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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170692215
LGOV01000927
169411
Bacillota
TGG
Pro
>WENV170692218
LGOV01000927
169411
Bacillota
TGG
Pro
>WENV170692235
LGOV01001494
268674
Bacillota
TTT
Lys
>WENV170692236
LGOV01001494
376145
Bacillota
CCC
Gly
>WENV170692263
LGOV01001797
370288
Bacillota
TTC
Glu
>WENV170692262
LGOV01001797
259023
Bacillota
>WENV170692348
LGOV01004008
107272
Bacillota
GTA
Tyr
>WENV170692440
LGOV01007583
169404
Bacillota
CAT
Met
>WENV170692551
LGOV01013446
470934
Bacillota
TCC
Gly
>WENV170692555
LGOV01013446
268674
Bacillota
TTT
Lys
>WENV170692608
LGOV01016271
175527
Bacillota
GTC
Asp
>WENV170692609
LGOV01016271
268675
Bacillota
TGT
Thr
>WENV170692610
LGOV01016271
107272
Bacillota
GTA
Tyr
>WENV170692630
LGOV01017532
377600
Bacillota
GCA
Cys
>WENV170692652
LGOV01019615
169725
Bacillota
TGG
Pro
>WENV170692724
LGOV01024455
171593
Bacillota
TGG
Pro
>WENV170692717
LGOV01024455
449046
Bacillota
>WENV170692955
LGOV01053247
259252
Bacillota
TGT
Thr
>WENV170692996
LGOV01058449
370288
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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