TAG
Leu
>WENV183552390
OOBJ01004304
338125
Bacteroidota
CCT
Arg
>WENV183552399
OOBJ01004343
412479
Bacteroidota
TTG
Gln
>WENV183552403
OOBJ01004573
411550
Bacteroidota
CTG
Gln
>WENV183552406
OOBJ01004680
240012
Bacteroidota
CCC
Gly
>WENV183552409
OOBJ01004768
235102
Bacteroidota
CGT
Thr
>WENV183552425
OOBJ01005440
144655
Bacteroidota
GGC
Ala
>WENV183552437
OOBJ01005941
46489
Bacteroidota
TGA
Ser
>WENV183552448
OOBJ01006508
45423
Bacteroidota
TGA
Ser
>WENV183552462
OOBJ01007238
338124
Bacteroidota
CCG
Arg
>WENV183552496
OOBJ01008354
58715
Bacteroidota
GAG
Leu
>WENV183552504
OOBJ01008690
338486
Bacteroidota
CAT
Met
>WENV183552510
OOBJ01008964
20893
Bacteroidota
GGA
Ser
>WENV183552566
OOBJ01012466
126965
Bacteroidota
GGG
Pro
>WENV183552604
OOBJ01015574
144656
Bacteroidota
GTG
His
>WENV183552704
OOBJ01025295
80614
Bacteroidota
>WENV183552735
OOBJ01029587
144657
Bacteroidota
CGG
Pro
>WENV183552779
OOBJ01037864
126966
Bacteroidota
TAC
Val
>WENV183552797
OOBJ01046523
235129
Bacteroidota
GCC
Gly
>WENV183552815
OOBJ01057201
415558
Bacteroidota
TTG
Gln
>WENV183552837
OOBJ01064344
280660
Bacteroidota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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