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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180031865
FTJU01000135
454933
Actinomycetota
ACG
Arg
>WENV180031881
FTJU01000445
455983
Actinomycetota
CCG
Arg
>WENV180031868
FTJU01000174
180277
Actinomycetota
TAG
Leu
>WENV180032132
FTJU01243433
281435
Actinomycetota
GGG
Pro
>WENV180031864
FTJU01000135
45898
Actinomycetota
GCT
Ser
>WENV180031947
FTJU01001894
45898
Actinomycetota
GCT
Ser
>WENV180031974
FTJU01002239
654699
Actinomycetota
TGT
Thr
>WENV180031905
FTJU01000972
463210
Actinomycetota
CCT
Arg
>WENV180031906
FTJU01000972
463210
Actinomycetota
CCT
Arg
>WENV180032053
FTJU01024385
452134
Actinomycetota
CTC
Glu
>WENV180032008
FTJU01005929
453964
Actinomycetota
GCC
Gly
>WENV180032125
FTJU01243402
453964
Actinomycetota
GCC
Gly
>WENV180032122
FTJU01243372
86928
Actinomycetota
GGA
Ser
>WENV180032025
FTJU01010387
451707
Actinomycetota
CCT
Arg
>WENV180032039
FTJU01017203
465576
Actinomycetota
GTG
His
>WENV180031935
FTJU01001749
30344
Actinomycetota
CGA
Ser
>WENV180031896
FTJU01000729
780000
Actinomycetota
TCC
Gly
>WENV180031977
FTJU01002297
780000
Actinomycetota
TCC
Gly
>WENV180031925
FTJU01001570
780002
Actinomycetota
TTG
Gln
>WENV180031869
FTJU01000178
455982
Actinomycetota
CGT
Thr
>WENV180031910
FTJU01001082
455982
Actinomycetota
CGT
Thr
>WENV180032001
FTJU01004837
455982
Actinomycetota
CGT
Thr
>WENV180032126
FTJU01243407
452207
Actinomycetota
TTT
Lys
>WENV180031879
FTJU01000398
452211
Actinomycetota
CGC
Ala
>WENV180031928
FTJU01001620
453963
Actinomycetota
GTT
Asn
>WENV180032013
FTJU01007898
453963
Actinomycetota
GTT
Asn
>WENV180031983
FTJU01002312
453966
Actinomycetota
CAT
Met
>WENV180032016
FTJU01008421
271157
Actinomycetota
TCT
Arg
>WENV180031995
FTJU01003762
453962
Actinomycetota
GTG
His
>WENV180031878
FTJU01000372
30443
Actinomycetota
CGA
Ser
>WENV180031986
FTJU01002502
281592
Actinomycetota
CAT
Met
>WENV180031993
FTJU01003247
780474
Actinomycetota
CCC
Gly
>WENV180031897
FTJU01000737
653983
Actinomycetota
TGT
Thr
>WENV180031981
FTJU01002312
153934
Actinomycetota
GTA
Tyr
>WENV180031984
FTJU01002312
452215
Actinomycetota
CCA
Trp
>WENV180031978
FTJU01002297
271374
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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