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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170567719
FLMP01004202
245770
Gammaproteobacteria
TTT
Lys
>WENV170568381
FLMP01034776
245770
Gammaproteobacteria
TTT
Lys
>WENV170570026
FLMP01394967
245770
Gammaproteobacteria
TTT
Lys
>WENV170567640
FLMP01002835
312287
Gammaproteobacteria
TGT
Thr
>WENV170569676
FLMP01267600
184388
Gammaproteobacteria
GAT
Ile
>WENV170568770
FLMP01076310
149065
Gammaproteobacteria
CCA
Trp
>WENV170568443
FLMP01040359
158396
Gammaproteobacteria
ACG
Arg
>WENV170569679
FLMP01267979
158396
Gammaproteobacteria
ACG
Arg
>WENV170568159
FLMP01020032
115067
Gammaproteobacteria
GTA
Tyr
>WENV170568992
FLMP01106237
115067
Gammaproteobacteria
GTA
Tyr
>WENV170568978
FLMP01104541
145489
Gammaproteobacteria
GAT
Ile
>WENV170569785
FLMP01302710
17426
Gammaproteobacteria
GCT
Ser
>WENV170567480
FLMP01000876
17426
Gammaproteobacteria
GCT
Ser
>WENV170569068
FLMP01117234
149578
Gammaproteobacteria
ACG
Arg
>WENV170568289
FLMP01027794
149578
Gammaproteobacteria
ACG
Arg
>WENV170568261
FLMP01025717
149578
Gammaproteobacteria
ACG
Arg
>WENV170567520
FLMP01001505
149578
Gammaproteobacteria
ACG
Arg
>WENV170568717
FLMP01069642
236366
Gammaproteobacteria
GTG
His
>WENV170567408
FLMP01000359
153865
Gammaproteobacteria
CCG
Arg
>WENV170570084
FLMP01413350
240619
Gammaproteobacteria
TGT
Thr
>WENV170569952
FLMP01364184
59155
Gammaproteobacteria
TAA
Leu
>WENV170569950
FLMP01364184
59155
Gammaproteobacteria
TAA
Leu
>WENV170567685
FLMP01003600
199268
Gammaproteobacteria
ACG
Arg
>WENV170570202
FLMP01463142
309581
Gammaproteobacteria
GAA
Phe
>WENV170568022
FLMP01013324
292565
Gammaproteobacteria
TTC
Glu
>WENV170567751
FLMP01004724
292565
Gammaproteobacteria
TTC
Glu
>WENV170570361
FLMP01540102
147057
Gammaproteobacteria
GAC
Val
>WENV170567830
FLMP01006500
247974
Gammaproteobacteria
CCA
Trp
>WENV170570342
FLMP01532730
294663
Gammaproteobacteria
TTC
Glu
>WENV170569004
FLMP01106903
294663
Gammaproteobacteria
TTC
Glu
>WENV170568241
FLMP01024475
294663
Gammaproteobacteria
TTC
Glu
>WENV170567982
FLMP01011725
294663
Gammaproteobacteria
TTC
Glu
>WENV170567884
FLMP01008631
294663
Gammaproteobacteria
TTC
Glu
>WENV170569951
FLMP01364184
237708
Gammaproteobacteria
GCC
Gly
>WENV170568979
FLMP01104541
236029
Gammaproteobacteria
TGC
Ala
>WENV170568523
FLMP01046899
412476
Gammaproteobacteria
TCC
Gly
>WENV170569400
FLMP01197444
319098
Gammaproteobacteria
TAC
Val
>WENV170567706
FLMP01003977
319098
Gammaproteobacteria
TAC
Val
>WENV170569463
FLMP01210339
147051
Gammaproteobacteria
CAT
Met
>WENV170570070
FLMP01408792
145713
Gammaproteobacteria
CAT
Met
>WENV170569714
FLMP01278081
145713
Gammaproteobacteria
CAT
Met
>WENV170567872
FLMP01008370
145713
Gammaproteobacteria
CAT
Met
>WENV170569723
FLMP01280601
411842
Gammaproteobacteria
GCA
Cys
>WENV170567544
FLMP01001699
411842
Gammaproteobacteria
GCA
Cys
>WENV170570287
FLMP01500404
250885
Gammaproteobacteria
TGC
Ala
>WENV170570352
FLMP01536189
237712
Gammaproteobacteria
TGT
Thr
>WENV170570008
FLMP01388267
154796
Gammaproteobacteria
TCT
Arg
>WENV170569856
FLMP01330548
243485
Gammaproteobacteria
TGT
Thr
>WENV170569949
FLMP01364184
412217
Gammaproteobacteria
GCA
Cys
>WENV170567877
FLMP01008506
149661
Gammaproteobacteria
CAT
Met
>WENV170568168
FLMP01020580
237421
Gammaproteobacteria
TGT
Thr
>WENV170567461
FLMP01000653
237421
Gammaproteobacteria
TGT
Thr
>WENV170567372
FLMP01000154
237421
Gammaproteobacteria
TGT
Thr
>WENV170570347
FLMP01534389
237421
Gammaproteobacteria
TGT
Thr
>WENV170568263
FLMP01026148
237421
Gammaproteobacteria
TGT
Thr
>WENV170570353
FLMP01536362
237713
Gammaproteobacteria
TAC
Val
>WENV170567608
FLMP01002497
16840
Gammaproteobacteria
GGA
Ser
>WENV170567529
FLMP01001558
16840
Gammaproteobacteria
GGA
Ser
>WENV170567339
FLMP01000038
16840
Gammaproteobacteria
GGA
Ser
>WENV170569575
FLMP01235512
245151
Gammaproteobacteria
GTG
His
>WENV170567370
FLMP01000151
245151
Gammaproteobacteria
GTG
His
>WENV170567443
FLMP01000573
240536
Gammaproteobacteria
TTT
Lys
>WENV170567442
FLMP01000573
240536
Gammaproteobacteria
TTT
Lys
>WENV170567602
FLMP01002340
288517
Gammaproteobacteria
TGT
Thr
>WENV170567577
FLMP01002028
288517
Gammaproteobacteria
TGT
Thr
>WENV170568703
FLMP01068000
147117
Gammaproteobacteria
GTC
Asp
>WENV170570146
FLMP01435567
96080
Gammaproteobacteria
CAA
Leu
>WENV170569982
FLMP01374564
198797
Gammaproteobacteria
TGG
Pro
>WENV170569542
FLMP01227349
198797
Gammaproteobacteria
TGG
Pro
>WENV170569349
FLMP01176683
198797
Gammaproteobacteria
TGG
Pro
>WENV170568938
FLMP01100121
198797
Gammaproteobacteria
TGG
Pro
>WENV170568613
FLMP01055438
198797
Gammaproteobacteria
TGG
Pro
>WENV170567994
FLMP01012451
198797
Gammaproteobacteria
TGG
Pro
>WENV170567681
FLMP01003525
198797
Gammaproteobacteria
TGG
Pro
>WENV170567626
FLMP01002715
198797
Gammaproteobacteria
TGG
Pro
>WENV170570222
FLMP01472551
198797
Gammaproteobacteria
TGG
Pro
>WENV170570110
FLMP01425131
198797
Gammaproteobacteria
TGG
Pro
>WENV170569722
FLMP01280601
270352
Gammaproteobacteria
GCC
Gly
>WENV170567543
FLMP01001699
270352
Gammaproteobacteria
GCC
Gly
>WENV170569663
FLMP01265415
190809
Gammaproteobacteria
GGG
Pro
>WENV170568313
FLMP01029529
190809
Gammaproteobacteria
GGG
Pro
>WENV170570351
FLMP01536189
237711
Gammaproteobacteria
GAA
Phe
>WENV170570205
FLMP01464406
237711
Gammaproteobacteria
GAA
Phe
>WENV170569544
FLMP01227350
175414
Gammaproteobacteria
TCT
Arg
>WENV170570288
FLMP01501779
273942
Gammaproteobacteria
GCC
Gly
>WENV170567875
FLMP01008473
273942
Gammaproteobacteria
GCC
Gly
>WENV170569948
FLMP01364106
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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