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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170668210
LADL02001890
96238
Alphaproteobacteria
GAG
Leu
>WENV170668072
LADL02000799
147089
Alphaproteobacteria
ACG
Arg
>WENV170668364
LADL02003264
95630
Alphaproteobacteria
GTA
Tyr
>WENV170668378
LADL02003416
395846
Alphaproteobacteria
GAC
Val
>WENV170668371
LADL02003333
146875
Alphaproteobacteria
GTG
His
>WENV170668052
LADL02000525
24893
Alphaproteobacteria
GGA
Ser
>WENV170668096
LADL02001014
148353
Alphaproteobacteria
CAT
Met
>WENV170668293
LADL02002551
338282
Alphaproteobacteria
GTT
Asn
>WENV170668074
LADL02000804
96210
Alphaproteobacteria
TAG
Leu
>WENV170668323
LADL02002883
25534
Alphaproteobacteria
CGA
Ser
>WENV170668325
LADL02002910
147879
Alphaproteobacteria
TGG
Pro
>WENV170668058
LADL02000596
150677
Alphaproteobacteria
GTC
Asp
>WENV170668334
LADL02003009
105992
Alphaproteobacteria
TAG
Leu
>WENV170668416
LADL02003669
351511
Alphaproteobacteria
TTG
Gln
>WENV170668247
LADL02002115
194755
Alphaproteobacteria
CAT
Met
>WENV170668063
LADL02000673
192195
Alphaproteobacteria
GTC
Asp
>WENV170668219
LADL02001999
319095
Alphaproteobacteria
TAC
Val
>WENV170668388
LADL02003425
368915
Alphaproteobacteria
GGT
Thr
>WENV170668404
LADL02003535
341164
Alphaproteobacteria
GCC
Gly
>WENV170668351
LADL02003156
59164
Alphaproteobacteria
GAG
Leu
>WENV170668116
LADL02001128
174836
Alphaproteobacteria
TCT
Arg
>WENV170668260
LADL02002197
242540
Alphaproteobacteria
TGC
Ala
>WENV170668124
LADL02001240
254653
Alphaproteobacteria
CCA
Trp
>WENV170668304
LADL02002650
348781
Alphaproteobacteria
GAA
Phe
>WENV170668095
LADL02001003
144972
Alphaproteobacteria
>WENV170668176
LADL02001602
187569
Alphaproteobacteria
CCG
Arg
>WENV170668128
LADL02001263
187569
Alphaproteobacteria
CCG
Arg
>WENV170668258
LADL02002177
147087
Alphaproteobacteria
GTG
His
>WENV170668369
LADL02003291
417644
Alphaproteobacteria
CCC
Gly
>WENV170668208
LADL02001870
318048
Alphaproteobacteria
CCA
Trp
>WENV170668039
LADL02000428
369678
Alphaproteobacteria
GGT
Thr
>WENV170668397
LADL02003509
144969
Alphaproteobacteria
CGG
Pro
>WENV170668336
LADL02003030
339606
Alphaproteobacteria
>WENV170668114
LADL02001128
338331
Alphaproteobacteria
>WENV170668113
LADL02001128
338331
Alphaproteobacteria
>WENV170668279
LADL02002429
114040
Alphaproteobacteria
CAA
Leu
>WENV170668339
LADL02003064
98423
Alphaproteobacteria
CAA
Leu
>WENV170668396
LADL02003494
83323
Alphaproteobacteria
GTA
Tyr
>WENV170668177
LADL02001608
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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