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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170568705
FLMP01068298
260895
Bacteroidota
TTG
Gln
>WENV170568362
FLMP01032833
325201
Bacteroidota
>WENV170568971
FLMP01103842
117444
Bacteroidota
GTA
Tyr
>WENV170568280
FLMP01026949
257688
Bacteroidota
>WENV170568699
FLMP01067721
257688
Bacteroidota
>WENV170567400
FLMP01000307
165596
Bacteroidota
GGC
Ala
>WENV170570286
FLMP01499744
165596
Bacteroidota
GGC
Ala
>WENV170568764
FLMP01075888
262623
Bacteroidota
TCC
Gly
>WENV170569170
FLMP01139615
189987
Bacteroidota
TCT
Arg
>WENV170567954
FLMP01011040
109317
Bacteroidota
CAA
Leu
>WENV170569778
FLMP01299867
258741
Bacteroidota
TCC
Gly
>WENV170568721
FLMP01070465
369213
Bacteroidota
GCC
Gly
>WENV170567916
FLMP01009976
160350
Bacteroidota
CAT
Met
>WENV170567956
FLMP01011056
314601
Bacteroidota
>WENV170569923
FLMP01355006
314601
Bacteroidota
>WENV170568758
FLMP01075602
266737
Bacteroidota
TTT
Lys
>WENV170568681
FLMP01065088
139505
Bacteroidota
TAC
Val
>WENV170568825
FLMP01084343
139505
Bacteroidota
TAC
Val
>WENV170569738
FLMP01287165
258742
Bacteroidota
TTT
Lys
>WENV170568759
FLMP01075602
64800
Bacteroidota
GAG
Leu
>WENV170569007
FLMP01107149
159104
Bacteroidota
>WENV170570148
FLMP01437069
188934
Bacteroidota
>WENV170569227
FLMP01151554
171792
Bacteroidota
GTG
His
>WENV170568666
FLMP01062290
89591
Bacteroidota
GAG
Leu
>WENV170568643
FLMP01059291
57357
Bacteroidota
TGA
Ser
>WENV170568138
FLMP01019086
166467
Bacteroidota
>WENV170569357
FLMP01178450
448470
Bacteroidota
GCA
Cys
>WENV170568193
FLMP01021576
311209
Bacteroidota
TTG
Gln
>WENV170567946
FLMP01010662
258133
Bacteroidota
>WENV170568484
FLMP01044045
258133
Bacteroidota
>WENV170567997
FLMP01012519
385890
Bacteroidota
TTC
Glu
>WENV170570250
FLMP01485707
310696
Bacteroidota
CCA
Trp
>WENV170568594
FLMP01053873
153255
Bacteroidota
TGG
Pro
>WENV170568719
FLMP01069856
153255
Bacteroidota
TGG
Pro
>WENV170569168
FLMP01139615
153255
Bacteroidota
TGG
Pro
>WENV170569169
FLMP01139615
153255
Bacteroidota
TGG
Pro
>WENV170569333
FLMP01172333
153255
Bacteroidota
TGG
Pro
>WENV170567635
FLMP01002787
240266
Bacteroidota
TGC
Ala
>WENV170568351
FLMP01031792
391466
Bacteroidota
GGT
Thr
>WENV170568809
FLMP01082033
177164
Bacteroidota
GTC
Asp
>WENV170569193
FLMP01143288
171098
Bacteroidota
>WENV170567592
FLMP01002186
223232
Bacteroidota
>WENV170569496
FLMP01218357
223232
Bacteroidota
>WENV170567623
FLMP01002667
139057
Bacteroidota
GAC
Val
>WENV170569240
FLMP01155375
138967
Bacteroidota
TGG
Pro
>WENV170569798
FLMP01306271
138967
Bacteroidota
TGG
Pro
>WENV170570173
FLMP01448636
138967
Bacteroidota
TGG
Pro
>WENV170567508
FLMP01001250
152262
Bacteroidota
TAC
Val
>WENV170569207
FLMP01147439
51032
Bacteroidota
TGA
Ser
>WENV170569790
FLMP01304644
149778
Bacteroidota
TAC
Val
>WENV170569002
FLMP01106808
119207
Bacteroidota
TAG
Leu
>WENV170570317
FLMP01517275
119207
Bacteroidota
TAG
Leu
>WENV170568299
FLMP01028134
144149
Bacteroidota
TGG
Pro
>WENV170568553
FLMP01049558
263162
Bacteroidota
GGG
Pro
>WENV170569823
FLMP01317900
372822
Bacteroidota
GCC
Gly
>WENV170568937
FLMP01099961
321470
Bacteroidota
GAA
Phe
>WENV170569273
FLMP01161471
321470
Bacteroidota
GAA
Phe
>WENV170568546
FLMP01048952
373542
Bacteroidota
GGT
Thr
>WENV170568892
FLMP01093341
221495
Bacteroidota
TGG
Pro
>WENV170567449
FLMP01000592
205559
Bacteroidota
TCT
Arg
>WENV170569625
FLMP01252782
205559
Bacteroidota
TCT
Arg
>WENV170569799
FLMP01306271
205559
Bacteroidota
TCT
Arg
>WENV170569346
FLMP01175635
369841
Bacteroidota
>WENV170569167
FLMP01139615
71400
Bacteroidota
GCT
Ser
>WENV170569314
FLMP01166300
71400
Bacteroidota
GCT
Ser
>WENV170569797
FLMP01306271
71400
Bacteroidota
GCT
Ser
>WENV170570244
FLMP01482833
410435
Bacteroidota
TTC
Glu
>WENV170568390
FLMP01035543
412268
Bacteroidota
CCA
Trp
>WENV170568771
FLMP01076397
412268
Bacteroidota
CCA
Trp
>WENV170568762
FLMP01075888
232558
Bacteroidota
TGT
Thr
>WENV170569052
FLMP01114413
178382
Bacteroidota
TGC
Ala
>WENV170567925
FLMP01010352
310118
Bacteroidota
CCA
Trp
>WENV170568259
FLMP01025680
310118
Bacteroidota
CCA
Trp
>WENV170568281
FLMP01027130
310118
Bacteroidota
CCA
Trp
>WENV170569472
FLMP01212151
66584
Bacteroidota
GCT
Ser
>WENV170567728
FLMP01004438
160456
Bacteroidota
GAT
Ile
>WENV170567710
FLMP01004030
259269
Bacteroidota
GAA
Phe
>WENV170567702
FLMP01003895
452385
Bacteroidota
GCA
Cys
>WENV170568312
FLMP01029410
149057
Bacteroidota
TAC
Val
>WENV170569034
FLMP01111673
369215
Bacteroidota
TTC
Glu
>WENV170567734
FLMP01004564
106563
Bacteroidota
CAA
Leu
>WENV170570145
FLMP01435392
106563
Bacteroidota
CAA
Leu
>WENV170567668
FLMP01003340
158985
Bacteroidota
GTC
Asp
>WENV170568290
FLMP01027890
179763
Bacteroidota
GTG
His
>WENV170567582
FLMP01002065
139231
Bacteroidota
GAC
Val
>WENV170569956
FLMP01365307
106741
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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