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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170569675
FLMP01267482
448974
Gammaproteobacteria
GCA
Cys
>WENV170570205
FLMP01464406
259745
Gammaproteobacteria
GAA
Phe
>WENV170570351
FLMP01536189
259745
Gammaproteobacteria
GAA
Phe
>WENV170567384
FLMP01000180
67462
Gammaproteobacteria
CAA
Leu
>WENV170569951
FLMP01364184
325913
Gammaproteobacteria
GCC
Gly
>WENV170568804
FLMP01080727
179832
Gammaproteobacteria
>WENV170570203
FLMP01463278
18787
Gammaproteobacteria
GGA
Ser
>WENV170569351
FLMP01176683
265552
Gammaproteobacteria
GTG
His
>WENV170568443
FLMP01040359
190005
Gammaproteobacteria
ACG
Arg
>WENV170569679
FLMP01267979
190005
Gammaproteobacteria
ACG
Arg
>WENV170567782
FLMP01005511
165559
Gammaproteobacteria
TCT
Arg
>WENV170568994
FLMP01106434
165559
Gammaproteobacteria
TCT
Arg
>WENV170567321
FLMP01000015
161515
Gammaproteobacteria
CCG
Arg
>WENV170568470
FLMP01042677
161515
Gammaproteobacteria
CCG
Arg
>WENV170569485
FLMP01215200
262285
Gammaproteobacteria
TGC
Ala
>WENV170569950
FLMP01364184
65199
Gammaproteobacteria
TAA
Leu
>WENV170569952
FLMP01364184
65199
Gammaproteobacteria
TAA
Leu
>WENV170568003
FLMP01012851
23501
Gammaproteobacteria
GCT
Ser
>WENV170569111
FLMP01124985
26937
Gammaproteobacteria
TGA
Ser
>WENV170567590
FLMP01002140
206655
Gammaproteobacteria
GTC
Asp
>WENV170568519
FLMP01046611
206655
Gammaproteobacteria
GTC
Asp
>WENV170568794
FLMP01079810
206655
Gammaproteobacteria
GTC
Asp
>WENV170568022
FLMP01013324
310117
Gammaproteobacteria
TTC
Glu
>WENV170570353
FLMP01536362
259744
Gammaproteobacteria
TAC
Val
>WENV170568074
FLMP01015599
65736
Gammaproteobacteria
TAA
Leu
>WENV170567872
FLMP01008370
229608
Gammaproteobacteria
CAT
Met
>WENV170569714
FLMP01278081
229608
Gammaproteobacteria
CAT
Met
>WENV170570070
FLMP01408792
229608
Gammaproteobacteria
CAT
Met
>WENV170569463
FLMP01210339
158349
Gammaproteobacteria
>WENV170567322
FLMP01000018
260453
Gammaproteobacteria
GTT
Asn
>WENV170567323
FLMP01000018
260453
Gammaproteobacteria
GTT
Asn
>WENV170569629
FLMP01253599
260453
Gammaproteobacteria
GTT
Asn
>WENV170568356
FLMP01032628
257697
Gammaproteobacteria
GTG
His
>WENV170570352
FLMP01536189
259747
Gammaproteobacteria
TGT
Thr
>WENV170567374
FLMP01000154
448815
Gammaproteobacteria
TCC
Gly
>WENV170569676
FLMP01267600
179833
Gammaproteobacteria
GAT
Ile
>WENV170569947
FLMP01364106
448049
Gammaproteobacteria
GCA
Cys
>WENV170569697
FLMP01272624
161327
Gammaproteobacteria
ACG
Arg
>WENV170569949
FLMP01364184
451514
Gammaproteobacteria
GCA
Cys
>WENV170569565
FLMP01233068
169863
Gammaproteobacteria
GGG
Pro
>WENV170567375
FLMP01000154
257590
Gammaproteobacteria
GGT
Thr
>WENV170567558
FLMP01001784
257590
Gammaproteobacteria
GGT
Thr
>WENV170568161
FLMP01020032
257590
Gammaproteobacteria
GGT
Thr
>WENV170568266
FLMP01026148
257590
Gammaproteobacteria
GGT
Thr
>WENV170568524
FLMP01046899
257590
Gammaproteobacteria
GGT
Thr
>WENV170570258
FLMP01486979
257590
Gammaproteobacteria
GGT
Thr
>WENV170567341
FLMP01000045
262529
Gammaproteobacteria
TAC
Val
>WENV170567861
FLMP01007751
262529
Gammaproteobacteria
TAC
Val
>WENV170568093
FLMP01016865
262529
Gammaproteobacteria
TAC
Val
>WENV170568770
FLMP01076310
188464
Gammaproteobacteria
CCA
Trp
>WENV170569769
FLMP01297359
291145
Gammaproteobacteria
TTC
Glu
>WENV170570136
FLMP01434231
291145
Gammaproteobacteria
TTC
Glu
>WENV170568978
FLMP01104541
170653
Gammaproteobacteria
GAT
Ile
>WENV170570117
FLMP01426126
278464
Gammaproteobacteria
>WENV170567932
FLMP01010509
124882
Gammaproteobacteria
GTA
Tyr
>WENV170567355
FLMP01000123
168201
Gammaproteobacteria
ACG
Arg
>WENV170567409
FLMP01000366
168201
Gammaproteobacteria
ACG
Arg
>WENV170567680
FLMP01003518
168201
Gammaproteobacteria
ACG
Arg
>WENV170570296
FLMP01504375
189826
Gammaproteobacteria
GTC
Asp
>WENV170570361
FLMP01540102
159176
Gammaproteobacteria
GAC
Val
>WENV170570146
FLMP01435567
106850
Gammaproteobacteria
CAA
Leu
>WENV170569544
FLMP01227350
203482
Gammaproteobacteria
TCT
Arg
>WENV170570287
FLMP01500404
261154
Gammaproteobacteria
TGC
Ala
>WENV170568521
FLMP01046846
259519
Gammaproteobacteria
GGC
Ala
>WENV170568671
FLMP01063288
259519
Gammaproteobacteria
GGC
Ala
>WENV170569043
FLMP01113474
259519
Gammaproteobacteria
GGC
Ala
>WENV170569377
FLMP01188645
259519
Gammaproteobacteria
GGC
Ala
>WENV170567442
FLMP01000573
265514
Gammaproteobacteria
TTT
Lys
>WENV170567443
FLMP01000573
265514
Gammaproteobacteria
TTT
Lys
>WENV170567342
FLMP01000045
236600
Gammaproteobacteria
GTC
Asp
>WENV170567388
FLMP01000191
236600
Gammaproteobacteria
GTC
Asp
>WENV170568094
FLMP01016865
236600
Gammaproteobacteria
GTC
Asp
>WENV170568307
FLMP01029318
236600
Gammaproteobacteria
GTC
Asp
>WENV170568320
FLMP01030039
236600
Gammaproteobacteria
GTC
Asp
>WENV170568839
FLMP01085649
236600
Gammaproteobacteria
GTC
Asp
>WENV170567903
FLMP01009285
64842
Gammaproteobacteria
CAA
Leu
>WENV170569782
FLMP01301226
271669
Gammaproteobacteria
GAA
Phe
>WENV170568703
FLMP01068000
159507
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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