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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170018696
BBPD01000414
146578
Alphaproteobacteria
CGG
Pro
>WENV170018802
BBPD01001087
146578
Alphaproteobacteria
CGG
Pro
>WENV170018806
BBPD01001100
338269
Alphaproteobacteria
GTT
Asn
>WENV170018850
BBPD01001481
164887
Alphaproteobacteria
CCA
Trp
>WENV170019622
BBPD01026183
339325
Alphaproteobacteria
CAC
Val
>WENV170018568
BBPD01000013
294221
Alphaproteobacteria
GAA
Phe
>WENV170018657
BBPD01000271
182651
Alphaproteobacteria
GTC
Asp
>WENV170018595
BBPD01000103
251610
Alphaproteobacteria
TGC
Ala
>WENV170019425
BBPD01012053
338289
Alphaproteobacteria
GAC
Val
>WENV170019251
BBPD01006711
283763
Alphaproteobacteria
TGC
Ala
>WENV170018807
BBPD01001115
294226
Alphaproteobacteria
>WENV170019074
BBPD01003633
148845
Alphaproteobacteria
GGG
Pro
>WENV170018583
BBPD01000042
148845
Alphaproteobacteria
GGG
Pro
>WENV170018638
BBPD01000205
257056
Alphaproteobacteria
CGT
Thr
>WENV170018580
BBPD01000033
339306
Alphaproteobacteria
>WENV170018978
BBPD01002727
366499
Alphaproteobacteria
GGT
Thr
>WENV170018736
BBPD01000603
366499
Alphaproteobacteria
GGT
Thr
>WENV170018578
BBPD01000031
174413
Alphaproteobacteria
CAT
Met
>WENV170019075
BBPD01003645
418532
Alphaproteobacteria
CTG
Gln
>WENV170018562
BBPD01000006
145341
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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