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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170667995
LADL02000049
90449
Alphaproteobacteria
TAA
Leu
>WENV170668014
LADL02000129
27333
Alphaproteobacteria
TGA
Ser
>WENV170668022
LADL02000226
266238
Alphaproteobacteria
CGT
Thr
>WENV170668057
LADL02000591
161262
Alphaproteobacteria
CAT
Met
>WENV170668058
LADL02000596
167093
Alphaproteobacteria
GTC
Asp
>WENV170668073
LADL02000800
263418
Alphaproteobacteria
TTT
Lys
>WENV170668074
LADL02000804
105499
Alphaproteobacteria
TAG
Leu
>WENV170668096
LADL02001014
206052
Alphaproteobacteria
>WENV170668113
LADL02001128
369072
Alphaproteobacteria
>WENV170668114
LADL02001128
369072
Alphaproteobacteria
>WENV170668116
LADL02001128
158728
Alphaproteobacteria
TCT
Arg
>WENV170668127
LADL02001260
214179
Alphaproteobacteria
CCT
Arg
>WENV170668149
LADL02001422
171117
Alphaproteobacteria
>WENV170668150
LADL02001423
50733
Alphaproteobacteria
GGA
Ser
>WENV170668176
LADL02001602
206647
Alphaproteobacteria
CCG
Arg
>WENV170668177
LADL02001608
202065
Alphaproteobacteria
CCT
Arg
>WENV170668188
LADL02001719
277619
Alphaproteobacteria
GAA
Phe
>WENV170668206
LADL02001851
450403
Alphaproteobacteria
CTG
Gln
>WENV170668208
LADL02001870
295849
Alphaproteobacteria
CCA
Trp
>WENV170668225
LADL02002035
160802
Alphaproteobacteria
TGG
Pro
>WENV170668254
LADL02002153
161079
Alphaproteobacteria
CCG
Arg
>WENV170668258
LADL02002177
159475
Alphaproteobacteria
GTG
His
>WENV170668312
LADL02002750
27331
Alphaproteobacteria
CGA
Ser
>WENV170668323
LADL02002883
26487
Alphaproteobacteria
CGA
Ser
>WENV170668324
LADL02002910
33431
Alphaproteobacteria
GCT
Ser
>WENV170668329
LADL02002961
162999
Alphaproteobacteria
>WENV170668364
LADL02003264
105109
Alphaproteobacteria
GTA
Tyr
>WENV170668366
LADL02003266
302791
Alphaproteobacteria
CGT
Thr
>WENV170668369
LADL02003291
449051
Alphaproteobacteria
CCC
Gly
>WENV170668370
LADL02003318
169447
Alphaproteobacteria
CCT
Arg
>WENV170668378
LADL02003416
383423
Alphaproteobacteria
GAC
Val
>WENV170668388
LADL02003425
374148
Alphaproteobacteria
GGT
Thr
>WENV170668391
LADL02003461
28699
Alphaproteobacteria
TGA
Ser
>WENV170668393
LADL02003469
106852
Alphaproteobacteria
TAG
Leu
>WENV170668396
LADL02003494
89763
Alphaproteobacteria
GTA
Tyr
>WENV170668416
LADL02003669
374141
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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