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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180127586
OATA01002229
235146
Actinomycetota
CGT
Thr
>WENV180127039
OATA01000280
119475
Actinomycetota
TAA
Leu
>WENV180127798
OATA01005420
235347
Actinomycetota
GGC
Ala
>WENV180127799
OATA01005420
235347
Actinomycetota
GGC
Ala
>WENV180127617
OATA01002484
166493
Actinomycetota
CTT
Lys
>WENV180127756
OATA01004470
166493
Actinomycetota
CTT
Lys
>WENV180127959
OATA01014903
235153
Actinomycetota
CCT
Arg
>WENV180127261
OATA01000702
144589
Actinomycetota
ACG
Arg
>WENV180127262
OATA01000702
144589
Actinomycetota
ACG
Arg
>WENV180127836
OATA01006562
16400
Actinomycetota
GAG
Leu
>WENV180127037
OATA01000277
37070
Actinomycetota
CGA
Ser
>WENV180127737
OATA01004225
144600
Actinomycetota
TGG
Pro
>WENV180127650
OATA01002837
235092
Actinomycetota
CCG
Arg
>WENV180127916
OATA01009619
235194
Actinomycetota
GTG
His
>WENV180127782
OATA01005050
158720
Actinomycetota
ACG
Arg
>WENV180127781
OATA01005050
158720
Actinomycetota
ACG
Arg
>WENV180127684
OATA01003330
245301
Actinomycetota
GCC
Gly
>WENV180127755
OATA01004441
411601
Actinomycetota
CCC
Gly
>WENV180127352
OATA01000986
144826
Actinomycetota
GGG
Pro
>WENV180127637
OATA01002559
23370
Actinomycetota
GCT
Ser
>WENV180127931
OATA01010717
174149
Actinomycetota
GAT
Ile
>WENV180127725
OATA01004023
338239
Actinomycetota
TTC
Glu
>WENV180127304
OATA01000840
338239
Actinomycetota
TTC
Glu
>WENV180127038
OATA01000277
16219
Actinomycetota
GCT
Ser
>WENV180127932
OATA01010717
235174
Actinomycetota
TGC
Ala
>WENV180127550
OATA01001934
235174
Actinomycetota
TGC
Ala
>WENV180127092
OATA01000355
235174
Actinomycetota
TGC
Ala
>WENV180127012
OATA01000256
235101
Actinomycetota
TTT
Lys
>WENV180127316
OATA01000858
121510
Actinomycetota
TAA
Leu
>WENV180127698
OATA01003552
356045
Actinomycetota
GAC
Val
>WENV180127303
OATA01000840
144625
Actinomycetota
GTC
Asp
>WENV180127814
OATA01005969
153948
Actinomycetota
GGG
Pro
>WENV180127848
OATA01007008
44855
Actinomycetota
TGA
Ser
>WENV180127748
OATA01004295
145345
Actinomycetota
TAC
Val
>WENV180127946
OATA01013148
235199
Actinomycetota
CAC
Val
>WENV180127699
OATA01003552
235199
Actinomycetota
CAC
Val
>WENV180127773
OATA01004924
44862
Actinomycetota
CGA
Ser
>WENV180126812
OATA01000085
198659
Actinomycetota
TAC
Val
>WENV180127704
OATA01003687
413665
Actinomycetota
TTG
Gln
>WENV180127812
OATA01005907
254857
Actinomycetota
CCG
Arg
>WENV180127638
OATA01002606
16223
Actinomycetota
GAG
Leu
>WENV180127076
OATA01000328
144593
Actinomycetota
TAT
Ile
>WENV180127854
OATA01007222
113703
Actinomycetota
TAG
Leu
>WENV180127919
OATA01009715
144700
Actinomycetota
CAT
Met
>WENV180127605
OATA01002377
144636
Actinomycetota
GAT
Ile
>WENV180127547
OATA01001860
158375
Actinomycetota
CAT
Met
>WENV180127880
OATA01007934
243671
Actinomycetota
CTC
Glu
>WENV180127450
OATA01001366
45147
Actinomycetota
CGA
Ser
>WENV180127315
OATA01000856
98279
Actinomycetota
GTA
Tyr
>WENV180127881
OATA01007934
338148
Actinomycetota
CTG
Gln
>WENV180127162
OATA01000495
338148
Actinomycetota
CTG
Gln
>WENV180127483
OATA01001534
235148
Actinomycetota
GTT
Asn
>WENV180127002
OATA01000245
235148
Actinomycetota
GTT
Asn
>WENV180127995
OATA01018995
237792
Actinomycetota
CCT
Arg
>WENV180127754
OATA01004438
113702
Actinomycetota
TAA
Leu
>WENV180127598
OATA01002283
176456
Actinomycetota
TCT
Arg
>WENV180127362
OATA01000996
144825
Actinomycetota
CAT
Met
>WENV180128130
OATA01049896
338139
Actinomycetota
GTT
Asn
>WENV180127510
OATA01001679
235348
Actinomycetota
CCT
Arg
>WENV180127465
OATA01001391
237794
Actinomycetota
CCG
Arg
>WENV180127417
OATA01001222
411554
Actinomycetota
CCC
Gly
>WENV180127148
OATA01000438
411554
Actinomycetota
CCC
Gly
>WENV180127575
OATA01002129
113601
Actinomycetota
TAG
Leu
>WENV180127874
OATA01007666
144595
Actinomycetota
CAA
Leu
>WENV180127471
OATA01001462
144595
Actinomycetota
CAA
Leu
>WENV180127124
OATA01000401
144595
Actinomycetota
CAA
Leu
>WENV180127001
OATA01000245
145343
Actinomycetota
GGG
Pro
>WENV180127293
OATA01000778
235149
Actinomycetota
CCT
Arg
>WENV180127849
OATA01007163
51286
Actinomycetota
TGA
Ser
>WENV180127966
OATA01016039
414234
Actinomycetota
CTG
Gln
>WENV180127853
OATA01007222
235121
Actinomycetota
CGT
Thr
>WENV180127574
OATA01002129
235121
Actinomycetota
CGT
Thr
>WENV180127479
OATA01001516
47164
Actinomycetota
GGA
Ser
>WENV180127380
OATA01001084
47164
Actinomycetota
GGA
Ser
>WENV180127125
OATA01000401
144635
Actinomycetota
TGG
Pro
>WENV180127467
OATA01001399
61501
Actinomycetota
CAG
Leu
>WENV180127543
OATA01001847
80622
Actinomycetota
CAG
Leu
>WENV180127531
OATA01001817
80622
Actinomycetota
CAG
Leu
>WENV180127776
OATA01004950
44851
Actinomycetota
TGA
Ser
>WENV180127905
OATA01008693
163948
Actinomycetota
CAT
Met
>WENV180128146
OATA01057288
235173
Actinomycetota
GGC
Ala
>WENV180127851
OATA01007202
235173
Actinomycetota
GGC
Ala
>WENV180127442
OATA01001313
235173
Actinomycetota
GGC
Ala
>WENV180127093
OATA01000355
235173
Actinomycetota
GGC
Ala
>WENV180127695
OATA01003532
243162
Actinomycetota
GTT
Asn
>WENV180127694
OATA01003532
243162
Actinomycetota
GTT
Asn
>WENV180127693
OATA01003532
243162
Actinomycetota
GTT
Asn
>WENV180127692
OATA01003532
243162
Actinomycetota
GTT
Asn
>WENV180127439
OATA01001302
243162
Actinomycetota
GTT
Asn
>WENV180127705
OATA01003712
144660
Actinomycetota
TAC
Val
>WENV180127613
OATA01002452
278447
Actinomycetota
GTG
His
>WENV180128145
OATA01057288
267574
Actinomycetota
CAC
Val
>WENV180127918
OATA01009715
95593
Actinomycetota
>WENV180127035
OATA01000277
95593
Actinomycetota
>WENV180127711
OATA01003761
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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